For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4465 | - | - | 100% (598) | putative hydride transferase 1 |
| M. thermoresistible (build 8) | TH_2478 | - | 8e-46 | 41.83% (251) | PUTATIVE putative regulatory protein GntR, HTH |
| M. thermoresistible (build 8) | TH_4081 | - | 2e-31 | 32.45% (265) | PUTATIVE putative hydride transferase 1 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0965c | - | 1e-25 | 29.44% (248) | oxidoreductase |
| M. gilvum PYR-GCK | Mflv_4839 | - | 7e-31 | 34.41% (247) | luciferase family protein |
| M. tuberculosis H37Rv | Rv0940c | - | 1e-25 | 29.44% (248) | oxidoreductase |
| M. leprae Br4923 | MLBr_00348 | - | 9e-15 | 28.57% (203) | putative coenzyme F420-dependent oxidoreductase |
| M. abscessus ATCC 19977 | MAB_0366 | - | 1e-22 | 31.51% (219) | hypothetical protein MAB_0366 |
| M. marinum M | MMAR_1586 | - | 4e-32 | 37.50% (208) | oxidoreductase |
| M. avium 104 | MAV_2247 | - | 7e-30 | 31.95% (266) | hypothetical protein MAV_2247 |
| M. smegmatis MC2 155 | MSMEG_2811 | - | 2e-34 | 34.09% (264) | hydride transferase 1 |
| M. ulcerans Agy99 | MUL_3448 | - | 1e-31 | 37.50% (208) | oxidoreductase |
| M. vanbaalenii PYR-1 | Mvan_3595 | - | 1e-27 | 33.64% (214) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0965c|M.bovis_AF2122/97 -----MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIPDSIAYPFESDSK
Rv0940c|M.tuberculosis_H37Rv -----MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIPDSIAYPFESDSK
MAV_2247|M.avium_104 -----MRFYVSSAFLNTREIIEIARAADELGYDGIGIPDHVVNLETLDTP
Mvan_3595|M.vanbaalenii_PYR-1 -----MKFYVSTAFLDTREAVEIAKAADDLGYHGMAIPDHVINLETLQTP
MMAR_1586|M.marinum_M MQLGLHA-LGIGAGADRSMIDAVACAADDAGFATLWAGEHVVMVDRHTSR
MUL_3448|M.ulcerans_Agy99 MQLGLHA-LEIGAGADRSMIDAVACAADDAGFATLWAGEHVVMVDRHTSR
MSMEG_2811|M.smegmatis_MC2_155 MQISLHA-LGIGAGARREIIDAVAVAAERAGFTTLWCGEHVVMVDRPRSR
Mflv_4839|M.gilvum_PYR-GCK ------------------MIDAVAASAERSGFETLWFGDQVVMADEDGPH
MAB_0366|M.abscessus_ATCC_1997 MKIGVVAPVELGVTAEPDKILEFARAAERLGFSEISVVEHAVVIGDTQST
TH_4465|M.thermoresistible__bu ----LATIGLSAYGMAGGELVELAACADELGFDTLWLGEHVVRPLTQRSA
MLBr_00348|M.leprae_Br4923 -------------MVERANAMKLGLQLGYWAAQPPGNAAELVAAAEGAGF
.. .
