For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2478 | - | - | 100% (264) | putative regulatory protein GntR, HTH |
| M. thermoresistible (build 8) | TH_4465 | - | 3e-46 | 41.83% (251) | PUTATIVE putative hydride transferase 1 |
| M. thermoresistible (build 8) | TH_2873 | - | 1e-21 | 27.16% (232) | PUTATIVE regulatory protein GntR, HTH |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3086c | - | 3e-16 | 28.07% (228) | GntR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2114 | - | 5e-21 | 29.26% (229) | GntR domain-containing protein |
| M. tuberculosis H37Rv | Rv3060c | - | 3e-16 | 28.07% (228) | GntR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4644c | - | 4e-09 | 27.43% (226) | GntR family transcriptional regulator |
| M. marinum M | MMAR_1630 | - | 2e-19 | 28.75% (240) | transcriptional regulatory protein |
| M. avium 104 | MAV_1821 | - | 6e-24 | 30.17% (232) | regulatory protein GntR, HTH |
| M. smegmatis MC2 155 | MSMEG_5201 | - | 2e-19 | 29.87% (231) | regulatory protein GntR, HTH |
| M. ulcerans Agy99 | MUL_3832 | - | 9e-14 | 24.37% (238) | FadR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_4590 | - | 2e-22 | 30.56% (252) | GntR domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2114|M.gilvum_PYR-GCK -----MARSTPLAPMIGPDAVASRTAVRSPKTAELVAGTLRRMVVEGQLK
Mvan_4590|M.vanbaalenii_PYR-1 -----MTRNTPLAPMIGPDAVASRAAVRSPKTAELVAGTLRRMVVEGQLK
MSMEG_5201|M.smegmatis_MC2_155 -----MAGSTPLAPMIGPDAITPRAAVRSPKTAELVAGTLRRMVVEGQLK
MAV_1821|M.avium_104 ---------------------MEVTSLREPKMADRVATVLRRMFIRGEIP
Mb3086c|M.bovis_AF2122/97 -------------------MSTEPDAVWTDKRASKIARRIEADIVRRGWP
Rv3060c|M.tuberculosis_H37Rv -------------------MSTEPDAVWTDKRASKIARRIEADIVRRGWP
MMAR_1630|M.marinum_M ----------------MGQLSVEPDVIRADKRAARVARHIEAEIVRRGWT
MUL_3832|M.ulcerans_Agy99 -------------MTALGIGPDPRRRLSAPRIAEIVADELRRQIIDGELA
MAB_4644c|M.abscessus_ATCC_199 ----------------------MHPRLSSQSLAEQVANILAAQIGDGRWS
TH_2478|M.thermoresistible__bu LTTQFTTSGLPVIYDPGMNHSGAPASARPPKASEITATRIVNDIVDQGLQ
: * : .
Mflv_2114|M.gilvum_PYR-GCK DGDFLPNEAELMAHFGVSRPTLREAVRVLESERLVEVRRGSRTGARVRVP
Mvan_4590|M.vanbaalenii_PYR-1 DGDFLPNEAELMAHFGVSRPTLREAVRVLESERLVEVRRGSRTGARVRVP
MSMEG_5201|M.smegmatis_MC2_155 DGDFLPNEAELMSHFGVSRPTLREAVRVLESERLVEVRRGSRTGARVRVP
MAV_1821|M.avium_104 EGTMLPPESELMERFGVSRPTLREAFRVLESESLIVVQRGVRGGARVTRP
Mb3086c|M.bovis_AF2122/97 IGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEP
Rv3060c|M.tuberculosis_H37Rv IGASLGSESALQQRFCVSRSVLREAVRLVEHHQVARMRRGPNGGLFICEP
MMAR_1630|M.marinum_M VGASLGSEGALQQRYGVSRSVLREAVRLVEHHQVARMRRGPNGGLLICAP
MUL_3832|M.ulcerans_Agy99 DGDLLPRQEVLVEQFNVSLVSLREALRILETEGLVSVRRGNRGGAVVHAP
MAB_4644c|M.abscessus_ATCC_199 TGAKLPGEVALCEEFGVSRATVREAIRDLKTKGLVSTRQG--AGVFVTSD
TH_2478|M.thermoresistible__bu VNDKLPGEAEMLAAYGVSRETLREALRILEVQGLIAIKRGPGGGPIVSAL
. * : : : ** :***.* :: . : ::* * :
Mflv_2114|M.gilvum_PYR-GCK GPEIVARPAGLLLELSGATIADLLTAKSAIEPMAARLLAE--SGSAAAFD
Mvan_4590|M.vanbaalenii_PYR-1 GPEIVARPAGLLLELSGATIADLLTAKSGIEPMAARLLAE--SGSPEAFD
MSMEG_5201|M.smegmatis_MC2_155 GPEIVARPVGLLLELSGADIADLLVARSAIEPMAARLLAE--NGTEEQFA
MAV_1821|M.avium_104 RRETLARYAGLILEYEGVTLKDVYDARVTLETPMIVQLAK--DRNPAVIA
Mb3086c|M.bovis_AF2122/97 NAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAE--HIDEPGIE
Rv3060c|M.tuberculosis_H37Rv NAGPATRAVVIYLEYLGTTIGDLLGARLVLEPLAASLAAE--HIDEPGIE
MMAR_1630|M.marinum_M DAGPATRAVVIYLEYLGITLGELLDARLVFEPLAASLAAE--HIDEAGID
MUL_3832|M.ulcerans_Agy99 AKASAAYMLGLLLQSESVAVSDLGAALQELEPACAALAAQRPDRADTLVP
MAB_4644c|M.abscessus_ATCC_199 RP-----LGQWDRVLAAAEIDAVVEIRRLLEVQAAGLAAERRNRSDVAAI
TH_2478|M.thermoresistible__bu NSYYLARTATMYFMLAGATYNELFEAWAVLEPPMSAKVAR--ISDTQMKK
. : :* *.
