For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSRDPTGVGARWAIMIVSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMFAWGY LLDHVGERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAGGCNSAGGRLVSGWFPPQQRGLAMG IRQTAQPLGIASGALVIPELAERGVHAGLMFPAVVCTLAAVASVLGIVDPPRKSRTKASEQELASPYRGS SILWRIHAASALLMMPQTVTVTFMLVWLINHHGWSVAQAGVLVTISQLLGALGRVAVGRWSDHVGSRMRP VRLIAAAAAATLFLLAAVDNEGSRYDVLLMIAISVIAVLDNGLEATAITEYAGPYWSGRALGIQNTTQRL MAAAGPPLFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRARRQSVRRHRWWQAVRCHAWPN GPRRPGPPGQPRRVRQGGTAITPPT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2994 | - | - | 100% (445) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
M. tuberculosis H37Rv | Rv1737c | narK2 | 3e-05 | 22.86% (280) | nitrate/nitrite transporter NarK2 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3018 | - | 0.0 | 100.00% (445) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_4231 | - | 1e-123 | 54.41% (397) | major facilitator transporter |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3302 | - | 1e-127 | 56.78% (391) | major facilitator transporter |
M. marinum M | MMAR_1717 | - | 0.0 | 80.57% (422) | integral membrane transport protein |
M. avium 104 | MAV_3846 | - | 0.0 | 74.88% (434) | sugar transporter family protein |
M. smegmatis MC2 155 | MSMEG_2380 | - | 1e-129 | 58.87% (389) | sugar transporter family protein |
M. thermoresistible (build 8) | TH_2039 | - | 1e-128 | 54.69% (426) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2131 | - | 1e-125 | 56.78% (391) | major facilitator superfamily transporter |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4231|M.gilvum_PYR-GCK ----------------------------------MAPSSIGPTRRWLMLA Mvan_2131|M.vanbaalenii_PYR-1 --------------MSHIMRIWFSIVRRLCNHGAMPATAISSMRRWSMLA MSMEG_2380|M.smegmatis_MC2_155 ------------------MELRFDILRSRDSMERMAAPVIGTLRRWSMLV TH_2039|M.thermoresistible__bu ----------------------------------MPVSSISPARRWSMLV MAB_3302|M.abscessus_ATCC_1997 ------------------------------MVTMVHVDEVGTARRWAMLA Rv2994|M.tuberculosis_H37Rv -----------------------------MSRDPTG-----VGARWAIMI Mb3018|M.bovis_AF2122/97 -----------------------------MSRDPTG-----VGARWAIMI MMAR_1717|M.marinum_M -----------------------------MPDESSATQELSLSARWWIVI MAV_3846|M.avium_104 MAGRRPQAPMTGNGTRPTPKYPGGMQAWGMQTDPVATPDVGAGTRWSIMV ** :: Mflv_4231|M.gilvum_PYR-GCK IGLLTTLCANVFINGVAFLIPTLHDERGLDLAGAALMSSLPSLGMVVTLI Mvan_2131|M.vanbaalenii_PYR-1 IGLLATLCANVFINGVAFLIPTLHDERGLDLAAAGLMSSLPSLGMVVTLI MSMEG_2380|M.smegmatis_MC2_155 IALTSTMCANVFINGAAFLIPTLHAERGLDLARSGLLSSMPSFGMVTTLI TH_2039|M.thermoresistible__bu IALAATLFSVVFINGVAFVIPTLHREHGLSLAQAGLLSALPSFGMVATLI MAB_3302|M.abscessus_ATCC_1997 IALGSTAGANVFINGVAFLIPALHAERGLDLANAGLLSAMPSFGMVLTLI Rv2994|M.tuberculosis_H37Rv VSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMF Mb3018|M.bovis_AF2122/97 VSLGVTASSFLFINGVAFLIPRLENARGTPLSHAGLLASMPSWGLVVTMF MMAR_1717|M.marinum_M VSLIVTASSFLFINGVAFLIPRLENARDTPLAEAGLLASMPSWGMVVTLV MAV_3846|M.avium_104 VSLLATASSFLFINGVAFLIPSLQGARGIRLDEAGLLASMPSWGMVVTLV :.