For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_3786 (-)

annotation: transposase
coordinates: 4675406 - 4676575
length: 389

MPRQYSSSVRRQIVSRLRVGEPVAVVAAETGVCQATLFRWKRQALIDAGVIEGTPSVEADELAAAHKRIA
QLEAELALTRDACDLFNEEAVVPPKRRRAITEGLIARGHSARSACRVTGLARSLLQYHRRRLVPDREVRR
LIVADTITEIYQRSRGTYGRKRVRAALLADYDMNVNHKLVNSIMSEHGLYGLPRHGRRKPNLIGVHTPVD
LINRRFTATKPNELWCTDITEHPARDGKVYCCAILDCFSRMIVARTFSTTADTALVNNAVNMAVDHRNRS
GPTILHADHGTQFTSWSFGENMRRWGLLGSFGTVGDCFDNAAMESFWARLQVELLNTRKWATTIELAAAM
ADYIDNFYNIERRHSYLGNISPTEFETLWTSTYSIPQLA
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_3786--100% (389)transposase
M. marinum MMMAR_2548-5e-2329.34% (259) transposase, ISMyma03_aa2
M. marinum MMMAR_2532-5e-2329.34% (259) transposase, ISMyma03_aa2

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2838c-1e-2629.10% (268) transposase
M. gilvum PYR-GCKMflv_3195-2e-3539.60% (202) integrase catalytic subunit
M. tuberculosis H37RvRv3475-1e-2629.10% (268) transposase IS6110
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2088-2e-3640.10% (202) transposase
M. avium 104MAV_1454-3e-3334.93% (272) transposase
M. smegmatis MC2 155MSMEG_6888-2e-3735.56% (270) transposase subunit
M. thermoresistible (build 8)TH_4372-8e-3333.94% (277) PUTATIVE Integrase, catalytic region
M. ulcerans Agy99MUL_2306-5e-0531.58% (76) transposase
M. vanbaalenii PYR-1Mvan_5959-1e-3640.10% (202) integrase catalytic subunit

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3195|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_5959|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_6888|M.smegmatis_MC2_155      --------------------------------------------------
MAB_2088|M.abscessus_ATCC_1997      --------------------------------------------------
MUL_2306|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3786|M.marinum_M               MPRQYSSSVRRQIVSRLRVGEPVAVVAAETGVCQATLFRWKRQALIDAGV
Mb2838c|M.bovis_AF2122/97           --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv         -------------------------------------------------A
MAV_1454|M.avium_104                --------------------------------------------------
TH_4372|M.thermoresistible__bu      --------------------------------------------------
                                                                                      

Mflv_3195|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_5959|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_6888|M.smegmatis_MC2_155      --------------------------------------------------
MAB_2088|M.abscessus_ATCC_1997      --------------------------------------------------
MUL_2306|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3786|M.marinum_M               IEGTPSVEADELAAAHKRIAQLEAELALTRDACDLFNEEAVVPPKRRRAI
Mb2838c|M.bovis_AF2122/97           --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv         EALAAGQRRIAKGERDFKDRVGFLRGRARPASTLITRFIADHQGHREGPD
MAV_1454|M.avium_104                --------------------------------------------------
TH_4372|M.thermoresistible__bu      ---------------------------------------------VSRFE
                                                                                      

Mflv_3195|M.gilvum_PYR-GCK          MKELAADGIPVAVTCRVLKLSRQPYYRWLAD----PITEAELIEAYRANA
Mvan_5959|M.vanbaalenii_PYR-1       MKELAADGIPVAVTCRVLKLSRQPYYRWLAD----PVTDAELVEAYRTNA
MSMEG_6888|M.smegmatis_MC2_155      ------------MTCRVLKLARQPYYRWRAN----PITDAEIIEAYRANA
MAB_2088|M.abscessus_ATCC_1997      ------------MTRRVLKLARQPYYRWRAN----PITDAELVEAYRANA
MUL_2306|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3786|M.marinum_M               TEGLIARGHSARSACRVTGLARSLLQYHRRR----LVPDREVRRLIVADT
Mb2838c|M.bovis_AF2122/97           -----------------MPIAPSTYYDHINR----EPSRRELRDGELKEH
Rv3475|M.tuberculosis_H37Rv         GLRWGVESICTQLTELGVPIAPSTYYDHINR----EPSRRELRDGELKEH
MAV_1454|M.avium_104                -------------------MALSTYYDTKAR----VPSARALRDAVLGPA
TH_4372|M.thermoresistible__bu      LIAAECAHHDVSKLAELLGVSRSGYYAWAARQRRVELSPRQQWRRDLEVK
                                                                                      

