For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2039 | - | 100% (409) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN | |
| M. thermoresistible (build 8) | TH_0390 | - | 2e-10 | 25.54% (368) | major facilitator superfamily protein permease |
| M. thermoresistible (build 8) | TH_0644 | narK2 | 3e-10 | 30.52% (154) | POSSIBLE NITRATE/NITRITE TRANSPORTER NARK2 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3018 | - | 1e-128 | 54.69% (426) | integral membrane protein |
| M. gilvum PYR-GCK | Mflv_4231 | - | 1e-157 | 69.44% (396) | major facilitator transporter |
| M. tuberculosis H37Rv | Rv2994 | - | 1e-128 | 54.69% (426) | integral membrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3302 | - | 1e-150 | 66.07% (392) | major facilitator transporter |
| M. marinum M | MMAR_1717 | - | 1e-133 | 58.17% (404) | integral membrane transport protein |
| M. avium 104 | MAV_3846 | - | 1e-126 | 55.94% (404) | sugar transporter family protein |
| M. smegmatis MC2 155 | MSMEG_2380 | - | 1e-168 | 73.72% (392) | sugar transporter family protein |
| M. ulcerans Agy99 | MUL_3155 | - | 4e-07 | 25.28% (439) | hypothetical protein MUL_3155 |
| M. vanbaalenii PYR-1 | Mvan_2131 | - | 1e-160 | 70.96% (396) | major facilitator superfamily transporter |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3018|M.bovis_AF2122/97 -----------------------------MSRDPTG-----VGARWAIMI
Rv2994|M.tuberculosis_H37Rv -----------------------------MSRDPTG-----VGARWAIMI
MMAR_1717|M.marinum_M -----------------------------MPDESSATQELSLSARWWIVI
MAV_3846|M.avium_104 MAGRRPQAPMTGNGTRPTPKYPGGMQAWGMQTDPVATPDVGAGTRWSIMV
Mflv_4231|M.gilvum_PYR-GCK ----------------------------------MAPSSIGPTRRWLMLA
Mvan_2131|M.vanbaalenii_PYR-1 --------------MSHIMRIWFSIVRRLCNHGAMPATAISSMRRWSMLA
MSMEG_2380|M.smegmatis_MC2_155 ------------------MELRFDILRSRDSMERMAAPVIGTLRRWSMLV
TH_2039|M.thermoresistible__bu ----------------------------------MPVSSISPARRWSMLV
MAB_3302|M.abscessus_ATCC_1997 ------------------------------MVTMVHVDEVGTARRWAMLA
MUL_3155|M.ulcerans_Agy99 ------------------------MTTNGRAIRGGLADAVGGPARMRVIV
* ::
Mb3018|M.bovis_AF2122/97 VSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMF
Rv2994|M.tuberculosis_H37Rv VSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMF
MMAR_1717|M.marinum_M VSLIVTASSFLFINGVAFLIPRLENARDTPLAEAGLLASMPSWGMVVTLV
MAV_3846|M.avium_104 VSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLASMPSWGMVVTLV
Mflv_4231|M.gilvum_PYR-GCK IGLLTTLCANVFINGVAFLIPTLHDERGLDLAGAALMSSLPSLGMVVTLI
Mvan_2131|M.vanbaalenii_PYR-1 IGLLATLCANVFINGVAFLIPTLHDERGLDLAAAGLMSSLPSLGMVVTLI
MSMEG_2380|M.smegmatis_MC2_155 IALTSTMCANVFINGAAFLIPTLHAERGLDLARSGLLSSMPSFGMVTTLI
TH_2039|M.thermoresistible__bu IALAATLFSVVFINGVAFVIPTLHREHGLSLAQAGLLSALPSFGMVATLI
MAB_3302|M.abscessus_ATCC_1997 IALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAMPSFGMVLTLI
MUL_3155|M.ulcerans_Agy99 LLALVVGLEGASNGTIGALAVVLKQAFGITNLQVGLLVTASTAIGIVVML
: . . . : *. . .*: : .: : .:.