* * : :****.**:** *. :. * :.*::::** *:* *:. Mflv_4231|M.gilvum_PYR-GCK AWGYVVDRIGERAVLTAGSALTAAASFAAASMDTLLTTGIFLFLGGMAAA Mvan_2131|M.vanbaalenii_PYR-1 AWGYVVDRVGERVVLTLGSALTAAAAFAAAAADTLLTTGVFLFLGGMAAA MSMEG_2380|M.smegmatis_MC2_155 AWGYVVDRFGERLVLGLGSALTAAAALAAASVQSLFAVGLFLLLGGMAAA TH_2039|M.thermoresistible__bu AWGYLVDRIGERIVLTVGSALTAASAFAAAAVDSLLLVGVFLLLGGMAAA MAB_3302|M.abscessus_ATCC_1997 AWGALIDKFGERIALVSGLALTAVAAFAAAESPSLTVTGAFLLLGGAAAA Rv2994|M.tuberculosis_H37Rv AWGYLLDHVGERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAG Mb3018|M.bovis_AF2122/97 AWGYLLDHVGERMVMAVGSALTAAAAYAAASVHSLLWIGVFLFLGGMAAG MMAR_1717|M.marinum_M AWGYVLDHVGEQIVMTVGSALTAIAAYAAASVDSLLLMGIYLFLGGMAAA MAV_3846|M.avium_104 AWGYVLDRVGERVVMTTGSALTALAAYAASSAHSMVLIAVYLFLGGMAAA *** ::*:.**: .: * **** :: **: :: . :*:*** **. Mflv_4231|M.gilvum_PYR-GCK SSNTASARLVVGWFDAERRGLVMGIRQTAQPLGVGVGALVIPRLAESHGL Mvan_2131|M.vanbaalenii_PYR-1 SSNTASGRLVVGWFDAERRGLVMGIRQTAQPLGVGVGALVIPRLAQAEGV MSMEG_2380|M.smegmatis_MC2_155 SSNSASGRLVVGWFPPEQRGLVMGIRQTATPLGVGLGALVIPRLAESHGV TH_2039|M.thermoresistible__bu SSNTASARVVVGWFPPHQRGLVMGIRQTAQPLGVALGALVIPRLAQSHGI MAB_3302|M.abscessus_ATCC_1997 ACNSASGRVVVGWFPPHQRGTVMGIRQMAQPLGVAAGALVIPRIAEGHGV Rv2994|M.tuberculosis_H37Rv GCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELAE-RGV Mb3018|M.bovis_AF2122/97 GCNSAGGRLVSGWFPPQQRGLAMGIRQTAQPLGIASGALVIPELAE-RGV MMAR_1717|M.marinum_M SCNSAGGRLVSGWFPPHQRGLAMGIRQTAQPLGIALGALVIPELAE-HSI MAV_3846|M.avium_104 SCNTAGGRLVSAWFPPHQRGLAMGIRQTAQPLGIALGAMVIPELAE-HGP ..*:*..*:* .** ..:** .***** * ***:. **:***.:*: .. Mflv_4231|M.gilvum_PYR-GCK SAALLFPAVVCAVSAVLCLAAVIDPPRPARADAARTDLANPYRNSAMLWR Mvan_2131|M.vanbaalenii_PYR-1 SAALLFPAIVCAAAAVLCAIAVVDPPRPARAEADDTDLANPYRGSPMLWR MSMEG_2380|M.smegmatis_MC2_155 SAALLFPAVVCGIAAVVSAVFVLDPPRPPRAEAPAEHLANPYRGSSVLWR TH_2039|M.thermoresistible__bu SAALLFPAAVCAVAAVICLIGVLDPPRPPRASADGRHPQNPYRGSGLLWR MAB_3302|M.abscessus_ATCC_1997 ATALLFPAIVCAVSSAVCLVGIIDPPRPPRSEAPEEHLANPYRGSRVLWL Rv2994|M.tuberculosis_H37Rv HAGLMFPAVVCTLAAVASVLGIVDPPRKSRTKASEQELASPYRGSSILWR Mb3018|M.bovis_AF2122/97 HAGLMFPAVVCTLAAVASVLGIVDPPRKSRTKASEQELASPYRGSSILWR MMAR_1717|M.marinum_M HNALMFPAAFCTIAAVASLVGVVDPPRKSRKVASKEELASPYRGSAVLWR MAV_3846|M.avium_104 QAGLRFTALACVFGAVASVIGIVDPPRKPRASASDQELASPYRGSLTLWR .* *.* * .:. . ::**** .* * . .***.* ** Mflv_4231|M.gilvum_PYR-GCK IHLTSVLLVIPQVVVWTFTLVWMISEHGWSPESAGVLVMVAQIMGAAGRI Mvan_2131|M.vanbaalenii_PYR-1 IHLTSVLLVVPQVMVWTFTLVWLISEHRWSPESAGLLVMTAQILGAAGRI MSMEG_2380|M.smegmatis_MC2_155 IHAVSVLLVVPQGVLWTFALVWLITDRGWSAASAGILVTVTQLLGAGGRI TH_2039|M.thermoresistible__bu IHAVSVLLVVPQGVIWTFTLVWLMTERSWSAGSAGTMVMIAQVLGAGGRV MAB_3302|M.abscessus_ATCC_1997 IHGVSVLLVVPQVVVWTFTLVWLVTDRGWSIGAASVMVTVAQLVGALGRV Rv2994|M.tuberculosis_H37Rv IHAASALLMMPQTVTVTFMLVWLINHHGWSVAQAGVLVTISQLLGALGRV Mb3018|M.bovis_AF2122/97 IHAASALLMMPQTVTVTFMLVWLINHHGWSVAQAGVLVTISQLLGALGRV MMAR_1717|M.marinum_M IHASSALLMMPQTVTVTFMLVWLMNHHGWPVATAGILVTVSQLLGALGRI