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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3317 | - | - | 100% (309) | Integrase, catalytic region |
| M. thermoresistible (build 8) | TH_3162 | - | 2e-24 | 32.44% (225) | PUTATIVE Integrase, catalytic region |
| M. thermoresistible (build 8) | TH_4372 | - | 2e-24 | 26.37% (292) | PUTATIVE Integrase, catalytic region |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2838c | - | 2e-75 | 54.51% (255) | transposase |
| M. gilvum PYR-GCK | Mflv_0665 | - | 8e-56 | 43.36% (286) | integrase catalytic subunit |
| M. tuberculosis H37Rv | Rv3475 | - | 2e-76 | 50.67% (298) | transposase IS6110 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2086c | - | 2e-27 | 53.98% (113) | putative transposase-like protein IS1601-D |
| M. marinum M | MMAR_2548 | - | 1e-52 | 43.75% (256) | transposase, ISMyma03_aa2 |
| M. avium 104 | MAV_5093 | - | 1e-76 | 50.66% (302) | transposase |
| M. smegmatis MC2 155 | MSMEG_2818 | - | 2e-56 | 43.24% (296) | ISMsm1, transposase orfB |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5973 | - | 6e-52 | 52.22% (203) | integrase catalytic subunit |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2818|M.smegmatis_MC2_155 ------------------------------------------MIVDYIDA
Mvan_5973|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 --------------------------------------------MAFIDA
TH_3317|M.thermoresistible__bu -------------------------------------------MIAFIDA
Mb2838c|M.bovis_AF2122/97 --------------------------------------------------
Rv3475|M.tuberculosis_H37Rv AEALAAGQRRIAKGERDFKDRVGFLRGRARPASTLITRFIADHQGHREGP
Mflv_0665|M.gilvum_PYR-GCK -------------------------------------------MAGPDGG
MMAR_2548|M.marinum_M --------------------------------------------------
MSMEG_2818|M.smegmatis_MC2_155 YRHRFGVDPICAVLSEHDMPIAPST-YYAAKARGPVSDAAWAEAHAANAV
Mvan_5973|M.vanbaalenii_PYR-1 --------------------MAPST-YYDVKSRCP-SARARRDAELGPAL
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 NRDEFGVEPICTVLRSAGLQVAPST-YYANKTRTP-SARAQRDAVMRPVI
TH_3317|M.thermoresistible__bu HRDQFGVELICRVLRAAIAGFLTSRGYRAAKARPP-SERAMRDELLIAEL
Mb2838c|M.bovis_AF2122/97 ------------------MPIAPST-YYDHINREP-SRRELRDGELKEHI
Rv3475|M.tuberculosis_H37Rv DGLRWGVESICTQLTELGVPIAPST-YYDHINREP-SRRELRDGELKEHI
Mflv_0665|M.gilvum_PYR-GCK AGLRWGVEPMCAVLSEHGIAISPST-YYEWIAKTP-TRREIRDAELVEII
MMAR_2548|M.marinum_M ------------MLTEHGIKISPST-YYEWMKRTP-SKQQLRDEAVTASI
MSMEG_2818|M.smegmatis_MC2_155 HTVFWAN-----RGLYGVRKMWHAMRHAGHDMGRDQVARLMRICGISGAV
Mvan_5973|M.vanbaalenii_PYR-1 RVIWEDN-----YRVYGAVKLWKAARRGGHDVGRDQVARLMRSLGIEGVR
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 TQLWEDN-----YRVYGARKLWKAARRAGHDIGRDQIARLMREAGIAGVR
TH_3317|M.thermoresistible__bu RTVHEQN-----FSVYGVKKMHHAMKRRGWRVGREQTRRLMRKAGLRGVQ
Mb2838c|M.bovis_AF2122/97 SRVHAAN-----YGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTT
Rv3475|M.tuberculosis_H37Rv SRVHAAN-----YGVYGARKVWLTLNREGIEVARCTVERLMTKLGLSGTT
Mflv_0665|M.gilvum_PYR-GCK TAAREGKRKGRFVQTLGSRKLWIWLRGQGHDVARCTVERIMRENGWEGAR
MMAR_2548|M.marinum_M KEFRE---RNPLNKTLGSRKVWIKLRGDGMDVARCTVERLMQANRWQGAR
MSMEG_2818|M.smegmatis_MC2_155 RGKRRTITTASEQGAPRHPDLIERKWGLPVRPDQWWVADFTYTWTLAGFV