Mflv_2114|M.gilvum_PYR-GCK ELEQLLEELVADSHQSPRLAEATGAFHLRVVQLSGNATLSIVAGMLHEIT
Mvan_4590|M.vanbaalenii_PYR-1 ELERMLEELAADSHKSSRLAEATGLFHLRVVQLSGNATLSIVAGMLHEIT
MSMEG_5201|M.smegmatis_MC2_155 ELDRMLEEHIPSDWQSDRLAETTGDFHRRVVELSGNATLGIIAGMLHEIT
MAV_1821|M.avium_104 ELEQIVEREAELKPGSDTVDQLT-DFHAAIARLSGSKTLQIVSDMLHHIV
Mb3086c|M.bovis_AF2122/97 RLRAVLRAEERWRPG---LPPPPEQFYRVLAEQSKNPVLQLFIDILMRLT
Rv3060c|M.tuberculosis_H37Rv RLRAVLRAEERWRPG---LPPPPEQFYRVLAEQSKNPVLQLFIDILMRLT
MMAR_1630|M.marinum_M RLRAVLRAEEQRKPG---LPAVRDEFHVALARQSKNPVLQLFIEILMRLT
MUL_3832|M.ulcerans_Agy99 ELKRVNEAMSEHLDDGAMFTEIGRQFHDLIVRGCGNHTIIAVVGSLETLW
MAB_4644c|M.abscessus_ATCC_199 RRALVARAKAESAGDDIEYVDADLEFHRAVVAAVHN---PLLDELFDSFS
TH_2478|M.thermoresistible__bu EAFAAAEMSAELSSDRDEIFSAANNFHAVIAQMSGSRVLMLLTQAVNHIV
. . *: :. . . . :
Mflv_2114|M.gilvum_PYR-GCK VRHTAFVFNERRP----VSKADYETLLRSYRRLLQFLRSRDADGAEAHWR
Mvan_4590|M.vanbaalenii_PYR-1 VRHTAFVFNERRP----VSKADYDTLLRSYRKLMQFLRAGDAVGAEAHWR
MSMEG_5201|M.smegmatis_MC2_155 VRHHQFLFREHRP----VSKSDYDKLMRSYRKLMQIMRSGDGDAAEAHWR
MAV_1821|M.avium_104 EKANRSLQPTEGT----RAAQAVSRSAKTHRMVLDMIKAGEAEKAGELWK
Mb3086c|M.bovis_AF2122/97 KRYVQKSGTQSAG----EAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSE
Rv3060c|M.tuberculosis_H37Rv KRYVQKSGTQSAG----EAVEAAGQVHNEHSDIVAAVTAGDSAWAKTLSE
MMAR_1630|M.marinum_M RRYALTSRTDTVA----EAFEAVDQMHNDHAAIAAAVTAGDSARAKTLSE
MUL_3832|M.ulcerans_Agy99 TSHEQQWADESAARGTYPSLAKRRAVLNAHIKLTETIAEGDVDRARRIAG
MAB_4644c|M.abscessus_ATCC_199 VRMREAMLALLAG------SAERPHDQEHHQWLFDAIVDGSTRRAVELAT
TH_2478|M.thermoresistible__bu VDHVLASGEMMPS----------STISHSHADIAHAIISGWPRRAESLMR
. : : : *
Mflv_2114|M.gilvum_PYR-GCK RHLDKTRELLLAG--------------------------LESVPVRDVMG
Mvan_4590|M.vanbaalenii_PYR-1 KHLDTTRELLLTG--------------------------LESVPVRDVMG
MSMEG_5201|M.smegmatis_MC2_155 THLDTARALMLQG--------------------------LESVKVRDVMG
MAV_1821|M.avium_104 KHLQKAEAFVLSG--------------------------AELSTVVDLLE
Mb3086c|M.bovis_AF2122/97 RHVEAVAGWLQQHQRGNDAAVRNGGRAREPRRAQQLILGAPRGKLAEVLA
Rv3060c|M.tuberculosis_H37Rv RHVEAVAGWLQQHQRGNDAAVRNGGRAREPRRAQQLILGAPRGKLAEVLA
MMAR_1630|M.marinum_M QHVQQVTGWLQQHQPGGDAKL-----AHVPRRSLRLDSETPPGKLAEVLA
MUL_3832|M.ulcerans_Agy99 RHLADTQTYVLSG--------------------------RAEQRIYALSP
MAB_4644c|M.abscessus_ATCC_199 DQLQHVRMR-----------------------------------------
TH_2478|M.thermoresistible__bu DHIEEVRDFVRDR---------------------------QPERMDDVIQ
:: .