Mb3018|M.bovis_AF2122/97 AWGYLLDHVG-ERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAA
Rv2994|M.tuberculosis_H37Rv AWGYLLDHVG-ERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAA
MMAR_1717|M.marinum_M AWGYVLDHVG-EQIVMTVGSALTAIAAYAAASVDSLLLMGIYLFLGGMAA
MAV_3846|M.avium_104 AWGYVLDRVG-ERVVMTTGSALTALAAYAASSAHSMVLIAVYLFLGGMAA
Mflv_4231|M.gilvum_PYR-GCK AWGYVVDRIG-ERAVLTAGSALTAAASFAAASMDTLLTTGIFLFLGGMAA
Mvan_2131|M.vanbaalenii_PYR-1 AWGYVVDRVG-ERVVLTLGSALTAAAAFAAAAADTLLTTGVFLFLGGMAA
MSMEG_2380|M.smegmatis_MC2_155 AWGYVVDRFG-ERLVLGLGSALTAAAALAAASVQSLFAVGLFLLLGGMAA
TH_2039|M.thermoresistible__bu AWGYLVDRIG-ERIVLTVGSALTAASAFAAAAVDSLLLVGVFLLLGGMAA
MAB_3302|M.abscessus_ATCC_1997 AWGALIDKFG-ERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAA
MUL_3155|M.ulcerans_Agy99 VSGTLADRVNRTRVLWITVLIWSVAMALGGISAGYGWLLASRVALGAVVA
. * : *:.. : :. : .. . : **. .*
Mb3018|M.bovis_AF2122/97 GGCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELAE-RG
Rv2994|M.tuberculosis_H37Rv GGCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELAE-RG
MMAR_1717|M.marinum_M ASCNSAGGRLVSGWFPPHQRGLAMGIRQTAQPLGIALGALVIPELAE-HS
MAV_3846|M.avium_104 ASCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAMVIPELAE-HG
Mflv_4231|M.gilvum_PYR-GCK ASSNTASARLVVGWFDAERRGLVMGIRQTAQPLGVGVGALVIPRLAESHG
Mvan_2131|M.vanbaalenii_PYR-1 ASSNTASGRLVVGWFDAERRGLVMGIRQTAQPLGVGVGALVIPRLAQAEG
MSMEG_2380|M.smegmatis_MC2_155 ASSNSASGRLVVGWFPPEQRGLVMGIRQTATPLGVGLGALVIPRLAESHG
TH_2039|M.thermoresistible__bu ASSNTASARVVVGWFPPHQRGLVMGIRQTAQPLGVALGALVIPRLAQSHG
MAB_3302|M.abscessus_ATCC_1997 AACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALVIPRIAEGHG
MUL_3155|M.ulcerans_Agy99 VG-GPVVASLMGDFFAQHERGRIYGFVLAGEGICTALGVLVSGWLAA-IT
. ... . :: :* ..** *: . : . *.:* :*
Mb3018|M.bovis_AF2122/97 VHAGLMFPAVVCTLAAVASVLGIVDPPRK-----SRTKASEQELASPYRG
Rv2994|M.tuberculosis_H37Rv VHAGLMFPAVVCTLAAVASVLGIVDPPRK-----SRTKASEQELASPYRG
MMAR_1717|M.marinum_M IHNALMFPAAFCTIAAVASLVGVVDPPRK-----SRKVASKEELASPYRG
MAV_3846|M.avium_104 PQAGLRFTALACVFGAVASVIGIVDPPRK-----PRASASDQELASPYRG
Mflv_4231|M.gilvum_PYR-GCK LSAALLFPAVVCAVSAVLCLAAVIDPPRP-----ARADAARTDLANPYRN
Mvan_2131|M.vanbaalenii_PYR-1 VSAALLFPAIVCAAAAVLCAIAVVDPPRP-----ARAEADDTDLANPYRG
MSMEG_2380|M.smegmatis_MC2_155 VSAALLFPAVVCGIAAVVSAVFVLDPPRP-----PRAEAPAEHLANPYRG
TH_2039|M.thermoresistible__bu ISAALLFPAAVCAVAAVICLIGVLDPPRP-----PRASADGRHPQNPYRG
MAB_3302|M.abscessus_ATCC_1997 VATALLFPAIVCAVSSAVCLVGIIDPPRP-----PRSEAPEEHLANPYRG
MUL_3155|M.ulcerans_Agy99 WRLSFLWLAVTGLLLTLALARTVPEPARGGDTFGASAGSDRRDCSNDTLA
.: : * : : :*.* . : . .
