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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3162 | - | - | 100% (239) | Integrase, catalytic region |
| M. thermoresistible (build 8) | TH_4372 | - | 7e-59 | 51.10% (227) | PUTATIVE Integrase, catalytic region |
| M. thermoresistible (build 8) | TH_3317 | - | 1e-24 | 32.44% (225) | PUTATIVE Integrase, catalytic region |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2838c | - | 5e-29 | 33.92% (227) | transposase |
| M. gilvum PYR-GCK | Mflv_4642 | - | 4e-37 | 39.21% (227) | integrase catalytic subunit |
| M. tuberculosis H37Rv | Rv3475 | - | 5e-29 | 33.92% (227) | transposase IS6110 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2088 | - | 2e-32 | 36.28% (215) | transposase |
| M. marinum M | MMAR_3786 | - | 8e-30 | 35.43% (223) | transposase |
| M. avium 104 | MAV_3271 | - | 2e-24 | 32.20% (205) | transposase |
| M. smegmatis MC2 155 | MSMEG_6888 | - | 6e-34 | 36.79% (212) | transposase subunit |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5060 | - | 6e-59 | 51.10% (227) | integrase catalytic subunit |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3162|M.thermoresistible__bu --------------------------------------------------
Mvan_5060|M.vanbaalenii_PYR-1 --------------------------------------MSRFELIAAECA
Mflv_4642|M.gilvum_PYR-GCK -------------------------------------MSQKYAFIAAEHA
MAB_2088|M.abscessus_ATCC_1997 --------------------------------------------------
MSMEG_6888|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3786|M.marinum_M ---------------------------------------MPRQYSSSVRR
Mb2838c|M.bovis_AF2122/97 --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv AEALAAGQRRIAKGERDFKDRVGFLRGRARPASTLITRFIADHQGHREGP
MAV_3271|M.avium_104 --------------------------------------------------
TH_3162|M.thermoresistible__bu --------------------------------------------------
Mvan_5060|M.vanbaalenii_PYR-1 D--------HDIATLTELLGVSRSGYYAWEARQRRTEPTARQQWRRD---
Mflv_4642|M.gilvum_PYR-GCK DGATFAGMAPTIVQMLKWLGVSKSGFYEWWGRP----ASAAMCRREE---
MAB_2088|M.abscessus_ATCC_1997 -------------MTRRVLKLARQPYYRWRANPITDAELVEAYR------
MSMEG_6888|M.smegmatis_MC2_155 -------------MTCRVLKLARQPYYRWRANPITDAEIIEAYR------
MMAR_3786|M.marinum_M QIVSRLRVGEPVAVVAAETGVCQATLFRWKRQALIDAGVIEGTPSVEADE
Mb2838c|M.bovis_AF2122/97 ------------------MPIAPSTYYDHINREPSRRELRDGELK-----
Rv3475|M.tuberculosis_H37Rv DGLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELK-----
MAV_3271|M.avium_104 --------------------MALSTYYDAKARVPSARALRDAVLG-----
TH_3162|M.thermoresistible__bu ------------------LDAKVAAFHKASDGVYGAPRILADLREDG---
Mvan_5060|M.vanbaalenii_PYR-1 ------------------LEVKILAHWKESKRTYGSPRITADLHAAG---
