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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3275 | - | - | 100% (554) | putative oxidoreductase, GMC family protein |
| M. thermoresistible (build 8) | TH_4204 | - | 4e-83 | 34.86% (545) | PUTATIVE glucose-methanol-choline oxidoreductase |
| M. thermoresistible (build 8) | TH_4588 | - | 7e-25 | 32.64% (288) | PUTATIVE glucose-methanol-choline oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1310 | - | 7e-81 | 37.00% (546) | dehydrogenase FAD flavoprotein GMC oxidoreductase |
| M. gilvum PYR-GCK | Mflv_1255 | - | 3e-76 | 33.76% (542) | glucose-methanol-choline oxidoreductase |
| M. tuberculosis H37Rv | Rv1279 | - | 7e-81 | 37.00% (546) | dehydrogenase FAD flavoprotein GMC oxidoreductase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0250 | - | 2e-75 | 35.05% (545) | GMC-type oxidoreductase |
| M. marinum M | MMAR_4141 | - | 4e-81 | 36.75% (547) | dehydrogenase fad flavoprotein GMC oxidoreductase |
| M. avium 104 | MAV_4980 | - | 2e-60 | 33.82% (479) | choline dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_0526 | - | 1e-81 | 35.23% (545) | oxidoreductase, GMC family protein |
| M. ulcerans Agy99 | MUL_4004 | - | 1e-78 | 36.38% (547) | dehydrogenase fad flavoprotein GMC oxidoreductase |
| M. vanbaalenii PYR-1 | Mvan_5894 | - | 2e-78 | 35.04% (548) | glucose-methanol-choline oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1310|M.bovis_AF2122/97 --------MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKN
Rv1279|M.tuberculosis_H37Rv --------MDTQSDYVVVGTGSAGAVVASRLSTDPATTVVALEAGPRDKN
MMAR_4141|M.marinum_M --------MDIECDYVVVGTGSAGAAVVNRLSADSGTSVVALEAGPSDKN
MUL_4004|M.ulcerans_Agy99 --------MDIECDYVVVGTGSAGAAVVNRLSADSGTSVVALEAGPSDKN
MAB_0250|M.abscessus_ATCC_1997 ------MVEDLAADFVIVGAGSAGAPLATRLSERTNDQVLVLEAGPKDKD
TH_3275|M.thermoresistible__bu MGVVMMGRRSNLHDYIVVGAGSSGCTVAGRLAEGKRHSVLVLEAGGSDLS
MAV_4980|M.avium_104 --------------------------------------------------
Mflv_1255|M.gilvum_PYR-GCK -------MAVTGYDYIVVGAGSAGCVLANRLSADPAIRVLLLEAGRGDRN
MSMEG_0526|M.smegmatis_MC2_155 ---------MTSYDYIIAGAGSAGCVLANRLSEDPRIKVLLLEAGGSDRN
Mvan_5894|M.vanbaalenii_PYR-1 ---------MTDFDYIIVGAGSAGCVLAHRLSEDPRVNVLLIEAGGRDRS
Mb1310|M.bovis_AF2122/97 RFIGVPAAFSKLFRSEIDWDYLTEPQPELDGREIYWPRGKVLGGSSSMNA
Rv1279|M.tuberculosis_H37Rv RFIGVPAAFSKLFRSEIDWDYLTEPQPELDGREIYWPRGKVLGGSSSMNA
MMAR_4141|M.marinum_M RFIGIPAAFPKLFRSEVDWDYTTEPEPQLGGREIYWPRGKVLGGSSSMNA
MUL_4004|M.ulcerans_Agy99 RFIGIPAAFPKLFRSEVDWDYTTEPEPQLGGREIYWPRDKVLGGSSSMNA
MAB_0250|M.abscessus_ATCC_1997 MGIHIPAAFSKLFRSDVDWDYLTEPQPQLNNRQIYWPRGKTLGGSSSMNA
TH_3275|M.thermoresistible__bu PFIRIPAGLMRVNPRNY-WHFRLEPDPTRNGAVDTWAAGRVVGGGSSVNA
MAV_4980|M.avium_104 ----MQTAIGRAVP---------------------FARGRGIGGSSTINA
Mflv_1255|M.gilvum_PYR-GCK LWLHIPKGAGKLFDSERHMWHYETTPFGPDAHVEQWMRGKVIGGSSAVNG
MSMEG_0526|M.smegmatis_MC2_155 PLFSIPKGSGKLFDSEKHMWHYSTEPFGPNPHAEQWMRGKVLGGSSSING
Mvan_5894|M.vanbaalenii_PYR-1 PMIRIPKGVGKILGDPKLTWHFPVRPIGPSQIVEQWVRGKTLGGSSSVNG
: . : : .: :**.*::*.