MAV_3846|M.avium_104 IHAVAGLMMMPQTVTVTFMLVWLIRNLHWSVAAAGALVTLSQLLGALGRV ** : *:::** : ** ***:: . *. *. :* :*::** **: Mflv_4231|M.gilvum_PYR-GCK GAGRWSDHYVRRSGDLLASRLRPIRIIAAAAAASMALLALTDLVNSPLSI Mvan_2131|M.vanbaalenii_PYR-1 GAGRWSDTFVRRSGDVIASRLRPIRMIAAAAAAAMALLAVTDWLDSPVSI MSMEG_2380|M.smegmatis_MC2_155 AAGKWS--------DVIGYRLRPIRTIALAAAVTMAALALTDWLSSPVSI TH_2039|M.thermoresistible__bu AAGRWS--------DLVGSRLRPIRTIALAAAAAMALLALTDALDSPVSV MAB_3302|M.abscessus_ATCC_1997 AAGMWS--------DRWGSRMRPIRAIAAAASATMALLAVTNQLDWSVSV Rv2994|M.tuberculosis_H37Rv AVGRWS--------DHVGSRMRPVRLIAAAAAATLFLLAAVDNEGSRYDV Mb3018|M.bovis_AF2122/97 AVGRWS--------DHVGSRMRPVRLIAAAAAATLFLLAAVDNEGSRYDV MMAR_1717|M.marinum_M AVGRWS--------DRVGSRMRPVRVIAIASAAALFLLALVDDEGSRYDV MAV_3846|M.avium_104 AVGRWS--------DRLGSRMRPVRYIAAAAVLVLLLLAWADYLNSRWQA ..* ** * . *:**:* ** *: : ** .: . . Mflv_4231|M.gilvum_PYR-GCK ALMMVASVITVSDNGLAFTLIAEYAGPFWSGRALGTQNTSQLFAQGVAPP Mvan_2131|M.vanbaalenii_PYR-1 VVMIAASVITVSDNGLAFTLIAEYAGPFWSGRALGTQNTSQLFAQGVAPP MSMEG_2380|M.smegmatis_MC2_155 ALMVAASVITVSDNGLAFTGIAEIAGPFWSGRALGTQNTSQHLATAVSSP TH_2039|M.thermoresistible__bu AFMVIAAVVTVSDNSLAFTAIAEIAGPYWTGRALGTQNTSQLLTTAITPP MAB_3302|M.abscessus_ATCC_1997 VVMLVASVITVSDNGLAYTSIAEIAGPFWSGRALGAQNTGQLLAAAVAPP Rv2994|M.tuberculosis_H37Rv LLMIAISVIAVLDNGLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPP Mb3018|M.bovis_AF2122/97 LLMIAISVIAVLDNGLEATAITEYAGPYWSGRALGIQNTTQRLMAAAGPP MMAR_1717|M.marinum_M LLMITITVIAVLDNGLQATAITEYAGPYWSGRALGVQNTTQRLMAAAGPP MAV_3846|M.avium_104 GLMVAISVIAVLDNGLEATAITEFAGPYWSGRALGIQNTTQRMMAAAGPP .*: :*::* **.* * *:* ***:*:***** *** * : . .* Mflv_4231|M.gilvum_PYR-GCK LFGGLIAVAGYPVAFAVCALLPVLAIPAVPLKVTVDR------------- Mvan_2131|M.vanbaalenii_PYR-1 LFGGLIAIAGYPVAFAVCALFPLLAIPSVPLTVKPDR------------- MSMEG_2380|M.smegmatis_MC2_155 VFGGLIGVAGYPVAFAVCALLPALAIPLVPVEPARES------------- TH_2039|M.thermoresistible__bu LFGGLIGVAGYPVAFALCAVLPLAAVPLVPADPATPQIRPSSPESPRRVR MAB_3302|M.abscessus_ATCC_1997 IFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP------------ Rv2994|M.tuberculosis_H37Rv LFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRARRQSVRRH Mb3018|M.bovis_AF2122/97 LFGSLITTAAYPTAWALCGVFPLAAVPLVPVRLLPPGLETRARRQSVRRH MMAR_1717|M.marinum_M IFGALITTAAYPLAWGLCGLFPLAAIPLVPTRLRPPGLEPRERPQSARRL MAV_3846|M.avium_104 LFGALISAAKYPPAWLLCALFPLAAMPLVPTRLLPPGLETRARRQSVRRL :**.: * :. *: :*.::* *: ** Mflv_4231|M.gilvum_PYR-GCK -------------------------------------- Mvan_2131|M.vanbaalenii_PYR-1 -------------------------------------- MSMEG_2380|M.smegmatis_MC2_155 -------------------------------------- TH_2039|M.thermoresistible__bu -------------------------------------- MAB_3302|M.abscessus_ATCC_1997 -------------------------------------- Rv2994|M.tuberculosis_H37Rv RWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAITPPT Mb3018|M.bovis_AF2122/97 RWWQAVRCHAWPNGPRRPGPPGQPRRVRQGGTAITPPT MMAR_1717|M.marinum_M RRWQAVRSRELPSNPRPPDPPG---------------- MAV_3846|M.avium_104 RWWRAVRSHALPDIVRRPGQPG----------------