Mb0965c|M.bovis_AF2122/97 YPYTPDGNRE----FMDGKPFIETFVLTAALGAVTTRLRFNFFVLKLPIR
Rv0940c|M.tuberculosis_H37Rv YPYTPDGNRE----FMDGKPFIETFVLTAALGAVTTRLRFNFFVLKLPIR
MAV_2247|M.avium_104 YPYTRDGQRR----WQPFTDWPDPWVLIGALAQVTTRLRFVNTVYIPAMR
Mvan_3595|M.vanbaalenii_PYR-1 YPYTKDGQRR----WEAFTDWPDPWVMIGAIALATTRLRFVTTVYLPAMR
MMAR_1586|M.marinum_M YPYSEDGVIA----IPPQADWLDPMIALSFAAAASSRITVATGVLLLPEH
MUL_3448|M.ulcerans_Agy99 YPYSEDGVIA----IPPQADWLDPMIALSFAAASSSRITVATGVLLLPEH
MSMEG_2811|M.smegmatis_MC2_155 YPYSADGRIA----VAADADWLDPMIALSFAAAATSTIRIATGVLLLPEH
Mflv_4839|M.gilvum_PYR-GCK HPYRDDGEIP----ASAQTDWLDPLIALSFAAAATNRIELATGVLVLPER
MAB_0366|M.abscessus_ATCC_1997 YPYSPTGQSH----LPDDIDIPDPLELLSFVAAATTTLGLSTGVLVLPDH
TH_4465|M.thermoresistible__bu HPTSGTRQHHSGPLVAERTELIDPWAVHAAIAAVTTGIKLGTAVYVAALR
MLBr_00348|M.leprae_Br4923 DAVFTGEAWG-----------SDAYTPLAWWGSSTQRVRLGTSVVQLSAR
. :. . . : : . * . :
Mb0965c|M.bovis_AF2122/97 PPALVAKQAGSLAALIGNRVGLGVGTSPWPEDYELMGVPFAKRGKRIDEC
Rv0940c|M.tuberculosis_H37Rv PPALVAKQAGSLAALIGNRVGLGVGTSPWPEDYELMGVPFAKRGKRIDEC
MAV_2247|M.avium_104 NPYSAAKAIGTAAVLASGRVELGVGVGWCREEFALMGERFEARGKRTDEI
Mvan_3595|M.vanbaalenii_PYR-1 DPYSAAKAIGTAAVLAGGRLELGVGVGWCREEFELLGQQFERRGRRTDEM
MMAR_1586|M.marinum_M NPVVVAKQAASLDRLSGGRLTLGVGVGWSREEFAALGVPFQDRAGRTAEY
MUL_3448|M.ulcerans_Agy99 NPVVVAKQAASLDRLSGGRLTLGVGVGWSREEFAALGVPFQDRVGRTAEY
MSMEG_2811|M.smegmatis_MC2_155 NPVIMAKQAASVDQLSGGRLLLGVGIGWSREEFEALGVPFARRGARTAEY
Mflv_4839|M.gilvum_PYR-GCK NPVVTAKQAASLDRMTGGRLTLGVGIGISPQEYDALGVPFASRGARLAEY
MAB_0366|M.abscessus_ATCC_1997 HPVVLAKRLATLDRLSRGRLRICAGVGWMREEIEACGGDFDRRGRAADEA
TH_4465|M.thermoresistible__bu HPLHTARTTITVQELSGGRVVFGVGVGWLEEEFDAFDVPFRTRVSRTEEC
MLBr_00348|M.leprae_Br4923 TPTACAMAALTLDHLSGGRHILGLGVSGPQVVEGWYGQPFPKPLSRTREY
* * : : .* : * . . * *
Mb0965c|M.bovis_AF2122/97 IEIVRGLTTGD-YFEFHGEFYDIP--KTKMT----------PAPTQPIPI
Rv0940c|M.tuberculosis_H37Rv IEIVRGLTTGD-YFEFHGEFYDIP--KTKMT----------PAPTQPIPI
MAV_2247|M.avium_104 IELMRALWAPG-WTEFEGEFYSAP--RLEMQ----------PTP-PPIPV
Mvan_3595|M.vanbaalenii_PYR-1 LELMKALWSPG-WTEFSGEFYTAP--RMEME----------PTP-PPIPI
MMAR_1586|M.marinum_M VAAMRTLWRDD-LASFTGEFVRFDSVRVNPK----------PVRDRRVPV
MUL_3448|M.ulcerans_Agy99 VAAMRTLWRDD-LASFTGEFVRFDSVRVNPK----------PVRDRRVPV
MSMEG_2811|M.smegmatis_MC2_155 VEAMRTLWRQD-VADFTGEFAAFDAVRLHPK----------PSAG-SIPI
Mflv_4839|M.gilvum_PYR-GCK VGAMRTLWRDD-DASFAGRYVAFDGVRANPK----------PQGR-SIPV
MAB_0366|M.abscessus_ATCC_1997 IAVMRALWSTDGPTSHDGEFYSFRNAYSYPK----------PVRPQGVPL
TH_4465|M.thermoresistible__bu LAILRAAWRGE-PFSHHGRHFRIDRVQVHSR----------PVD---IPV
MLBr_00348|M.leprae_Br4923 IDIVRQVWAREAPVVSDGQHYPLPLTGAGATGLGKALKPITHPLRADIPI
: :: *.. :*:
Mb0965c|M.bovis_AF2122/97 LVGGHADAALRRAARA-DGWMHG-GGDPDELDRLIARVKRLREEAGK---
Rv0940c|M.tuberculosis_H37Rv LVGGHADAALRRAARA-DGWMHG-GGDPDELDRLIARVKRLREEAGK---
MAV_2247|M.avium_104 YVGGLSDIALRRAARS-DGWIGD-LIKTERAIEAVGRLRELRAENGL---
Mvan_3595|M.vanbaalenii_PYR-1 YVGGLSDIALRRAARH-DGWIGD-LITTDKALERIATLRGLRAENGL---
MMAR_1586|M.marinum_M MVGGNSDAALRRVAAWADGWYGFNLDGVGAVRERVGTLDRLCAESGR---
MUL_3448|M.ulcerans_Agy99 MVGGNSDAALRRVAAWADGWYGFNLDGVGAVRERVGTLDRLCAESGR---