Mb1310|M.bovis_AF2122/97 MMWVRGFASDYDEWAARAGPRWSYADVLGYFRRIENVTAAWHFVSGDDSG
Rv1279|M.tuberculosis_H37Rv MMWVRGFASDYDEWAARAGPRWSYADVLGYFRRIENVTAAWHFVSGDDSG
MMAR_4141|M.marinum_M MMWVRGFAADYDEWARLAGSHWSYGELLGYFRQIEDVTAAWHFVNGDDSG
MUL_4004|M.ulcerans_Agy99 MMWVRGFAADYDEWARLAGSHWSYGELLGYFRQIEDVTAAWHFVNGDDSG
MAB_0250|M.abscessus_ATCC_1997 MMWVRGFAADYDDWAQVAGEQWSFANIAPYFKRIEAVEG----ATESDEG
TH_3275|M.thermoresistible__bu MLWVRGNRADFDTWAKLGAQGWDYESLLPAMRSLETWEG----GADRYRG
MAV_4980|M.avium_104 MVFARGHRDSYSRWRDNGAAGWSFDELLPYFKRSESTCG----KDPSLRG
Mflv_1255|M.gilvum_PYR-GCK MIYNRGHRADYDALEQMGNKGWGWDEILPIFKGFEDHEFG----PSATRG
MSMEG_0526|M.smegmatis_MC2_155 MIYNRGTRADYDGLERLGNKGWGWDDILPIFKRFEDNEFG----PSATRG
Mvan_5894|M.vanbaalenii_PYR-1 MVYNRGSAPDYDALAALGNPAWGWDHILPAFRAIENHELG----PDPTRG
*:: ** .:. . *.: : :: * *
Mb1310|M.bovis_AF2122/97 VTGPLHISRQRSPRSVTAAWLAAARECGFAAARPNSPRPE-GFCETVVTQ
Rv1279|M.tuberculosis_H37Rv VTGPLHISRQRSPRSVTAAWLAAARECGFAAARPNSPRPE-GFCETVVTQ
MMAR_4141|M.marinum_M VTGPLQISRQRSPSPLTAAWLAATRDCGFPPVQPNSAEPE-GFCETIVTQ
MUL_4004|M.ulcerans_Agy99 VTGPLQISRQRSPSPLTAAWLAATRDCGFAPVQPNSAEPE-GFCETIVTQ
MAB_0250|M.abscessus_ATCC_1997 TDGALKISKQRSPRSSTAAWLEAVKEAGFDVERANTPEPK-GFSETMVCQ
TH_3275|M.thermoresistible__bu GTGPQHVSRIRLHHPLVQKWLTGAAQTGMPILADYNGESQFGAAWSQLSQ
MAV_4980|M.avium_104 QDGPMAVAPAAHPNPVLVACLCAAIQQGYPRAADISGGLEVGFGFTDLNI
Mflv_1255|M.gilvum_PYR-GCK TGGPLHISVPRDPDPLCEDMIEAATGAGMWRVRDINESDGERIGYATSTI
MSMEG_0526|M.smegmatis_MC2_155 VGGPLHISIPRDPDPLCEEMLAAAEASGLTRVQDINEHDTERIGYATSTI
Mvan_5894|M.vanbaalenii_PYR-1 TGGPLEISVDAHLPRICHDVIAAGEKLGWSATDDVNGSDAARIGPAPRTI
*. :: : . * . :
Mb1310|M.bovis_AF2122/97 RRGARFSTADAYLKPAMRRKNLRVLTGATATRVVIDGDRAVGVEYQSDGQ
Rv1279|M.tuberculosis_H37Rv RRGARFSTADAYLKPAMRRKNLRVLTGATATRVVIDGDRAVGVEYQSDGQ
MMAR_4141|M.marinum_M RRGSRWSTVDAYLRPAMGRRNLSILTGATATRIVIHGTRATGIEYQREGQ
MUL_4004|M.ulcerans_Agy99 RRGSRWSTVDAYLRPAMGRRNLSILTGATATRIVIHGTRATGVEYQREGQ
MAB_0250|M.abscessus_ATCC_1997 HGGRRWSTADGYLKPGLRRRNLNVVTDAQARRVLFDGIRAVGVEYVRDGI
