For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3291 | - | - | 100% (202) | transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_2839 | - | 1e-63 | 58.33% (192) | PUTATIVE transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_2855 | - | 1e-10 | 28.41% (176) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2534 | - | 1e-11 | 32.37% (139) | TetR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2551 | - | 3e-14 | 29.12% (182) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2506 | - | 1e-11 | 32.37% (139) | TetR family transcriptional regulator |
| M. leprae Br4923 | MLBr_02677 | - | 1e-05 | 24.34% (152) | putative TetR-family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_0901c | - | 2e-14 | 27.81% (187) | TetR family transcriptional regulator |
| M. marinum M | MMAR_3853 | - | 6e-12 | 27.27% (143) | putative regulatory protein |
| M. avium 104 | MAV_5066 | - | 2e-71 | 69.89% (176) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_4718 | - | 7e-14 | 27.17% (184) | transcriptional regulator, TetR family protein |
| M. ulcerans Agy99 | MUL_3785 | - | 4e-12 | 27.27% (143) | putative regulatory protein |
| M. vanbaalenii PYR-1 | Mvan_4092 | - | 1e-11 | 29.94% (157) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3291|M.thermoresistible__bu --------------VNDEQESKSAATRARILDAAAHVLSVRGYAGLRLTD
MAV_5066|M.avium_104 ------------------------------------MLSERGYAGLRLTD
Mflv_2551|M.gilvum_PYR-GCK MAPTEI---------SSPRSRAKSDRRDQLVAAAERLFAEHGYLAVRLED
Mvan_4092|M.vanbaalenii_PYR-1 MTTTDA---------TSPRSRAKSDRRGQLIGAAERLIAEHGYLAVRLED
MSMEG_4718|M.smegmatis_MC2_155 MSS------------VTRRSQAKSDRRSQLIAAAERLVAERGYLAVRLED
Mb2534|M.bovis_AF2122/97 MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLED
Rv2506|M.tuberculosis_H37Rv MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLED
MMAR_3853|M.marinum_M MAASAPDEQTATP---NRRSQQKSDRRLQLLSAAERLFAERGFLAVRLED
MUL_3785|M.ulcerans_Agy99 MAASAPDEQTATP---NRRSQQKSDRRLQLLSAAERLFAERGFLAVRLED
MAB_0901c|M.abscessus_ATCC_199 MTTPRTR--------PSRQVGRPGYDLDSLLAVAVSVFNQRGYDGTSMEH
MLBr_02677|M.leprae_Br4923 MESQRR-----------TQEERSTATRDALTLARHRLWRLRGYAEVGTPE
: :*: .
TH_3291|M.thermoresistible__bu VAARADIQAPAIYYYYPSREALIEEVMWVGIADTRDQVVAALDALPDGTP
MAV_5066|M.avium_104 VAAAAELQAPAIYYYFSSRDELIEEVMWSGLADMREHVAAVLEDVPDGTP
Mflv_2551|M.gilvum_PYR-GCK IGSAAGISGPAVYRHFPNKEALLVELLVG--ISTRLLAGATDVVG-ADDD
Mvan_4092|M.vanbaalenii_PYR-1 IGAAAGISGPAIYRHFPNKEALLVELLVG--ISTRLLAGAVEVVDRAGDD
MSMEG_4718|M.smegmatis_MC2_155 IGAAVGVSGPAIYRHFPNKEAMLVELLVG--ISTRLLDGAREVVE-THDD
Mb2534|M.bovis_AF2122/97 IGAAAGVSGPAIYRHFPNKESLLVELLVG--VSARLLAGARDVTT-RSAN
Rv2506|M.tuberculosis_H37Rv IGAAAGVSGPAIYRHFPNKESLLVELLVG--VSARLLAGARDVTT-RSAN
MMAR_3853|M.marinum_M IGAAAGISGPAIYRHFPNKESLLVELLVG--ISSRLLAGARQVTT-NSND
MUL_3785|M.ulcerans_Agy99 IGAAAGISGPAIYRHFPNKESLLVELLVG--ISSRLLAGARQVTT-NSND