MSMEG_2811|M.smegmatis_MC2_155 IVGGNGDRALARVASWGDGWYGFNLDGVAAVGERMDMLRRLCARAGR---
Mflv_4839|M.gilvum_PYR-GCK VLGGNSDAALRRVAEWGDGWYGFDLADVEEAAFRASKLRSMCREFGR---
MAB_0366|M.abscessus_ATCC_1997 YIGGHSKAAARRAGRLGSGFQPLGLVG-DDLTAAVGVMRAAAVDAGR---
TH_4465|M.thermoresistible__bu VLGGNGPKALARAATLGDGWFTSGTPEFDDALRMVREIRRVREQHGRPGP
MLBr_00348|M.leprae_Br4923 MLGAEGPKNVALAAEICDGWLPIFFSPRMADMYNEWLDEGFARTGARRSR
:*. . .. .*: .
Mb0965c|M.bovis_AF2122/97 -------------------TSP--FEIHVISLDGFTVDGVKRLEDKGVTD
Rv0940c|M.tuberculosis_H37Rv -------------------TSP--FEIHVISLDGFTVDGVKRLEDKGVTD
MAV_2247|M.avium_104 -------------------TMDD-FTILTPLTDAFTTADYRRAEDAGITG
Mvan_3595|M.vanbaalenii_PYR-1 -------------------DMHG-FEVITPLTDAFTAEHYERAEAGGITG
MMAR_1586|M.marinum_M -------------------NRD--ELRLSVALRCPQPCDVDALAELGIDE
MUL_3448|M.ulcerans_Agy99 -------------------NRD--ELRLSVALRCPQPCDVDALAELGIDE
MSMEG_2811|M.smegmatis_MC2_155 -------------------DVD--DLHCAVALQAPAVGDIPALVDLGVDE
Mflv_4839|M.gilvum_PYR-GCK -------------------DPT--ELKLSVALHDPVPADAVRLADAGIDE
MAB_0366|M.abscessus_ATCC_1997 -------------------DPRGLDLVLGHGLHRVDQAALDQAAHAGAGR
TH_4465|M.thermoresistible__bu FTCYVRIPSVDEVGRYRDHDMTDLVLWADTVWQGRTLDEKRDRLAAAADR
MLBr_00348|M.leprae_Br4923 ----------------EDFEICASAQIVVTEDRAAAFAGIKPFLALYMGG
Mb0965c|M.bovis_AF2122/97 VIVGFRVPYTMGPDTEPLQTKIRNLEMFAENVIAKV--------------
Rv0940c|M.tuberculosis_H37Rv VIVGFRVPYTMGPDTEPLQTKIRNLEMFAENVIAKV--------------
MAV_2247|M.avium_104 IIT-MPWMFYAGPQAS-LDDKIDGMQRFRKDLALDG--------------
Mvan_3595|M.vanbaalenii_PYR-1 IIT-MPWMFYSGPDAS-LPDKVDGMRRFRKDLGLD---------------
MMAR_1586|M.marinum_M LVLVETPPEAADAAQNWVSALAERWLSTVWVR------------------
MUL_3448|M.ulcerans_Agy99 LVLVETPPEAADAAQNWVSALAERWLSTVWVR------------------
MSMEG_2811|M.smegmatis_MC2_155 LVIVESPPQDPDVAADWVDALADRWITCI---------------------
Mflv_4839|M.gilvum_PYR-GCK LVLVAGPPADPIAAEAWIADLAGQWMRVRT--------------------
MAB_0366|M.abscessus_ATCC_1997 MLLSASRRATTLEAVLEEMAGCATRLELGGPR------------------
TH_4465|M.thermoresistible__bu LGLVSRSSGDPPAAAAGRSQRRRSGSALRMGDDVPRRVQNTGARSAGVRD
MLBr_00348|M.leprae_Br4923 MGAEGTNFHADVYRRMGYAEVVDEVTALFRSNQKDKAAEIIPNELVDSTM
:
Mb0965c|M.bovis_AF2122/97 --------------------------------------------------
Rv0940c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2247|M.avium_104 --------------------------------------------------
Mvan_3595|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_1586|M.marinum_M --------------------------------------------------
MUL_3448|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4839|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0366|M.abscessus_ATCC_1997 --------------------------------------------------
TH_4465|M.thermoresistible__bu TRPQNSRAGANGARTARDEHRGEVSLLRPLKAAESVARMIVDEIKTKGLQ
MLBr_00348|M.leprae_Br4923 IVGDVDYVCKQIAAWSAAGVTMMMVSASSVEQVRDLAGLF----------
Mb0965c|M.bovis_AF2122/97 --------------------------------------------------
Rv0940c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2247|M.avium_104 --------------------------------------------------