Mflv_3195|M.gilvum_PYR-GCK          LFDAHADDPEFG-YRYLVEEARDAGEPMAERTAWR--ICSQNRLWSVF-G
Mvan_5959|M.vanbaalenii_PYR-1       LVNAHADDPEFG-YRYLVEEAREAGEPMAERTAWR--ICSQNRLWSVF-G
MSMEG_6888|M.smegmatis_MC2_155      LFDAHRDDPEFG-YRYLVEEARDAGETMAERTAWR--ICSQNRLWSVF-G
MAB_2088|M.abscessus_ATCC_1997      LFDAHGEDPEFG-YRYLVEEAREAGEPMAERTAWR--ICSQQQLWSVF-G
MUL_2306|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3786|M.marinum_M               ITEIYQRSRGTY-GRKRVRAALLADYDMNVNHKLVNSIMSEHGLYGLP-R
Mb2838c|M.bovis_AF2122/97           ISRVHAANYGVYGARKVWLTLNREGIEVARCTVER--LMTKLGLSGTT-R
Rv3475|M.tuberculosis_H37Rv         ISRVHAANYGVYGARKVWLTLNREGIEVARCTVER--LMTKLGLSGTT-R
MAV_1454|M.avium_104                LCQLWKDNYCVYGARKLWKTARREGHDVGRDQVAR--LMRAAGIEGVR-R
TH_4372|M.thermoresistible__bu      ILAHWQASGRTYGSPRITADLHAEGVGVSENTVAK--IMAEMGIEGISPR
                                                                                      

Mflv_3195|M.gilvum_PYR-GCK          KKRGKNGKVGPPVH--DDLVERDFTAEGPNQLWLSDITEHRTGEGKLYLC
Mvan_5959|M.vanbaalenii_PYR-1       KKRGKSGKVGPPVH--DDLVQRDFTADAPNQLWLSDITEHRTDEGKLYLC
MSMEG_6888|M.smegmatis_MC2_155      KKRGKNGKVGPPVH--DDLVERDFTAGGPNQLWLSDITEHRTDEGKLYLC
MAB_2088|M.abscessus_ATCC_1997      KKRGKNGKPGPPVH--DDLVQRDFTAETPNMLWLSDITEHYTGDGKLYLC
MUL_2306|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3786|M.marinum_M               HGRRKPNLIGVHTP--VDLINRRFTATKPNELWCTDITEHPARDGKVYCC
Mb2838c|M.bovis_AF2122/97           GKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVA
Rv3475|M.tuberculosis_H37Rv         GKARRTTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVA
MAV_1454|M.avium_104                GKRVRTTKPDPAAARHPDLVKRNFTATAPNQLWVTDLTFVPTWAGVAYVC
TH_4372|M.thermoresistible__bu      TFKVKTTQVDPTASFPPDRVGRAFDQGRLDAVWTSDITYLTCGEGDAYLC
                                                                                      

Mflv_3195|M.gilvum_PYR-GCK          AIKDVFSNRIVGYSIDSRMKSQLAIRALHSAVARRGD-----VAGCILHS
Mvan_5959|M.vanbaalenii_PYR-1       AIKDVFSNRIVGYSIDSRMKSRLATRALHSAVARRGD-----VAGCIVHT
MSMEG_6888|M.smegmatis_MC2_155      AIKDVFSNRIVGYSIDARMKSRLATTALSSAVARRGD-----VAGCILHS
MAB_2088|M.abscessus_ATCC_1997      AIKDAFSNRIVGYSIDSRMKSRLATAALRNAVGRRGV-----VAGCVVHT
MUL_2306|M.ulcerans_Agy99           ---------MVG--------------------------------------
MMAR_3786|M.marinum_M               AILDCFSRMIVARTFSTTADTALVNNAVNMAVDHRNR-----SGPTILHA
Mb2838c|M.bovis_AF2122/97           FVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHT
Rv3475|M.tuberculosis_H37Rv         FVTDAYARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHT
MAV_1454|M.avium_104                FIIDAYSRMIVGWRVASHMRTSMVLDALEMARWSRGN----MLPGLRCHS
TH_4372|M.thermoresistible__bu      AIRDEHSRRVLGWSLADHMRTELVEAAVDAAVFTRAG----HVAGTVMHS
                                             ::.                                      