TH_3275|M.thermoresistible__bu KNGLRHSAAQAFLAPARRRGEVDVESHAVVDKVIIENGRAVGVEYVRRGT
MAV_4980|M.avium_104 VDGKRQSAADAYLLPALDRPNLEFHSGATVHRLRIRGSRCTGVEYTTAEG
Mflv_1255|M.gilvum_PYR-GCK RGGRRVSAATAFLKPVLHRPNLTVRTGATVRRVLFDGERADGVEIATGAG
MSMEG_0526|M.smegmatis_MC2_155 RNGRRVSAATAFLKPALGRPNLTVRTSATVGRILFEGTRAVGVDVTGTSG
Mvan_5894|M.vanbaalenii_PYR-1 RNGQRVSSARAFLHPVAHRPNLTIATDTTVNRILFKADKAIGVQATTSKG
* * *:. .:* * * :: . : : . :: : :. *::
Mb1310|M.bovis_AF2122/97 -TRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVG
Rv1279|M.tuberculosis_H37Rv -TRIVYARREVVLCAGAVNSPQLLMLSGIGDRDHLAEHDIDTVYHAPEVG
MMAR_4141|M.marinum_M -HCTVHARREVVLCGGAVNSPQLLMLSGIGDRSHLADHGIETVYHAPEVG
MUL_4004|M.ulcerans_Agy99 -HCTVHARREVVLCGGAVNSPQLLMLSGIGDRSHLADHGIETVYHAPEVG
MAB_0250|M.abscessus_ATCC_1997 -THTVHARREVILSGGAINSPQLLMLSGIGEATRLGELGIPVVHDAPQVG
TH_3275|M.thermoresistible__bu -RKVAYAAKEVILSAGALCSPLILLRSGIGPAEELRDHGIDVIADLPGVG
MAV_4980|M.avium_104 -RQVTAAAREIILCAGAIGSPHLLLASGIGPPNHLRSFRVDVALELPGVG
Mflv_1255|M.gilvum_PYR-GCK -TEQVRAAREVVLSLGSLNSPKLLQLSGIGPSDVLGAAGVPVLVERDNVG
MSMEG_0526|M.smegmatis_MC2_155 -TTQVRASREVIVSLGSLNSPVLLQLSGIGPREVLRSAGVQVFIEHDRVG
Mvan_5894|M.vanbaalenii_PYR-1 GAAVCTAGREVLLSLGSISTPRLLQLSGIGDRSLLRGLGIDTLADSPNVG
* :*:::. *:: :* :* **** * : . . **
Mb1310|M.bovis_AF2122/97 CNLLDHLVTVLGFDVEKDSLFAAEKPGQLIS------YLLRRRGMLTSNV
Rv1279|M.tuberculosis_H37Rv CNLLDHLVTVLGFDVEKDSLFAAEKPGQLIS------YLLRRRGMLTSNV
MMAR_4141|M.marinum_M QNLLDHLITPLGFDVAGDSLAAAEKPMQLIN------YLLRRRGMLTSNV
MUL_4004|M.ulcerans_Agy99 QNLLDHLITPLGFDVAGDSLAAAEKPMQLIN------YLLRRRGMLTSNV
MAB_0250|M.abscessus_ATCC_1997 QNLLDHLCCPVGYAVKSDSLFGAEKPLQLAN------YFLRHRGMLTSNV
TH_3275|M.thermoresistible__bu RNLQEHPAITMTFTVTDRTLNQELTPLSILKGAF--DFVLRRRGPATAPL
MAV_4980|M.avium_104 ANLQDHPIVPLVYRAARPVPAGRYNHGELLG-------LIRR--HATGGP
Mflv_1255|M.gilvum_PYR-GCK RRMREHRCATLRYRLKEDLGYNKLLATNVGQALTGMKYLATRKGPLAAPS
MSMEG_0526|M.smegmatis_MC2_155 RGLREHRCATLRFDLIEDLGYNKQLASSVAQALTGLRYLATRRGPLGAPS
Mvan_5894|M.vanbaalenii_PYR-1 RRMREHRCFALQFRLDRPVGYNRQLSTPLRQAFTAARYLATRRGPLAGAA
: :* : : : . : .