Mflv_2114|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4590|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5201|M.smegmatis_MC2_155 --------------------------------------------------
MAV_1821|M.avium_104 --------------------------------------------------
Mb3086c|M.bovis_AF2122/97 ATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHM
Rv3060c|M.tuberculosis_H37Rv ATIGDDIAASGWQVGSVFGTETALLERYQVSRAVLREAVRLLEYHAIAHM
MMAR_1630|M.marinum_M ATIADDIAASGWQLDSVFGTETALLQRYRVSRAALREAVRLLEYHSVARM
MUL_3832|M.ulcerans_Agy99 QALSRPRDMRRP--------------------------------------
MAB_4644c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2478|M.thermoresistible__bu WR------------------------------------------------
Mflv_2114|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4590|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5201|M.smegmatis_MC2_155 --------------------------------------------------
MAV_1821|M.avium_104 --------------------------------------------------
Mb3086c|M.bovis_AF2122/97 RRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAK
Rv3060c|M.tuberculosis_H37Rv RRGPGGGLVVTTPQPQASIDTIALYLQYRKPSREDLRCVRDAIEIDNVAK
MMAR_1630|M.marinum_M RRGPGGGLVVTKPQSQASIDTIALYLQYRQPSREDLRCVRDAIEIANVAK
MUL_3832|M.ulcerans_Agy99 --------------------------------------------------
MAB_4644c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2478|M.thermoresistible__bu --------------------------------------------------
Mflv_2114|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4590|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5201|M.smegmatis_MC2_155 --------------------------------------------------
MAV_1821|M.avium_104 --------------------------------------------------
Mb3086c|M.bovis_AF2122/97 VVKRRSEPEVASFLDTLGRP---RLDNPTDDVRAAAVEEFRFHVGLARAA
Rv3060c|M.tuberculosis_H37Rv VVKRRSEPEVASFLDTLGRP---RLDNPTDDVRAAAVEEFRFHVGLARAA
MMAR_1630|M.marinum_M VVEQRARPEVASVLDELVVASDFAFEDAADAARKVAVEEFGFHVGLAQLA
MUL_3832|M.ulcerans_Agy99 --------------------------------------------------
MAB_4644c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2478|M.thermoresistible__bu --------------------------------------------------
Mflv_2114|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_4590|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5201|M.smegmatis_MC2_155 --------------------------------------------------
MAV_1821|M.avium_104 --------------------------------------------------
Mb3086c|M.bovis_AF2122/97 GNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSG
Rv3060c|M.tuberculosis_H37Rv GNTMLDLFLLILVELFRRHLSSTEQALPTWSDVVAVGHAHVRILEAIGSG
MMAR_1630|M.marinum_M GNALLDLFLRIIVELFQRHWSSTEHQQPTFNDVGAVEHAHQRIREAIIAG
MUL_3832|M.ulcerans_Agy99 --------------------------------------------------
MAB_4644c|M.abscessus_ATCC_199 --------------------------------------------------
TH_2478|M.thermoresistible__bu --------------------------------------------------
Mflv_2114|M.gilvum_PYR-GCK ---------------------
Mvan_4590|M.vanbaalenii_PYR-1 ---------------------
MSMEG_5201|M.smegmatis_MC2_155 ---------------------
MAV_1821|M.avium_104 ---------------------
Mb3086c|M.bovis_AF2122/97 DDSLARCRTRRHLDAAASWWL
Rv3060c|M.tuberculosis_H37Rv DDSLARCRTRRHLDAAASWWL
MMAR_1630|M.marinum_M DDSLARYRIRRHLDAAASWWL
MUL_3832|M.ulcerans_Agy99 ---------------------
MAB_4644c|M.abscessus_ATCC_199 ---------------------
TH_2478|M.thermoresistible__bu ---------------------