Mb3018|M.bovis_AF2122/97 SSILWR---IHAASALLMMPQTVTVTFMLVWLINHHGWSVAQAGVLVTIS
Rv2994|M.tuberculosis_H37Rv SSILWR---IHAASALLMMPQTVTVTFMLVWLINHHGWSVAQAGVLVTIS
MMAR_1717|M.marinum_M SAVLWR---IHASSALLMMPQTVTVTFMLVWLMNHHGWPVATAGILVTVS
MAV_3846|M.avium_104 SLTLWR---IHAVAGLMMMPQTVTVTFMLVWLIRNLHWSVAAAGALVTLS
Mflv_4231|M.gilvum_PYR-GCK SAMLWR---IHLTSVLLVIPQVVVWTFTLVWMISEHGWSPESAGVLVMVA
Mvan_2131|M.vanbaalenii_PYR-1 SPMLWR---IHLTSVLLVVPQVMVWTFTLVWLISEHRWSPESAGLLVMTA
MSMEG_2380|M.smegmatis_MC2_155 SSVLWR---IHAVSVLLVVPQGVLWTFALVWLITDRGWSAASAGILVTVT
TH_2039|M.thermoresistible__bu SGLLWR---IHAVSVLLVVPQGVIWTFTLVWLMTERSWSAGSAGTMVMIA
MAB_3302|M.abscessus_ATCC_1997 SRVLWL---IHGVSVLLVVPQVVVWTFTLVWLVTDRGWSIGAASVMVTVA
MUL_3155|M.ulcerans_Agy99 AAVIAQRVSAHPHLILQESPEGRSLRWAVGYVLKIR------TNVALMVA
: : * * *: : : ::: :. : :
Mb3018|M.bovis_AF2122/97 QLLGALGRVAVGRWS--------DHVGSRMRPVRLIAAAAAATLFLLAAV
Rv2994|M.tuberculosis_H37Rv QLLGALGRVAVGRWS--------DHVGSRMRPVRLIAAAAAATLFLLAAV
MMAR_1717|M.marinum_M QLLGALGRIAVGRWS--------DRVGSRMRPVRVIAIASAAALFLLALV
MAV_3846|M.avium_104 QLLGALGRVAVGRWS--------DRLGSRMRPVRYIAAAAVLVLLLLAWA
Mflv_4231|M.gilvum_PYR-GCK QIMGAAGRIGAGRWSDHYVRRSGDLLASRLRPIRIIAAAAAASMALLALT
Mvan_2131|M.vanbaalenii_PYR-1 QILGAAGRIGAGRWSDTFVRRSGDVIASRLRPIRMIAAAAAAAMALLAVT
MSMEG_2380|M.smegmatis_MC2_155 QLLGAGGRIAAGKWS--------DVIGYRLRPIRTIALAAAVTMAALALT
TH_2039|M.thermoresistible__bu QVLGAGGRVAAGRWS--------DLVGSRLRPIRTIALAAAAAMALLALT
MAB_3302|M.abscessus_ATCC_1997 QLVGALGRVAAGMWS--------DRWGSRMRPIRAIAAAASATMALLAVT
MUL_3155|M.ulcerans_Agy99 SSFGYFFYTGLGTFA-------VALLRSRFRISQTLAISLIAIIGVGAPI
. .* . * :: *:* : :* : : *
Mb3018|M.bovis_AF2122/97 DNEGSRYDVLLMIAISVIAVLD--NGLEATAITEYAGPYWSGRALGIQNT
Rv2994|M.tuberculosis_H37Rv DNEGSRYDVLLMIAISVIAVLD--NGLEATAITEYAGPYWSGRALGIQNT
MMAR_1717|M.marinum_M DDEGSRYDVLLMITITVIAVLD--NGLQATAITEYAGPYWSGRALGVQNT
MAV_3846|M.avium_104 DYLNSRWQAGLMVAISVIAVLD--NGLEATAITEFAGPYWSGRALGIQNT
Mflv_4231|M.gilvum_PYR-GCK DLVNSPLSIALMMVASVITVSD--NGLAFTLIAEYAGPFWSGRALGTQNT
Mvan_2131|M.vanbaalenii_PYR-1 DWLDSPVSIVVMIAASVITVSD--NGLAFTLIAEYAGPFWSGRALGTQNT
MSMEG_2380|M.smegmatis_MC2_155 DWLSSPVSIALMVAASVITVSD--NGLAFTGIAEIAGPFWSGRALGTQNT
TH_2039|M.thermoresistible__bu DALDSPVSVAFMVIAAVVTVSD--NSLAFTAIAEIAGPYWTGRALGTQNT
MAB_3302|M.abscessus_ATCC_1997 NQLDWSVSVVVMLVASVITVSD--NGLAYTSIAEIAGPFWSGRALGAQNT
MUL_3155|M.ulcerans_Agy99 GTLCAGRLADWLIGRGYLGARLGVAGAAFLVAGGFFVPALLTDNVVIAVV
. :: : . . * : .