Mvan_5973|M.vanbaalenii_PYR-1 RGKR-VTTTRADPAAPRHPDLVKRQF-TATAPNQLWVTDLTFVPTWVGVA
MAB_2086c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_5093|M.avium_104 RGKR-VRTTKPGPGAPRHPDLVGRDF-TASAPNQLWVTDLTFVPTWAGVA
TH_3317|M.thermoresistible__bu RGKP-VFTTISDPAHCRPADLVNRQF-SAEAPDRLWVADITFVRTWQGFC
Mb2838c|M.bovis_AF2122/97 RGKA-RRTTIADPATARPADLVQRRF-GPPAPNRLWVADLTYVSTWAGFA
Rv3475|M.tuberculosis_H37Rv RGKA-RRTTIADPATARPADLVQRRF-GPPAPNRLWVADLTYVSTWAGFA
Mflv_0665|M.gilvum_PYR-GCK YGSK-HKTTVADSSHVRYPDLVDRRF-YASAPNRLWVADFTYVATWMGFV
MMAR_2548|M.marinum_M YGGA-PKTTIQDEKAQRATDLVDRVF-AAPAPNRLWVADFTYCPTWAGMV
MSMEG_2818|M.smegmatis_MC2_155 YTAFCVDVFSRRILGWRVMSTKATP-LVTSVLEQAVFTRRRTDFRFTTTG
Mvan_5973|M.vanbaalenii_PYR-1 YVCFIVDAFSRLIVGWRAASNMRTT-MVLDALEMARWSRGN-----TLSG
MAB_2086c|M.abscessus_ATCC_199 -----------------------------------------------MPG
MAV_5093|M.avium_104 YVCFLTDAFSRMIIGWRVASHMRTT-VVLDTIEMARWSR-----GKMLAG
TH_3317|M.thermoresistible__bu YTAFVTDACTKAIKGWAVAASMRTEDLPLEAFNHAVWHS-----DSDLSE
Mb2838c|M.bovis_AF2122/97 YVAFVTDAYARRILGWRVASTMATS-MVLDAIEQAIWTRQQEG-VLDLKD
Rv3475|M.tuberculosis_H37Rv YVAFVTDAYARRILGWRVASTMATS-MVLDAIEQAIWTRQQEG-VLDLKD
Mflv_0665|M.gilvum_PYR-GCK YVAFVIDAYSRRIVGWRAARSMTTD-LVLDAIEHAFFTRTQDG--TSLRG
MMAR_2548|M.marinum_M YVAFVIDAFARRVIGWRAATSMKTA-LVIDALEHAFFTRAQEG-FTDLSG
MSMEG_2818|M.smegmatis_MC2_155 LVHHSDAGSQYTSLAFTDALRDSGIAGSIGSVGDALDNALMESAIGLYKT
Mvan_5973|M.vanbaalenii_PYR-1 LRCHSDAGSQFTSIRYGERLAELGAVPSIGSVGDSFDNALAERAC-----
MAB_2086c|M.abscessus_ATCC_199 LTCHSDAGSQFTSIRYGERLAEIGAVPSIGTIGDSYDNAL-ETVNGYYKA
MAV_5093|M.avium_104 LRCHSDAGSQFTSIRYSERLAEIGAVPSIGTVGDSFDNALAETVNGYYKA
TH_3317|M.thermoresistible__bu LIHHSDRGSQYLSLTYTDRLAELGIAPSVGSRGDSYDNALAEAVNAAYKT
Mb2838c|M.bovis_AF2122/97 VIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKT
Rv3475|M.tuberculosis_H37Rv VIHHTDRGSQYTSIRFSERLAEAGIQPSVGAVGSSYDNALAETINGLYKT
Mflv_0665|M.gilvum_PYR-GCK LIAHSDAGSQYTSVAFTQRLIDEGVDPSVGSVGDALDNALAETTVGSFKN
MMAR_2548|M.marinum_M LVAHSDAGSQYTSIAFTTRLIDAGIDASVGSVADAYDNALAETTVGSFKN
: *:* ***: *: : * : * *:*: ..: **** *
MSMEG_2818|M.smegmatis_MC2_155 ELID---RHQSWTGRAEVERETAAWVHWYNTDRLHSSLSYQSPIDYEAQY
Mvan_5973|M.vanbaalenii_PYR-1 -LID---CVSGWA-------------------------------------
MAB_2086c|M.abscessus_ATCC_199 ELIYGPVRTRPWKTVEDVELATLSWVYWHNTSRLHSYLNDIPPTEFEAAF
MAV_5093|M.avium_104 ELIYGPARPGPWKTVEDVELATLSWVHWHNTSRLHGYLNDVPPAEFEAAF
TH_3317|M.thermoresistible__bu ELIN---RGKPWRSVDDVELATAGWVAWYNQERLHEALGYVPPAEYEAAL
Mb2838c|M.bovis_AF2122/97 ELIK---PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAY
Rv3475|M.tuberculosis_H37Rv ELIK---PGKPWRSIEDVELATARWVDWFNHRRLYQYCGDVPPVELEAAY
Mflv_0665|M.gilvum_PYR-GCK EVIR---RQGPWRDVNQVELATAEWVVWFNTERPHEYLDDFTPEAVEKLH
MMAR_2548|M.marinum_M ELIR---RQGPWRDVDHVEIGTLNWVDWFNNERPHEYLADLTPTQAEALH
:* *
MSMEG_2818|M.smegmatis_MC2_155 R--NDAASTPEVA----
Mvan_5973|M.vanbaalenii_PYR-1 -----------------
MAB_2086c|M.abscessus_ATCC_199 Y-DAHGTDQPLAGIQ--
MAV_5093|M.avium_104 Y-ATKRTDHPLVEIQ--
TH_3317|M.thermoresistible__bu TGTSHPASQPTPALATN
Mb2838c|M.bovis_AF2122/97 Y--AQRQRPAAG-----
Rv3475|M.tuberculosis_H37Rv Y--AQRQRPAAG-----
Mflv_0665|M.gilvum_PYR-GCK Y--DQKLTPPKAG----
MMAR_2548|M.marinum_M Y--RHKSSLAAAG----