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MYPLVLDLAADGVPVTVTCRVLGFSTQAFYRWRKAPVSQRDWDDAHLINAARNIHADDPAFGYRFIADEL PAHGITAGENRVARLCSQERIWSIFAKKRGLNRRSGPPVHDDLVQRQFSTHAPNQVWLADITEHRTDEGK LYLCALKDVYSNRIVGYSIDSRMKSSLAVAALEHAVALRSPVATIVHSDRGSQFRSRKFVHALSHNGLHG SMGRVGACGDNAAMESFFALLQRNVLDRRRWTTRAELRLAIVTWIERTYHRRRRQRALGRLTPIEFELLH TPVATAA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1249 | - | - | 100% (288) | ISMsm7, transposase orfB |
| M. smegmatis MC2 155 | MSMEG_4105 | - | e-104 | 66.08% (286) | transposase subunit |
| M. smegmatis MC2 155 | MSMEG_4089 | - | e-104 | 66.08% (286) | transposase subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2838c | - | 3e-24 | 30.98% (255) | transposase |
| M. gilvum PYR-GCK | Mflv_3195 | - | 1e-107 | 66.32% (285) | integrase catalytic subunit |
| M. tuberculosis H37Rv | Rv3475 | - | 3e-24 | 30.98% (255) | transposase IS6110 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2088 | - | 8e-99 | 63.24% (272) | transposase |
| M. marinum M | MMAR_3786 | - | 1e-33 | 32.85% (277) | transposase |
| M. avium 104 | MAV_3271 | - | 4e-24 | 33.78% (225) | transposase |
| M. thermoresistible (build 8) | TH_3162 | - | 2e-33 | 43.83% (162) | PUTATIVE Integrase, catalytic region |
| M. ulcerans Agy99 | MUL_2306 | - | 2e-14 | 50.68% (73) | transposase |
| M. vanbaalenii PYR-1 | Mvan_5959 | - | 1e-108 | 67.72% (285) | integrase catalytic subunit |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3195|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5959|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2088|M.abscessus_ATCC_1997 --------------------------------------------------
MUL_2306|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 --------------------------------------------------
MMAR_3786|M.marinum_M MPRQYSSSVRRQIVSRLRVGEPVAVVAAETGVCQATLFRWKRQALIDAGV
Mb2838c|M.bovis_AF2122/97 --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv -------------------------------------------------A
MAV_3271|M.avium_104 --------------------------------------------------
TH_3162|M.thermoresistible__bu --------------------------------------------------
Mflv_3195|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5959|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2088|M.abscessus_ATCC_1997 --------------------------------------------------
MUL_2306|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 ---------------------------------------------MMYPL
MMAR_3786|M.marinum_M IEGTPSVEADELAAAHKRIAQLEAELALTRDACDLFNEEAVVPPKRRRAI
Mb2838c|M.bovis_AF2122/97 --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv EALAAGQRRIAKGERDFKDRVGFLRGRARPASTLITRFIADHQGHREGPD
MAV_3271|M.avium_104 --------------------------------------------------
TH_3162|M.thermoresistible__bu --------------------------------------------------
Mflv_3195|M.gilvum_PYR-GCK MKELAADGIPVAVTCRVLKLSRQPYYRWLADPITEAELIEAYRANALFDA