Mflv_3195|M.gilvum_PYR-GCK          DRGSQFRSRKFVHALNHHEMVGSMGRVGAAGDNAAMESFFSLLQKNVLD-
Mvan_5959|M.vanbaalenii_PYR-1       DRGSQFRSRRFVHALGHYEMVGSMGRVGAAGDNAAMESFFSLLQKNVLD-
MSMEG_6888|M.smegmatis_MC2_155      DRGSQFRSRRFVRVLGRHEMVGSMGRVGAAGDNAAMESFFALLQKNVLD-
MAB_2088|M.abscessus_ATCC_1997      DRGSQFRSRKFVQALHHHGMVGSMGRVGAAGDNAAMESFFSLLQKNVLD-
MUL_2306|M.ulcerans_Agy99           -------------------TVGAMGRVQAAGDNAAMASFFSLLRKNVLG-
MMAR_3786|M.marinum_M               DHGTQFTSWSFGENMRRWGLLGSFGTVGDCFDNAAMESFWARLQVELLN-
Mb2838c|M.bovis_AF2122/97           DRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK-
Rv3475|M.tuberculosis_H37Rv         DRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK-
MAV_1454|M.avium_104                DAGSQFTSIRYGERLAEIGAVPSIGTVGDSFDNALAETVNGYYKAELIYG
TH_4372|M.thermoresistible__bu      DRGSQFTSYDMAQACTRHGLLRSMGATGICWDNAGSESLWSTVKHEYYK-
                                                          :.* .  . ***   :. .  : :    

Mflv_3195|M.gilvum_PYR-GCK          ---RRRWDTREQLRIAIVTWIERTYHRRRRQSGLGRLTPIEFEAIMTTPA
Mvan_5959|M.vanbaalenii_PYR-1       ---RRRWATREELRIAIVTWIERTYHRRRRQSGLGRLTPIEFEAIMTTPA
MSMEG_6888|M.smegmatis_MC2_155      ---RRRWRTREELRIAIVTWIERTYHRRRRQAGLGRLTPIEFEAIMTTPA
MAB_2088|M.abscessus_ATCC_1997      ---RRRWATREELRIAIVTWIERTYHRRRRQGALGRLTPVEYEAIMTTTA
MUL_2306|M.ulcerans_Agy99           ---RRRWETREHLRIAIATWTETHLRPPPSASRSWPVAPVRFEAIMISRA
MMAR_3786|M.marinum_M               ---TRKWATTIELAAAMADYIDNFYNIERRHSYLGNISPTEFETLWTSTY
Mb2838c|M.bovis_AF2122/97           PGK--PWRSIEDVELATARWVD-WFNHRRLYQYCGDVPPVELEAAYYAQR
Rv3475|M.tuberculosis_H37Rv         PGK--PWRSIEDVELATARWVD-WFNHRRLYQYCGDVPPVELEAAYYAQR
MAV_1454|M.avium_104                PARTGPWKTVEDVELATLSWVY-WHNTSRLHSYLGDIPPAEFEAAFYDAY
TH_4372|M.thermoresistible__bu      ---RHAFTTYANLTAGLDNYIR-FYNHERRHSSLGMISPIDFDLSLDILL
                                          : :  .:  .   :     .          :.*   :       

Mflv_3195|M.gilvum_PYR-GCK          SQAA------
Mvan_5959|M.vanbaalenii_PYR-1       SQAA------
MSMEG_6888|M.smegmatis_MC2_155      SQAA------
MAB_2088|M.abscessus_ATCC_1997      SQAA------
MUL_2306|M.ulcerans_Agy99           IQAA------
MMAR_3786|M.marinum_M               SIPQLA----
Mb2838c|M.bovis_AF2122/97           --QRPAAG--
Rv3475|M.tuberculosis_H37Rv         --QRPAAG--
MAV_1454|M.avium_104                RTDQPLIGIQ
TH_4372|M.thermoresistible__bu      STQV------