Mb3018|M.bovis_AF2122/97 TQRLMAA----AGPPLFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLP
Rv2994|M.tuberculosis_H37Rv TQRLMAA----AGPPLFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLP
MMAR_1717|M.marinum_M TQRLMAA----AGPPIFGALITTAAYPLAWGLCGLFPLAAIPLVPTRLRP
MAV_3846|M.avium_104 TQRMMAA----AGPPLFGALISAAKYPPAWLLCALFPLAAMPLVPTRLLP
Mflv_4231|M.gilvum_PYR-GCK SQLFAQG----VAPPLFGGLIAVAGYPVAFAVCALLPVLAIPAVPLKVTV
Mvan_2131|M.vanbaalenii_PYR-1 SQLFAQG----VAPPLFGGLIAIAGYPVAFAVCALFPLLAIPSVPLTVKP
MSMEG_2380|M.smegmatis_MC2_155 SQHLATA----VSSPVFGGLIGVAGYPVAFAVCALLPALAIPLVPVEPAR
TH_2039|M.thermoresistible__bu SQLLTTA----ITPPLFGGLIGVAGYPVAFALCAVLPLAAVPLVPADPAT
MAB_3302|M.abscessus_ATCC_1997 GQLLAAA----VAPPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLER
MUL_3155|M.ulcerans_Agy99 AAFLAAIGLGGVNPPLDAARLDIMHSRLWGRAEAIRTTLRSGFTAAAPLV
: .*: .. .: . ..
Mb3018|M.bovis_AF2122/97 PGLETRARRQSVRRHRWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAIT
Rv2994|M.tuberculosis_H37Rv PGLETRARRQSVRRHRWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAIT
MMAR_1717|M.marinum_M PGLEPRERPQSARRLRRWQAVRSRELPSNPRPPDPPG-------------
MAV_3846|M.avium_104 PGLETRARRQSVRRLRWWRAVRSHALPDIVRRPGQPG-------------
Mflv_4231|M.gilvum_PYR-GCK DR------------------------------------------------
Mvan_2131|M.vanbaalenii_PYR-1 DR------------------------------------------------
MSMEG_2380|M.smegmatis_MC2_155 ES------------------------------------------------
TH_2039|M.thermoresistible__bu PQIRPSSPESPRRVR-----------------------------------
MAB_3302|M.abscessus_ATCC_1997 PAP-----------------------------------------------
MUL_3155|M.ulcerans_Agy99 FAWYPCSWRRSGARPVGWQPHRPG--------------------------
Mb3018|M.bovis_AF2122/97 PPT
Rv2994|M.tuberculosis_H37Rv PPT
MMAR_1717|M.marinum_M ---
MAV_3846|M.avium_104 ---
Mflv_4231|M.gilvum_PYR-GCK ---
Mvan_2131|M.vanbaalenii_PYR-1 ---
MSMEG_2380|M.smegmatis_MC2_155 ---
TH_2039|M.thermoresistible__bu ---
MAB_3302|M.abscessus_ATCC_1997 ---
MUL_3155|M.ulcerans_Agy99 ---