Mvan_5959|M.vanbaalenii_PYR-1 MKELAADGIPVAVTCRVLKLSRQPYYRWLADPVTDAELVEAYRTNALVNA
MAB_2088|M.abscessus_ATCC_1997 ------------MTRRVLKLARQPYYRWRANPITDAELVEAYRANALFDA
MUL_2306|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 VLDLAADGVPVTVTCRVLGFSTQAFYRWRKAPVSQRDWDDAHLINAARNI
MMAR_3786|M.marinum_M TEGLIARGHSARSACRVTGLARSLLQYHRRRLVPDREVRRLIVADTITEI
Mb2838c|M.bovis_AF2122/97 -----------------MPIAPSTYYDHINREPSRRELRDGELKEHISRV
Rv3475|M.tuberculosis_H37Rv GLRWGVESICTQLTELGVPIAPSTYYDHINREPSRRELRDGELKEHISRV
MAV_3271|M.avium_104 -------------------MALSTYYDAKARVPSARALRDAVLGPALCQL
TH_3162|M.thermoresistible__bu ------------------------------------------LDAKVAAF
Mflv_3195|M.gilvum_PYR-GCK HADDPEFG--YRYLVEEARDAGEPMAERTAWRICSQNRLWSVF---GKKR
Mvan_5959|M.vanbaalenii_PYR-1 HADDPEFG--YRYLVEEAREAGEPMAERTAWRICSQNRLWSVF---GKKR
MAB_2088|M.abscessus_ATCC_1997 HGEDPEFG--YRYLVEEAREAGEPMAERTAWRICSQQQLWSVF---GKKR
MUL_2306|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 HADDPAFG--YRFIADELPAHGITAGENRVARLCSQERIWSIF---AKKR
MMAR_3786|M.marinum_M YQRSRGTYGRKRVRAALLADYDMNVNHKLVNSIMSEHGLYGLP---RHGR
Mb2838c|M.bovis_AF2122/97 HAANYGVYG-ARKVWLTLNREGIEVARCTVERLMTKLGLSGTT-RGKARR
Rv3475|M.tuberculosis_H37Rv HAANYGVYG-ARKVWLTLNREGIEVARCTVERLMTKLGLSGTT-RGKARR
MAV_3271|M.avium_104 WKDNYCVYG-ARKLWKTARRDGHDVGRDQVARLMRAAGIEGVR-RGKRVR
TH_3162|M.thermoresistible__bu HKASDGVYG-APRILADLREDGEKVSRKTVAASLRRQGLAGISPRTFAPV
Mflv_3195|M.gilvum_PYR-GCK GKNGKVGPPVHDDLVERDFTAEGPNQLWLSDITEHRTGEGKLYLCAIKDV
Mvan_5959|M.vanbaalenii_PYR-1 GKSGKVGPPVHDDLVQRDFTADAPNQLWLSDITEHRTDEGKLYLCAIKDV
MAB_2088|M.abscessus_ATCC_1997 GKNGKPGPPVHDDLVQRDFTAETPNMLWLSDITEHYTGDGKLYLCAIKDA
MUL_2306|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 GLNRRSGPPVHDDLVQRQFSTHAPNQVWLADITEHRTDEGKLYLCALKDV
MMAR_3786|M.marinum_M RKPNLIGVHTPVDLINRRFTATKPNELWCTDITEHPARDGKVYCCAILDC
Mb2838c|M.bovis_AF2122/97 TTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDA
Rv3475|M.tuberculosis_H37Rv TTIADPATARPADLVQRRFGPPAPNRLWVADLTYVSTWAGFAYVAFVTDA
MAV_3271|M.avium_104 TTKADPAAARHPDLVHRNFAAAAPNQLWVTDLTFVPTWAGVAYVCFIIDA
TH_3162|M.thermoresistible__bu TTIVDLDTPVPKDLVNRRFDVGELDRVWTSDITYLRTGEGWLYLCAVRDG
Mflv_3195|M.gilvum_PYR-GCK FSNRIVGYSIDSRMKSQLAIRALHSAVARRG-----DVAGCILHSDRGSQ
Mvan_5959|M.vanbaalenii_PYR-1 FSNRIVGYSIDSRMKSRLATRALHSAVARRG-----DVAGCIVHTDRGSQ
MAB_2088|M.abscessus_ATCC_1997 FSNRIVGYSIDSRMKSRLATAALRNAVGRRG-----VVAGCVVHTDRGSQ
MUL_2306|M.ulcerans_Agy99 ----MVG-------------------------------------------
MSMEG_1249|M.smegmatis_MC2_155 YSNRIVGYSIDSRMKSSLAVAALEHAVALRS-----PVAT-IVHSDRGSQ
MMAR_3786|M.marinum_M FSRMIVARTFSTTADTALVNNAVNMAVDHRN-----RSGPTILHADHGTQ
Mb2838c|M.bovis_AF2122/97 YARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQ
Rv3475|M.tuberculosis_H37Rv YARRILGWRVASTMATSMVLDAIEQAIWTRQQEGVLDLKDVIHHTDRGSQ
MAV_3271|M.avium_104 HSRMIVGWRVASHMRTSMVLDALEMARWSRG----TTLQDLICHSDAGSQ
TH_3162|M.thermoresistible__bu CSRRVIGWAIDDHMHTDLVESAVAMAVAMRG----QLAEQVVLHADRGCQ
::.
