For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2777 | - | - | 100% (338) | acyl-CoA dehydrogenase domain protein |
| M. thermoresistible (build 8) | TH_0804 | - | 2e-45 | 39.32% (323) | acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_4038 | - | 4e-44 | 34.69% (343) | PUTATIVE putative acyl-CoA dehydrogenase domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3594 | fadE33 | 1e-38 | 36.48% (318) | acyl-CoA dehydrogenase FADE33 |
| M. gilvum PYR-GCK | Mflv_1795 | - | 1e-112 | 63.20% (337) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv3564 | fadE33 | 1e-38 | 36.48% (318) | acyl-CoA dehydrogenase FADE33 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 2e-15 | 23.73% (375) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_3123 | - | 3e-45 | 35.64% (362) | putative acyl-CoA dehydrogenase |
| M. marinum M | MMAR_2861 | fadE18 | 1e-40 | 36.58% (339) | acyl-CoA dehydrogenase FadE18 |
| M. avium 104 | MAV_2570 | - | 2e-41 | 35.50% (338) | putative acyl-CoA dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_5618 | - | 1e-105 | 61.38% (347) | acyl-CoA dehydrogenase |
| M. ulcerans Agy99 | MUL_2893 | fadE18 | 7e-41 | 36.58% (339) | acyl-CoA dehydrogenase FadE18 |
| M. vanbaalenii PYR-1 | Mvan_4955 | - | 1e-108 | 61.61% (336) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1795|M.gilvum_PYR-GCK -----------------------------------MRAEFAEFHDELRSV
Mvan_4955|M.vanbaalenii_PYR-1 -----------------------------------MTHGFSEFHDELRSV
TH_2777|M.thermoresistible__bu -----------------------------------MTDQFTEFHDELRAV
MSMEG_5618|M.smegmatis_MC2_155 -------------------------------MMTDFTTDFSAIHDELRSV
Mb3594|M.bovis_AF2122/97 ---------------------------------MTPPEERQMLRETVASL
Rv3564|M.tuberculosis_H37Rv ---------------------------------MTPPEERQMLRETVASL
MMAR_2861|M.marinum_M -------------------------------MDFRYSTEQDDFRESLRGF
MUL_2893|M.ulcerans_Agy99 -------------------------------MDFRYSTEQDDFRESLRGF
MAV_2570|M.avium_104 -------------------------------MTALSADERQELAQSVRSA
MAB_3123|M.abscessus_ATCC_1997 MSASEDHQTRMSASEDNQTRMSASEDNQAQINEFEFTEEHGDLRSLVRSW
MLBr_00737|M.leprae_Br4923 ---------------------MVGWSGNPLFDLFKLPEEHNELRATIRAL
: : .
Mflv_1795|M.gilvum_PYR-GCK ASDLLAKDG---------------------HAPEWRVLADAGWTGLEVPD
Mvan_4955|M.vanbaalenii_PYR-1 AGDLLAKD----------------------RVVDWSVLVDAGWTGLEVPD
TH_2777|M.thermoresistible__bu AAEVLAKD----------------------RTVDWPVLADAGWVGLEVAD
MSMEG_5618|M.smegmatis_MC2_155 AADLLAKD-----------------------SVDWPLLVQAGWVGLDAPE
Mb3594|M.bovis_AF2122/97 VAKHAGPAAVRAAMASDR---------GYDESLWRLLCEQVGAAALVIPE
Rv3564|M.tuberculosis_H37Rv VAKHAGPAAVRAAMASDR---------GYDESLWRLLCEQVGAAALVIPE
MMAR_2861|M.marinum_M LRDQAPPARVRQVAAVG----------GHDKKLWHRLCAELELPALHAPP
MUL_2893|M.ulcerans_Agy99 LRDQAPPARVRQVAAVG----------GHDKKLWHRLCAELELPALHAPP
MAV_2570|M.avium_104 CERLASEDRVRAVAYAEGNRGGGDGHSGFDTVLWDVLCNQVGVAGIALPE
MAB_3123|M.abscessus_ATCC_1997 CERVWTPKHVRQIAEAGS----------VDLDAWRALGSELGVVGLSLPE
MLBr_00737|M.leprae_Br4923 AEKEIAPHAADVDQRAR------------FPEEALAALNASGFNAIHVPE
.: .
