For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_4015 | - | - | 100% (237) | - |
M. thermoresistible (build 8) | TH_0641 | - | 2e-15 | 27.59% (203) | transcriptional regulator, TetR family protein |
M. thermoresistible (build 8) | TH_2855 | - | 1e-11 | 28.63% (234) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1561 | - | 7e-12 | 30.86% (162) | transcriptional regulator |
M. gilvum PYR-GCK | Mflv_4467 | - | 3e-15 | 29.29% (198) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv1534 | - | 7e-12 | 30.86% (162) | transcriptional regulator |
M. leprae Br4923 | MLBr_01070 | - | 7e-09 | 25.60% (168) | putative TetR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_0314c | - | 1e-14 | 30.85% (188) | TetR family transcriptional regulator |
M. marinum M | MMAR_0533 | - | 4e-14 | 31.93% (166) | transcriptional regulatory protein |
M. avium 104 | MAV_4886 | - | 1e-14 | 32.24% (183) | transcriptional regulator, TetR family protein |
M. smegmatis MC2 155 | MSMEG_0606 | - | 4e-15 | 34.62% (182) | transcriptional regulator, TetR family protein |
M. ulcerans Agy99 | MUL_1197 | - | 3e-14 | 31.93% (166) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_0406 | - | 2e-15 | 32.09% (187) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0533|M.marinum_M ---------------------------MPEFPTHRGRQTQAAIDTAARTV MUL_1197|M.ulcerans_Agy99 ---------------------------MPEFPTHRGRQTQAAIDTAARTV MAV_4886|M.avium_104 --------------MSTAASPADRPGRPAALPTHRGRRTRAAIDMAARTV MSMEG_0606|M.smegmatis_MC2_155 --------------MTVSP--------RDQLPTARGRQTQAAIDAAARAV Mvan_0406|M.vanbaalenii_PYR-1 --------------MSISP--------REELPTVRGRQTQAAIDMAARSV MAB_0314c|M.abscessus_ATCC_199 -------------------------------------------MDAARVV Mb1561|M.bovis_AF2122/97 --------------MSRASAR-----RRRAVSDEDKSQRRDEILAAAKIV Rv1534|M.tuberculosis_H37Rv --------------MSRASAR-----RRRAVSDEDKSQRRDEILAAAKIV Mflv_4467|M.gilvum_PYR-GCK -----------------------MPPGSSDALSAKGRQTRDALAQAARKL TH_4015|M.thermoresistible__bu VVPRRRVDNGSNEQGVASDATGGDRMNRPLPPTARGRRSRRALLDAAKEV MLBr_01070|M.leprae_Br4923 ----------MIVVGNFTQSNYVPASRGRRSSQLSGDDREQAILAVAERL .*. : MMAR_0533|M.marinum_M IARKGILATTIADIAAEAGRSAASFYNYYDSKEAMVRQWALRFRDEVNQR MUL_1197|M.ulcerans_Agy99 IARKGILATTIADIAAEAGRSAASFYNYYDSKEAMVRQWALRFRDEVNQR MAV_4886|M.avium_104 IARKGVLATTIADIAAEAGRSAASFYNYYDSKEAMVRQWALRFRDEANQR MSMEG_0606|M.smegmatis_MC2_155 ISRKGILATTIADIAAEANRSTASFYNYYDSKEAMVHEWALRFRDEARDR Mvan_0406|M.vanbaalenii_PYR-1 IARKGILATTVADIAGEAGRSTASFYNYYDSKEAMVREWAVRFRDEARTR MAB_0314c|M.abscessus_ATCC_199 ISRVGYAETRVIDITTEAGKSVGVFYNYFTDKAELLRTMVDEFRDDAYAR Mb1561|M.bovis_AF2122/97 FAHKGFHATTVADIAKQAGLAYGLIYWYFDSKDDLFHALMAGEEEALRAH Rv1534|M.tuberculosis_H37Rv FAHKGFHATTVADIAKQAGLAYGLIYWYFDSKDDLFHALMAGEEEALRAH Mflv_4467|M.gilvum_PYR-GCK FAERGFHGTTLSDITSAAGKSPAAFYRYFSDKEDLLAALAESFLHEVVAP TH_4015|M.thermoresistible__bu FARDGFADARITDIADAAGTAHGSFYRYFDSKEEIFIELLRELVEELRQP MLBr_01070|M.leprae_Br4923 LAERPLGDFSVDELAKGAGISRPTFYFYFPSKNAVLLSLLDDLNMKSRSA ::. : ::: *. : :* *: .