Mvan_3595|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_1586|M.marinum_M --------------------------------------------------
MUL_3448|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4839|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0366|M.abscessus_ATCC_1997 --------------------------------------------------
TH_4465|M.thermoresistible__bu PGDSLPLEATMLKQYGVSRESLREGLRLLEVQGMISIRRGPGGGPVVGTV
MLBr_00348|M.leprae_Br4923 --------------------------------------------------
Mb0965c|M.bovis_AF2122/97 --------------------------------------------------
Rv0940c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2247|M.avium_104 --------------------------------------------------
Mvan_3595|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_1586|M.marinum_M --------------------------------------------------
MUL_3448|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4839|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0366|M.abscessus_ATCC_1997 --------------------------------------------------
TH_4465|M.thermoresistible__bu DAGHLGRVSALFYNMADATYEELLEAWVWAEGELAERAARNPDAQLRSAR
MLBr_00348|M.leprae_Br4923 --------------------------------------------------
Mb0965c|M.bovis_AF2122/97 --------------------------------------------------
Rv0940c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2247|M.avium_104 --------------------------------------------------
Mvan_3595|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_1586|M.marinum_M --------------------------------------------------
MUL_3448|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4839|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0366|M.abscessus_ATCC_1997 --------------------------------------------------
TH_4465|M.thermoresistible__bu MTPYLTDHDGSAEGLAPYLEGHTAFHRAVADLSNNRVLALSLQTYGQIVS
MLBr_00348|M.leprae_Br4923 --------------------------------------------------
Mb0965c|M.bovis_AF2122/97 --------------------------------------------------
Rv0940c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_2247|M.avium_104 --------------------------------------------------
Mvan_3595|M.vanbaalenii_PYR-1 --------------------------------------------------
MMAR_1586|M.marinum_M --------------------------------------------------
MUL_3448|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_2811|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4839|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0366|M.abscessus_ATCC_1997 --------------------------------------------------
TH_4465|M.thermoresistible__bu HHVAVLSDPRSLRDVLVDEHRHIAEAVISGHARRARALMRSHLEGVTAFV
MLBr_00348|M.leprae_Br4923 --------------------------------------------------
Mb0965c|M.bovis_AF2122/97 ---------------
Rv0940c|M.tuberculosis_H37Rv ---------------
MAV_2247|M.avium_104 ---------------
Mvan_3595|M.vanbaalenii_PYR-1 ---------------
MMAR_1586|M.marinum_M ---------------
MUL_3448|M.ulcerans_Agy99 ---------------
MSMEG_2811|M.smegmatis_MC2_155 ---------------
Mflv_4839|M.gilvum_PYR-GCK ---------------
MAB_0366|M.abscessus_ATCC_1997 ---------------
TH_4465|M.thermoresistible__bu RENIPVPLDQPIEWL
MLBr_00348|M.leprae_Br4923 ---------------