Mflv_1795|M.gilvum_PYR-GCK TLGGAGASFAESAVILDQIGRAAGVTGYLGGAVLATGVLNLLRPSDSRDH
Mvan_4955|M.vanbaalenii_PYR-1 GLGGSGATFVETAMILDQIGRAASANRYLGSAVLAVGVLNLLEPSEIRDE
TH_2777|M.thermoresistible__bu EFGGAGASFGEVAVICSEMGRAATASSYLGGAVLGVGALNAVQPDAARDD
MSMEG_5618|M.smegmatis_MC2_155 SLGGAGATFAEVAVICEELGRAAATTGYLGGAVLGVGALLAVAPNTSRDN
Mb3594|M.bovis_AF2122/97 ELGGAGGELADAAIVVQELGRALVPSPLLG-TTLAELALLAAAKPDAQA-
Rv3564|M.tuberculosis_H37Rv ELGGAGGELADAAIVVQELGRALVPSPLLG-TTLAELALLAAAKPDAQA-
MMAR_2861|M.marinum_M EYGGAGGTLVETAIAFGELGRALTPVPFAA-TILAIEAILRMGDSEQRKG
MUL_2893|M.ulcerans_Agy99 EYGGAGGTLVETAIAFGELGRALTPVPFAA-TILAIEAILRMGDSEQRKG
MAV_2570|M.avium_104 HLGGAGYGVSALGVVAHELGRALAPVPFVGSTVLATGLLLDLTERDPDAD
MAB_3123|M.abscessus_ATCC_1997 QHGGGGLGVIELSIVAEELGRALACLPWISSAALGATALVSSGDDSALAE
MLBr_00737|M.leprae_Br4923 EYGGQGADSVAACIVIEEVARVDASASLIPAVNKLGTMGLILRGSEELKK
** * : ::.*. .
Mflv_1795|M.gilvum_PYR-GCK L-LAAVAGGEPRLAVVTG--------------DFSMS-AGKLTGRAEFVP
Mvan_4955|M.vanbaalenii_PYR-1 L-LTAVASGPGRLGVATD--------------GFAVN-GGRLAGRAGFVP
TH_2777|M.thermoresistible__bu L-LTAVAAGAERTALVLG--------------PFTFT-GGRLTGRAEFVP
MSMEG_5618|M.smegmatis_MC2_155 L-LTEVVEGRTRVSLALPG----DLVPGDPRVPFTVTTDGRVHGRAAFVP
Mb3594|M.bovis_AF2122/97 --LTELAQGSAIGALVLD-----PDY----------------------VV
Rv3564|M.tuberculosis_H37Rv --LTELAQGSAIGALVLD-----PDY----------------------VV
MMAR_2861|M.marinum_M L-LSGLLSGDRIGALAAAG----PDLSVTSVRAGRRDGRPVLTGECAPVL
MUL_2893|M.ulcerans_Agy99 L-LSGLLSGDRIGALAAAG----PDLSVTSVRAGRRDGRPVLTGECAPVL
MAV_2570|M.avium_104 KRLTGLIEGRRTAAAALTGDGGLWRRSAVTLRAARAGDDWNIDGTVRHVL
MAB_3123|M.abscessus_ATCC_1997 W-VPALAAGEKTITLAGGR---TRLADAITVSAESDTDGWKLTGDTEHVP
MLBr_00737|M.leprae_Br4923 QVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWIT
:. : . :
Mflv_1795|M.gilvum_PYR-GCK DAVGADRLLVVTG-------PEVAVVETAAATVT--------AQPVVDET
Mvan_4955|M.vanbaalenii_PYR-1 DAVGADRLLVLVD-------GAVAVVDAAQMSVV--------PQPVVDET
TH_2777|M.thermoresistible__bu DASGADRLLVLATDSD----GTPVLTATAAATVT--------AQPVLDET
MSMEG_5618|M.smegmatis_MC2_155 DAGDAHRLLLPARDAT----GTTVLVD-AAATVI--------EQPVLDET
Mb3594|M.bovis_AF2122/97 NGDIAD-IVVAATS------GQLTRWTRFSAQP----------VATMDPT
Rv3564|M.tuberculosis_H37Rv NGDIAD-IVVAATS------GQLTRWTRFSAQP----------VATMDPT
MMAR_2861|M.marinum_M HGHVAD-LFVVPAESD----GAVILYVVDAAAPGVAV----VGLPSFDIT
MUL_2893|M.ulcerans_Agy99 HGHVAD-LFVVPAESD----GAVILYVVDAAAPGVAV----VGLPSFDIT
MAV_2570|M.avium_104 GGSVADDLVVVAIDED----GEPAVFLLDPTIDSVVA----EAERVLDRT
MAB_3123|M.abscessus_ATCC_1997 DGATADVILVLADTD-----SGPSLFAVDGDAPGVDR----HSLATLDMT
MLBr_00737|M.leprae_Br4923 NGGKSTWYTVMAVTDPDKGANGISAFIVHKDDEGFSIGPKEKKLGIKGSP
. : : . .