* :. MMAR_0533|M.marinum_M ALSVTS-----HGLSNRERAYEAAAAHWNTYRNRLAEMVSVSQLAMVN-E MUL_1197|M.ulcerans_Agy99 ALSVTS-----HGLSNRERSYEAAAAHWNTYRNRLAEMVSVSQLAMVN-E MAV_4886|M.avium_104 ARSATR-----HGLSDRDRAYTAAAAHWHTYRNRLAEVISVSQLAMVN-D MSMEG_0606|M.smegmatis_MC2_155 AQAARE-----PGLTNWERSYQAVSAHWATYRHRLAEIISVSQLAMVS-D Mvan_0406|M.vanbaalenii_PYR-1 SLSAAR-----PGLSNWERSYQAAAAHWNTYRNRLAEIIAVSQMAMIS-D MAB_0314c|M.abscessus_ATCC_199 GDTVAT-----SDRPPHEVIRDIVTVYWTTYREHAPVLSGVFQAAQVD-P Mb1561|M.bovis_AF2122/97 VAAELARVGGSTEAPLRALLQAAVQATFEFFETDKATVKLLFRDAYALGG Rv1534|M.tuberculosis_H37Rv VAAELARVGGSTEAPLRALLQAAVQATFEFFETDKATVKLLFRDAYALGG Mflv_4467|M.gilvum_PYR-GCK SGLSVPLP---ESPDDDAFFTAVVTGYWTMFKQNIGIMIAVAQLAATQ-P TH_4015|M.thermoresistible__bu VRTDAG----TEPKNPYERILRANRTYLEAYRANRAIMIVWEQVASLN-E MLBr_01070|M.leprae_Br4923 VEALAEQ----LPADPAAVWRSAITAFFEVCGTHRAVAVAGAAAKATS-P MMAR_0533|M.marinum_M DFAQQWADMCAIPISFIKETVKRAQAEGYCP-GDDPQLVAEAIVAMFNQF MUL_1197|M.ulcerans_Agy99 DFAQQCADMCAIPISFIKETVKRAQAEGYCP-GDDPQLVAEAIVAMFNQF MAV_4886|M.avium_104 DFARYWAEICAIPISFIAESVRRAQARGYCR-DDDPQLIAEAIVAMFNQF MSMEG_0606|M.smegmatis_MC2_155 DFAQYWAEICELPISLITDMIKHAQRQGFCP-DDDPHLTAVALVSMLNQF Mvan_0406|M.vanbaalenii_PYR-1 DFAEYWNEICSLPIALITSLVKQAQREGFCP-EDDARLVAVALVSMLNQF MAB_0314c|M.abscessus_ATCC_199 TFVDYWRNLRAPARTMIANNIRHLQARGYCP-GMDPDITASAIGAMLDYF Mb1561|M.bovis_AF2122/97 RFEEHLGGIYERFIDDIEAVVVAAQRRGEVV-EAPSRMAAYTLAALVGQL Rv1534|M.tuberculosis_H37Rv RFEEHLGGIYERFIDDIEAVVVAAQRRGEVV-EAPSRMAAYTLAALVGQL Mflv_4467|M.gilvum_PYR-GCK RFTLVQNEFRRFGMDIVAASVRRAQEQGYGT-ELNPEHTAAAIALLFENF TH_4015|M.thermoresistible__bu HVEQLRREYSDRFAARIERAIIRWQEAGLADPAIDPRYAAAALSGMLSNF MLBr_01070|M.leprae_Br4923 EVRRLWSTVMQQWIDYNTAAIQAERKCGVAP----DTIPAEDLAVALQLM . : : * * : . : MMAR_0533|M.marinum_M CYIQLSGSRTK---EPDDLACIQTLANIYYRAIYGVEVS------ MUL_1197|M.ulcerans_Agy99 CYVQLSGSRTK---EPDDLACIQTLANIYYRAIYGVEVS------ MAV_4886|M.avium_104 CYIQLGSARSG---EPDDQACIRTLANIYYRAIYGREEEPQS--- MSMEG_0606|M.smegmatis_MC2_155 CYTKLSGGNAD---DVDDTACITTLANVFYRTIYHRGVPQP---- Mvan_0406|M.vanbaalenii_PYR-1 CYTQLSGVNADASADIDDEACIKTLADIFYRTIYYPENGQP---- MAB_0314c|M.abscessus_ATCC_199 CYVWLVEGGERGRSAVTDEEAIDTLARIWFNALWWKSEGAHGAT- Mb1561|M.bovis_AF2122/97 AHRRLNTDDNVTAAQVADFVVSLVLDGLRPRALAVGARGGRAART Rv1534|M.tuberculosis_H37Rv AHRRLNTDDNVTAAQVADFVVSLVLDGLRPRALAVGARGGRAART Mflv_4467|M.gilvum_PYR-GCK TTVFVGASGLG--VQMTDQDAIATLSRIWKKTLYGY--------- TH_4015|M.thermoresistible__bu AYRWSVQDADYDLDTAAEQLSLLWANALGVRVPAHHEPAHA---- MLBr_01070|M.leprae_Br4923 TERVMAATFSDEKPLIPDKKVIDTLVHIWLASIYGS--------- : :