Mflv_4642|M.gilvum_PYR-GCK ------------------LKLKIAALFTSFGAVYGYRRIHAELVRAG---
MAB_2088|M.abscessus_ATCC_1997 --------------------ANALFDAHGEDPEFGYRYLVEEAREAG---
MSMEG_6888|M.smegmatis_MC2_155 --------------------ANALFDAHRDDPEFGYRYLVEEARDAG---
MMAR_3786|M.marinum_M LAAAHKRIAQLEAELALTRDACDLFNEEAVVPPKRRRAITEGLIARGHSA
Mb2838c|M.bovis_AF2122/97 --------------------EHISRVHAANYGVYGARKVWLTLNREG---
Rv3475|M.tuberculosis_H37Rv --------------------EHISRVHAANYGVYGARKVWLTLNREG---
MAV_3271|M.avium_104 --------------------PALCQLWKDNYCVYGARKLWKTARRDG---
: *
TH_3162|M.thermoresistible__bu -------------------EKVSRKTVAASLRRQGLAGISPRTFAPVTT-
Mvan_5060|M.vanbaalenii_PYR-1 -------------------VSVSVNTVAAIMAEMGIEGISPRTFKVKTT-
Mflv_4642|M.gilvum_PYR-GCK -------------------ERVGPELVRTLMRELNLVALQPKPYKRTTI-
MAB_2088|M.abscessus_ATCC_1997 -------------------EPMAERTAWRICSQQQLWSVFGKKRGKNGK-
MSMEG_6888|M.smegmatis_MC2_155 -------------------ETMAERTAWRICSQNRLWSVFGKKRGKNGK-
MMAR_3786|M.marinum_M RSACRVTGLARSLLQYHRRRLVPDREVRRLIVADTITEIYQRSRGTYGRK
Mb2838c|M.bovis_AF2122/97 -------------------IEVARCTVERLMTKLGLSGTTRGKARRTTI-
Rv3475|M.tuberculosis_H37Rv -------------------IEVARCTVERLMTKLGLSGTTRGKARRTTI-
MAV_3271|M.avium_104 -------------------HDVGRDQVARLMRAAGIEGVRRGKRVRTTK-
: . :
TH_3162|M.thermoresistible__bu --------------------------------------IVDLDTPVPKDL
Mvan_5060|M.vanbaalenii_PYR-1 --------------------------------------VVDPAASFPPDR
Mflv_4642|M.gilvum_PYR-GCK --------------------------------------AGESATAVP-DL
MAB_2088|M.abscessus_ATCC_1997 -----------------------------------------PGPPVHDDL
MSMEG_6888|M.smegmatis_MC2_155 -----------------------------------------VGPPVHDDL
MMAR_3786|M.marinum_M RVRAALLADYDMNVNHKLVNSIMSEHGLYGLPRHGRRKPNLIGVHTPVDL
Mb2838c|M.bovis_AF2122/97 ---------------------------------------ADPATARPADL
Rv3475|M.tuberculosis_H37Rv ---------------------------------------ADPATARPADL
MAV_3271|M.avium_104 ---------------------------------------ADPAAARHPDL
*
TH_3162|M.thermoresistible__bu VNRRFDVGELDRVWTSDITYLRTGEGWLYLCAVRDGCSRRVIGWAIDDHM
Mvan_5060|M.vanbaalenii_PYR-1 VGRIFDQGRLDAVWTSDITYLTCGEGDAYLCAIRDEHSRRVLGWSVADHM
Mflv_4642|M.gilvum_PYR-GCK VARDFTADRPGVKLVGDITYIRTWAGWLYLATVIDCFNKEVIGYAMADHM
MAB_2088|M.abscessus_ATCC_1997 VQRDFTAETPNMLWLSDITEHYTGDGKLYLCAIKDAFSNRIVGYSIDSRM
MSMEG_6888|M.smegmatis_MC2_155 VERDFTAGGPNQLWLSDITEHRTDEGKLYLCAIKDVFSNRIVGYSIDARM
MMAR_3786|M.marinum_M INRRFTATKPNELWCTDITEHPARDGKVYCCAILDCFSRMIVARTFSTTA
Mb2838c|M.bovis_AF2122/97 VQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTM
Rv3475|M.tuberculosis_H37Rv VQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDAYARRILGWRVASTM
MAV_3271|M.avium_104 VHRNFAAAAPNQLWVTDLTFVPTWAGVAYVCFIIDAHSRMIVGWRVASHM
: * * . *:* * * . : * . ::. .