Mflv_3195|M.gilvum_PYR-GCK FRSRKFVHALNHHEMVGSMGRVGAAGDNAAMESFFSLLQKNVLD----RR
Mvan_5959|M.vanbaalenii_PYR-1 FRSRRFVHALGHYEMVGSMGRVGAAGDNAAMESFFSLLQKNVLD----RR
MAB_2088|M.abscessus_ATCC_1997 FRSRKFVQALHHHGMVGSMGRVGAAGDNAAMESFFSLLQKNVLD----RR
MUL_2306|M.ulcerans_Agy99 --------------TVGAMGRVQAAGDNAAMASFFSLLRKNVLG----RR
MSMEG_1249|M.smegmatis_MC2_155 FRSRKFVHALSHNGLHGSMGRVGACGDNAAMESFFALLQRNVLD----RR
MMAR_3786|M.marinum_M FTSWSFGENMRRWGLLGSFGTVGDCFDNAAMESFWARLQVELLN----TR
Mb2838c|M.bovis_AF2122/97 YTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK-PGK--
Rv3475|M.tuberculosis_H37Rv YTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKTELIK-PGK--
MAV_3271|M.avium_104 FTSIRYGERLAEIGAVPSIGTVGDSFDNALAETVNGYYKAELIYGPARSR
TH_3162|M.thermoresistible__bu FTSAQLARFSRGHNLARSVGRTGVCWDNAQHESFWGTMKVEFYD----RH
:.* . . *** :. . : :.
Mflv_3195|M.gilvum_PYR-GCK RWDTREQLRIAIVTWIERTYHRRRRQSGLGRLTPIEFEAIMTTPASQAA-
Mvan_5959|M.vanbaalenii_PYR-1 RWATREELRIAIVTWIERTYHRRRRQSGLGRLTPIEFEAIMTTPASQAA-
MAB_2088|M.abscessus_ATCC_1997 RWATREELRIAIVTWIERTYHRRRRQGALGRLTPVEYEAIMTTTASQAA-
MUL_2306|M.ulcerans_Agy99 RWETREHLRIAIATWTETHLRPPPSASRSWPVAPVRFEAIMISRAIQAA-
MSMEG_1249|M.smegmatis_MC2_155 RWTTRAELRLAIVTWIERTYHRRRRQRALGRLTPIEFELLHTPVATAA--
MMAR_3786|M.marinum_M KWATTIELAAAMADYIDNFYNIERRHSYLGNISPTEFETLWTSTYSIPQL
Mb2838c|M.bovis_AF2122/97 PWRSIEDVELATARWVDWFNH-RRLYQYCGDVPPVELEAAYYAQR--QRP
Rv3475|M.tuberculosis_H37Rv PWRSIEDVELATARWVDWFNH-RRLYQYCGDVPPVELEAAYYAQR--QRP
MAV_3271|M.avium_104 PWKTVEDVELATLSWVHWHNT-SRLHSYLGDIPPTEFEAAFYDAYRTDQP
TH_3162|M.thermoresistible__bu LWPTKAAAKLAVGDWIERVYN-RRRRPSATPAAAATQRSA----------
* : * : . .. .
Mflv_3195|M.gilvum_PYR-GCK -----
Mvan_5959|M.vanbaalenii_PYR-1 -----
MAB_2088|M.abscessus_ATCC_1997 -----
MUL_2306|M.ulcerans_Agy99 -----
MSMEG_1249|M.smegmatis_MC2_155 -----
MMAR_3786|M.marinum_M A----
Mb2838c|M.bovis_AF2122/97 AAG--
Rv3475|M.tuberculosis_H37Rv AAG--
MAV_3271|M.avium_104 LIGIQ
TH_3162|M.thermoresistible__bu -----