MAB_0901c|M.abscessus_ATCC_199 LSTRLGISKSSIYHHVSGKEELLRLAVDR---ALDALFAATEAPDTTTGP
MLBr_02677|M.leprae_Br4923 IAKEADTTRGAVYHQFTDKAALFRDVVETVEQDAMAQIASVVASS-GAKT
:. ::* ..: :: : :
TH_3291|M.thermoresistible__bu ALDRLLTAVATHLQHALEISDYATAAIRNAGQVPLAIRKRQIREEERYGE
MAV_5066|M.avium_104 AMDRLLIAAEAHLRHELEVSDYTTASIRNAGQIPPPIRKRQLLEEARYGE
Mflv_2551|M.gilvum_PYR-GCK AASTLENLIDFHLDFALDESDLIRIQDRDLGNLPPAAKRQVRRKQRQYVE
Mvan_4092|M.vanbaalenii_PYR-1 ADSALEGLIDFHLDFVFGEPDLIRIQDRDLGNLPPAAKRQVRRKQRQYVE
MSMEG_4718|M.smegmatis_MC2_155 PAKALDALVDFHLDFAFDESDLIRIQDRDLAHLPDTAKRQVRRAQRQYVE
Mb2534|M.bovis_AF2122/97 LAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVE
Rv2506|M.tuberculosis_H37Rv LAAALDGLIEFHLDFALGEADLIRIQDRDLAHLPAVAERQVRKAQRQYVE
MMAR_3853|M.marinum_M AAAALDGLIDFHLDFALGEPDLIRIQDRDLGHLPAAAERQVRKAQRQYVE
MUL_3785|M.ulcerans_Agy99 AAAALDGLIDFHLDFALGEPDLIRIQDRDLGHLPAAAERQVRKAQRQYVE
MAB_0901c|M.abscessus_ATCC_199 AIDRLENLVKRSIQVLVQELPYVTLLLRIRGNT--AAERRALARRREFDD
MLBr_02677|M.leprae_Br4923 PVDAIRAKVDAWLEG-LADPQVRQLILLYAPSVLGWAAFRDVAQHYSLGM
: : . : .
TH_3291|M.thermoresistible__bu VWRRLINDLAREGQLRPELDLYIAQMLILGALNWAAEWWDPRRSSVETVI
MAV_5066|M.avium_104 LWRKLINDVACEGLLWPQLDLHIAQMLVLGALNWAVEWWNPRRGSIESVV
Mflv_2551|M.gilvum_PYR-GCK IWVDVLRRCTPG---LSEADARLMAHGTFGLLNSTAHSMKPGTTKT--AE
Mvan_4092|M.vanbaalenii_PYR-1 IWVDVLRRRTPG---LTETDARLMAHAAFGLLNSTPHGVKPGLNKA--AE
MSMEG_4718|M.smegmatis_MC2_155 IWVSVLTRLRRD---LPEEEARVMAHATFGLLNSTPHSVKPAVTKAQSST
Mb2534|M.bovis_AF2122/97 VWVGVLRELNPG---LAEADARLMAHAVFGLLNSTPHSMKAADSKP-ART
Rv2506|M.tuberculosis_H37Rv VWVGVLRELNPG---LAEADARLMAHAVFGLLNSTPHSMKAADSKP-ART
MMAR_3853|M.marinum_M IWVGVLRQLDPG---LAEADARLMAHAAFGLLNSTPHSMKSADTKS-ACA
MUL_3785|M.ulcerans_Agy99 IWVGVLRQLDPG---LAEADARLMAHAAFGLLNSTPHSMESADTKS-ACA
MAB_0901c|M.abscessus_ATCC_199 IVGNLVEEACNEGSIRAGVDPALTSRLIFGTVNSLIEWYRPSRTLSADEV
MLBr_02677|M.leprae_Br4923 TEQQLLSEASRARQLAQPLDHVLIGKLYESAMAIRRHHRLPEASPARNQT
:: : : . : . .
TH_3291|M.thermoresistible__bu ANA---------------QTIIKHGITTVE-------------------
MAV_5066|M.avium_104 RNA---------------QLIIRHGLTDGATA-----------------
Mflv_2551|M.gilvum_PYR-GCK AGS---------------RTVLREMTVAALTSAERRRG-----------
Mvan_4092|M.vanbaalenii_PYR-1 ASS---------------RTVLRTMTVAALTSAGRRA------------
MSMEG_4718|M.smegmatis_MC2_155 AQS---------------RGVLRRMTVAALTATG---------------
Mb2534|M.bovis_AF2122/97 VRA---------------RAVLRAMTVAALSAADRCL------------
Rv2506|M.tuberculosis_H37Rv VRA---------------RAVLRAMTVAALSAADRCL------------
MMAR_3853|M.marinum_M PHS---------------RAVMRAMTVAALTVDVGA-------------
MUL_3785|M.ulcerans_Agy99 PHS---------------RAVMRAMTVAALTVDVGA-------------
MAB_0901c|M.abscessus_ATCC_199 ADA---------------VATMIFDGLRTRSGQH---------------
MLBr_02677|M.leprae_Br4923 GAAPTHREHVARPSCEALTRHIRHRSTRTRSHRGKRGELLPRAATSSLL
: :