Mflv_1795|M.gilvum_PYR-GCK RRLATVAADSATVVDILTFDGNPADAVNALRHRAEIAVACDSLGVAEQML
Mvan_4955|M.vanbaalenii_PYR-1 RQLATVTAEAAEIAELLTLAGDPAS----VRHRAEVAIACDSLGLAEQML
TH_2777|M.thermoresistible__bu RRLAVVCAEDSGVEAVWRFAGDPRAAARRLADRAAVAVAIDSLGLAEAML
MSMEG_5618|M.smegmatis_MC2_155 RRLAIVEADGAEARDVWPLE-DPHA----LARRAALAVACDSLGIAAAML
Mb3594|M.bovis_AF2122/97 RRLARLQSE--ETEPLCPDPG--------IADTAAILLAAEQIGAAERCL
Rv3564|M.tuberculosis_H37Rv RRLARLQSE--ETEPLCPDPG--------IADTAAILLAAEQIGAAERCL
MMAR_2861|M.marinum_M RPVAKLRLVRAPAEALAASSAD--E-VARLLDVARVLLAAEMLGGAEACL
MUL_2893|M.ulcerans_Agy99 RPVAKLRLVRAPAEALAASSAD--E-VARLLDVARVLLAAEMLGGAEACL
MAV_2570|M.avium_104 RPMATITLSSAPALRLSGDAPLGDV-VDRNVDIALAVLSAEQVGACERVL
MAB_3123|M.abscessus_ATCC_1997 RRQANIHFNSAPARLIGAQGRGAEA-VATALDVAATVLAAEQAGIAAHML
MLBr_00737|M.leprae_Br4923 TTELYFDKCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGAL
. : : :. : * . *
Mflv_1795|M.gilvum_PYR-GCK SDTVDYVKVRHQFGRPIGSFQAVKHACADMLVAVEVSRQLVADAVDVLAG
Mvan_4955|M.vanbaalenii_PYR-1 AATVDYVLVRHQFGRPIGSFQAVKHACADMLVAIEVSRRLVSDAVGVLAE
TH_2777|M.thermoresistible__bu SATVSYAKVRHQFGRPIGSFQAVKHACADMQVQITVARQLVGRAVAALCD
MSMEG_5618|M.smegmatis_MC2_155 DATVSYASMRQQFGRPIGSFQAVKHACADMLVQVTAARQLIAGAIS----
Mb3594|M.bovis_AF2122/97 QLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVV--ADACHAP
Rv3564|M.tuberculosis_H37Rv QLTVEYAKSRVQFGRPIGSFQALKHRMADLYVTIAAARAVV--ADACHAP
MMAR_2861|M.marinum_M DLAIEYACSRKQFDRPIGSFQAVKHRCADMMIEIDATRAAVMFAQLCAAG
MUL_2893|M.ulcerans_Agy99 DLAIEYACSRKQFDRPIGSFQAVKHRCADMMIEIDATRAAVMFAQLCAAG
MAV_2570|M.avium_104 EIATDYARTREQFGRQIGSFQAIKHKCADMLVDLEWARSASQAALEALDD
MAB_3123|M.abscessus_ATCC_1997 DVTTEYAKSRIQFGRIIGSFQAVKHRLADMAAATGNVRGAAYHAAWSHDH
MLBr_00737|M.leprae_Br4923 DAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAER
: *. * **.. *.:**:::. **: * *
Mflv_1795|M.gilvum_PYR-GCK --GGDAAIP---AAMAKSYVCAAAVEVAGKAMQLHGGIGYTWESGIHTYL
Mvan_4955|M.vanbaalenii_PYR-1 --GGDAATQ---AAMAKSHACSAAVDVAGKAMQLHGGIGYTWESGIHVYL
TH_2777|M.thermoresistible__bu PDSDDTAAA---AAMAKSFVCSAAVEVVGKAMQLHGGIGYTWESGVHVYL
MSMEG_5618|M.smegmatis_MC2_155 ---APDAHT---VAKAKSYATEAAVGVAGKAMQLHGGIGYTWESGVHTYL
Mb3594|M.bovis_AF2122/97 TPTNAATAR-----LAASEALST---AAAEGIQLHGGIAITWEHDMHLYF
Rv3564|M.tuberculosis_H37Rv TPTNAATAR-----LAASEALST---AAAEGIQLHGGIAITWEHDMHLYF
MMAR_2861|M.marinum_M GDELHATAP-----LAKAQAADTYVLCAGSAIQVHGGIAFTWEHDLHLYF
MUL_2893|M.ulcerans_Agy99 GDELHATAP-----LAKAQAAGTYVLCAGSAIQVHGGIAFTWEHDLHLYF
MAV_2570|M.avium_104 PDSAAAGEAGWRASMAKAVCSEALRNATKANVQIHGGIGFTWEDSAHLYF
MAB_3123|M.abscessus_ATCC_1997 PSLDDPALAT---SIAQQVASAGAVEVTAKAIQSHGGIGFTWEHPAHLYY
MLBr_00737|M.leprae_Br4923 GEPDLGFIS----AASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFM
: . :* .** . * : . :
Mflv_1795|M.gilvum_PYR-GCK KRATLNRSLFGSPAAQRRRLSQRYH-------------------------
Mvan_4955|M.vanbaalenii_PYR-1 KRATLNRALFGSPAAQRKRLSQRYSKGI----------------------
TH_2777|M.thermoresistible__bu KRATLNRALYGSPAAHRSQLVSRYR-------------------------
MSMEG_5618|M.smegmatis_MC2_155 KRAALNRSLFGSPREHRTMLSARYRSAPG---------------------
Mb3594|M.bovis_AF2122/97 KRAHGSAQLLESPREVLRRLESEVWESP----------------------
Rv3564|M.tuberculosis_H37Rv KRAHGSAQLLESPREVLRRLESEVWESP----------------------
MMAR_2861|M.marinum_M RRAKTTEALFGSSAHHRSLLADRVGL------------------------
MUL_2893|M.ulcerans_Agy99 RRAKTTEALFGSSAHHRSLLADRVGL------------------------
MAV_2570|M.avium_104 RRARTDEVLLGAPGQHWDRLSTLDPSTQPPASPEVTKELNDVDALRAEIR
MAB_3123|M.abscessus_ATCC_1997 KRAVSNSALFGGRAVHAERIAKEVIDA-----------------------
MLBr_00737|M.leprae_Br4923 RDAKITQIYEGTNQIQRVVMSRALLR------------------------
: * :
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 SFLDNAPRPAGLRNYGPTPTADDVEAGRVWHRYLADHGYACLHWPREFGG
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 AAATVTYQAVFAEECARAEVPRQVNITGADLVGPVLIKFGSQEQKDRYLE
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 PIRLGDDVWCQLFSEPGAGSDLAGVRTRAERTTTGWRIDGQKVWSSAAAS
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 ARFGLLLARTGPDKHRDLSMFVVPMDIPGVTVRPLTQMDGESKFNEVFFD
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 GAELDEDALIGEVGQGWTVAMVTLGRERLTLGSQAVSMFRLHERMVDAAR
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 DHDLLDPVLSRSMTRLWARMWLLRFTWQRAIDSGDLTSPAFSVLKLMTSE
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4955|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_2777|M.thermoresistible__bu --------------------------------------------------
MSMEG_5618|M.smegmatis_MC2_155 --------------------------------------------------
Mb3594|M.bovis_AF2122/97 --------------------------------------------------
Rv3564|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_2861|M.marinum_M --------------------------------------------------
MUL_2893|M.ulcerans_Agy99 --------------------------------------------------
MAV_2570|M.avium_104 TDQDLGDMATEVLGTDACTDPEEDGLVHHMLIGRAQTILGGTSEIQRNIL
MAB_3123|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
Mflv_1795|M.gilvum_PYR-GCK ------------
Mvan_4955|M.vanbaalenii_PYR-1 ------------
TH_2777|M.thermoresistible__bu ------------
MSMEG_5618|M.smegmatis_MC2_155 ------------
Mb3594|M.bovis_AF2122/97 ------------
Rv3564|M.tuberculosis_H37Rv ------------
MMAR_2861|M.marinum_M ------------
MUL_2893|M.ulcerans_Agy99 ------------
MAV_2570|M.avium_104 GERVLGLPKEPR
MAB_3123|M.abscessus_ATCC_1997 ------------
MLBr_00737|M.leprae_Br4923 ------------