Mb1310|M.bovis_AF2122/97 GEAYGFVRSRPELKLPDLELIFAPAPFYDEALVP---------PAGHGVV
Rv1279|M.tuberculosis_H37Rv GEAYGFVRSRPELKLPDLELIFAPAPFYDEALVP---------PAGHGVV
MMAR_4141|M.marinum_M GEAYGFVRSRPGLDLPDLELIFAPAPFYDEGLPAH--------PPGHGVV
MUL_4004|M.ulcerans_Agy99 GEAYGFVRSRPGLDLPDLELIFAPAPFYDEGLPAH--------PPGHGVV
MAB_0250|M.abscessus_ATCC_1997 GEAYGFLRSHPNLTLPDLELIFAPAPFFDEGIGV---------ATEHAIV
TH_3275|M.thermoresistible__bu SHAMLFGPPLEPEGWPQYHVLMAPLGTEQEKPHATQEEAEQNRYDKQNVS
MAV_4980|M.avium_104 PEIQIFG--VDSADVPG-------LGG------------------ADGYV
Mflv_1255|M.gilvum_PYR-GCK FDVVGFVKDRPDSERPLGQVMMGPWTLPPYNTGEP----VVIEREPGISC
MSMEG_0526|M.smegmatis_MC2_155 FDIVGFVKTRADVDRPDGQIMMGPYTLPPYNVGEP----VTIQRQAGLSC
Mvan_5894|M.vanbaalenii_PYR-1 FDVIGFFKTSPELERPDAQILMAPFSLAPYEQGKE----ATVERDPGIQA
. * *
Mb1310|M.bovis_AF2122/97 FG--------PILVAPQSRGQITLRSADPHAKPVIEPRYLSDLGGVDRAA
Rv1279|M.tuberculosis_H37Rv FG--------PILVAPQSRGQITLRSADPHAKPVIEPRYLSDLGGVDRAA
MMAR_4141|M.marinum_M FG--------PILVAPQSRGQITLRSADPHAKPIIEARYLSDPGGVDRAA
MUL_4004|M.ulcerans_Agy99 FG--------PILVAPQSRGQITLRSADPHAKPIIEARYLSDPGGVDRAA
MAB_0250|M.abscessus_ATCC_1997 MG--------PILLKPESSGEITLTSPDPLAKPRIDPRYLSDPAGRDRAA
TH_3275|M.thermoresistible__bu LSRNSIVSAFMSPLHPRGRGTVRLGSPDVDATPVIEHPMLAD--ERDVVD
MAV_4980|M.avium_104 LG--------VSVMQPVSRGRVGLSGPTIQEPPAIDPNYLSD--DRDMGL
Mflv_1255|M.gilvum_PYR-GCK LG---------MVLRPTSQGYVEITSADPGAALRITPNYLTT--EHDRTA
MSMEG_0526|M.smegmatis_MC2_155 LG---------MVLRPTSEGALEITSSGPRPSVRIEPNYLGS--EHDRTA
Mvan_5894|M.vanbaalenii_PYR-1 IG---------YLLRPDSEGSVAITSSDPEAPLDIDPGFLIT--THDREK
:. : * . * : : .. * * *
Mb1310|M.bovis_AF2122/97 MMAGLRICARIAQARPLRDLLGSIARPRNSTELDEATLELALATCSHTLY
Rv1279|M.tuberculosis_H37Rv MMAGLRICARIAQARPLRDLLGSIARPRNSTELDEATLELALATCSHTLY
MMAR_4141|M.marinum_M MMEGLRICARIAQAPALRGLLGPVARPHNSSELDEATLELALTTCSHTLY