TH_3162|M.thermoresistible__bu HTDLVESAVAMAVAMRGQL----AEQVVLHADRGCQFTSAQLARFSRGHN
Mvan_5060|M.vanbaalenii_PYR-1 RTELVEQAVDAAVFTRGGS----VAGTILHSDRGSQYTSHDLAKACSDHG
Mflv_4642|M.gilvum_PYR-GCK RTELATGALEMAARN-HAL----EPGCIMHTDRGTQYTSTDYAIKIADLD
MAB_2088|M.abscessus_ATCC_1997 KSRLATAALRNAVGRRGVV----AG-CVVHTDRGSQFRSRKFVQALHHHG
MSMEG_6888|M.smegmatis_MC2_155 KSRLATTALSSAVARRGDV----AG-CILHSDRGSQFRSRRFVRVLGRHE
MMAR_3786|M.marinum_M DTALVNNAVNMAVDHRNRS----GP-TILHADHGTQFTSWSFGENMRRWG
Mb2838c|M.bovis_AF2122/97 ATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAG
Rv3475|M.tuberculosis_H37Rv ATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQYTSIRFSERLAEAG
MAV_3271|M.avium_104 RTSMVLDALEMARWSRG----TTLQDLICHSDAGSQFTSIRYGERLAEIG
: :. *: * : *:* * *: *
TH_3162|M.thermoresistible__bu LARSVGRTGVCWDNAQHESFWGTMKVEFYD----RHLWPTKAAAKLAVGD
Mvan_5060|M.vanbaalenii_PYR-1 LRRSMGATGICWDNAGSESLWSTVKHEYYK----RHAFTTYANLTAGLDN
Mflv_4642|M.gilvum_PYR-GCK MRASLGRTGICWDNALAESFFAALKNERVH----HMVYPTRKKARADIAR
MAB_2088|M.abscessus_ATCC_1997 MVGSMGRVGAAGDNAAMESFFSLLQKNVLD----RRRWATREELRIAIVT
MSMEG_6888|M.smegmatis_MC2_155 MVGSMGRVGAAGDNAAMESFFALLQKNVLD----RRRWRTREELRIAIVT
MMAR_3786|M.marinum_M LLGSFGTVGDCFDNAAMESFWARLQVELLN----TRKWATTIELAAAMAD
Mb2838c|M.bovis_AF2122/97 IQPSVGAVGSSYDNALAETINGLYKTELIK-PGK--PWRSIEDVELATAR
Rv3475|M.tuberculosis_H37Rv IQPSVGAVGSSYDNALAETINGLYKTELIK-PGK--PWRSIEDVELATAR
MAV_3271|M.avium_104 AVPSIGTVGDSFDNALAETVNGYYKAELIYGPARSRPWKTVEDVELATLS
*.* .* . *** *:. . : : : :
TH_3162|M.thermoresistible__bu WIERVYNRRRRPSAT---------PAAAATQRSA-------
Mvan_5060|M.vanbaalenii_PYR-1 YLH-YYNHDRRHSSLGMISPIDFEIAARINQQSS-------
Mflv_4642|M.gilvum_PYR-GCK YIELFYNRRRLHSALGYRTPHEVRIEYMNSQLAA-------
MAB_2088|M.abscessus_ATCC_1997 WIERTYHRRRRQGALGRLTPVEYEAIMTTTASQAA------
MSMEG_6888|M.smegmatis_MC2_155 WIERTYHRRRRQAGLGRLTPIEFEAIMTTPASQAA------
MMAR_3786|M.marinum_M YIDNFYNIERRHSYLGNISPTEFETLWTSTYSIPQLA----
Mb2838c|M.bovis_AF2122/97 WVD-WFNHRRLYQYCGDVPPVELEAAYYAQR--QRPAAG--
Rv3475|M.tuberculosis_H37Rv WVD-WFNHRRLYQYCGDVPPVELEAAYYAQR--QRPAAG--
MAV_3271|M.avium_104 WVH-WHNTSRLHSYLGDIPPTEFEAAFYDAYRTDQPLIGIQ
::. .: *