MUL_4004|M.ulcerans_Agy99 MMEGLRICARIAQAPALRGLLGPVARPHNSSELDEATLELALTTCSHTLY
MAB_0250|M.abscessus_ATCC_1997 MMFGLRTTARIAETPSMRAVLGKILRPRNPSDDLEETLVAALENNSHTLY
TH_3275|M.thermoresistible__bu LTAAGRKVREIFQSPAMRPHVIAENAPSR-GVETDDEWAEFIRNHCFGGS
MAV_4980|M.avium_104 MIEGLRIGRKIGMSQALDPWRAEELAPGD-DAVDDAALRSYIQRSVASYF
Mflv_1255|M.gilvum_PYR-GCK TAALVRRMRSIFEQSPIAERISHETYPGPRVDSDEELVDAALEGG-YCGY
MSMEG_0526|M.smegmatis_MC2_155 TADLLRRMRAVFAESPIAERISHETFPGPGVATDDELVDSALDGG-YCGY
Mvan_5894|M.vanbaalenii_PYR-1 GAALFRTMRRLFSQSPVADHLVAETRPGADVSSDQAIIDAALTQG-YCGY
* : .: * : :
Mb1310|M.bovis_AF2122/97 HPMGTCRMGSD--EASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPS
Rv1279|M.tuberculosis_H37Rv HPMGTCRMGSD--EASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPS
MMAR_4141|M.marinum_M HPLGTCRMGSD--EASVVDPQLRVRGVDGLRVADASVMPSTVRGHTHAPS
MUL_4004|M.ulcerans_Agy99 HPLGTCRMGSD--EASVVDRQLRVRGVDGLRVADASVMPSTVRGHTHAPS
MAB_0250|M.abscessus_ATCC_1997 HPVGTCRMGAD--DASVVTPDLTVRGVQGLRVVDASVIPSLIRGHTHAPS
TH_3275|M.thermoresistible__bu HWVGTARMGADSDPDAVVDPQLRVRGVSGLRVADASVMPTLTSGNTNAPC
MAV_4980|M.avium_104 HPVGTCAMGTG--PESVVDNQLRLHGIDNLRVIDASVMPSLPSNNTAATV
Mflv_1255|M.gilvum_PYR-GCK HAVGTCAMGPD--DDDVVDSHLRVRGVDGLRVVDCSVMPTIVAGNLNGPI
MSMEG_0526|M.smegmatis_MC2_155 HAVGTCAMGPG--DDAVVDDRLRVRGVDGLRVVDCSVLPTMVAGNLNGPI
Mvan_5894|M.vanbaalenii_PYR-1 HAIGTCAMGPE--DDDVVDSALRVRGVRNLRIMDCSVMPTMVSGNLNGPV
* :**. **. ** * ::*: .**: *.**:*: .: ..
Mb1310|M.bovis_AF2122/97 VLIGEKAADLIRS---
Rv1279|M.tuberculosis_H37Rv VLIGEKAADLIRS---
MMAR_4141|M.marinum_M VLIGAKAADLIRN---
MUL_4004|M.ulcerans_Agy99 VLIGAKAADLIRN---
MAB_0250|M.abscessus_ATCC_1997 VLLGEKAADLILSPQP
TH_3275|M.thermoresistible__bu VLIGEKAAELIRGR--
MAV_4980|M.avium_104 YAIAERGADLVRLG--
Mflv_1255|M.gilvum_PYR-GCK MAMAWRAADFILHGR-
MSMEG_0526|M.smegmatis_MC2_155 MAVAWRAADFILDR--
Mvan_5894|M.vanbaalenii_PYR-1 MAMAWRASDLILSGG-
:. :.::::