For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0644 | narK2 | - | 100% (300) | POSSIBLE NITRATE/NITRITE TRANSPORTER NARK2 |
| M. thermoresistible (build 8) | TH_2039 | - | 2e-10 | 30.52% (154) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
| M. thermoresistible (build 8) | TH_0390 | - | 2e-05 | 27.68% (177) | major facilitator superfamily protein permease |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1766c | narK2 | 3e-92 | 68.70% (246) | nitrate/nitrite transporter NarK2 |
| M. gilvum PYR-GCK | Mflv_2155 | - | 2e-97 | 82.30% (209) | major facilitator transporter |
| M. tuberculosis H37Rv | Rv1737c | narK2 | 3e-92 | 68.70% (246) | nitrate/nitrite transporter NarK2 |
| M. leprae Br4923 | MLBr_00844 | narK | 4e-10 | 25.38% (197) | putative nitrite extrusion protein |
| M. abscessus ATCC 19977 | MAB_3302 | - | 2e-10 | 31.82% (154) | major facilitator transporter |
| M. marinum M | MMAR_4265 | narK3_4 | 2e-10 | 26.18% (191) | integral membrane nitrite extrusion protein NarK3_4 |
| M. avium 104 | MAV_2079 | - | 4e-10 | 27.23% (191) | transporter, major facilitator family protein |
| M. smegmatis MC2 155 | MSMEG_5141 | - | 3e-98 | 82.30% (209) | nitrate/nitrite transporter protein |
| M. ulcerans Agy99 | MUL_3265 | narK3 | 2e-08 | 26.56% (192) | integral membrane nitrite extrusion protein NarK3 |
| M. vanbaalenii PYR-1 | Mvan_4547 | - | 7e-99 | 83.73% (209) | major facilitator superfamily transporter |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4265|M.marinum_M ---------------------------------------MAPTHRIADWD
MAV_2079|M.avium_104 ---------------------------------------MARTRRIAHWD
MUL_3265|M.ulcerans_Agy99 ---------------------------------------MGRSRHIAHWD
MLBr_00844|M.leprae_Br4923 MDQLVLLQAEESLYGPGRRSKTVPIDHRHSLKSSFFRLRLRRACRISHWD
Mflv_2155|M.gilvum_PYR-GCK ----------------------------------------MEVVGQTCLS
Mvan_4547|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_5141|M.smegmatis_MC2_155 --------------------------------------------------
Mb1766c|M.bovis_AF2122/97 --------------------------------------------------
Rv1737c|M.tuberculosis_H37Rv --------------------------------------------------
TH_0644|M.thermoresistible__bu --------------------------------------------------
MAB_3302|M.abscessus_ATCC_1997 --------------------------------------------------
MMAR_4265|M.marinum_M PEDVSAWNAGNSVIARRNLIWANVTAHVGFSIWYLWSVMMLFMPQSVYGF
MAV_2079|M.avium_104 PEDLVAWEAGNKLIARRNLIWSIATMHVAFSIWYLWSVMVLFMPQARYGF
MUL_3265|M.ulcerans_Agy99 PEDVQAWEAGNKAIARRNLVFSIATMHVGFSIWTLWSVMVLFMPQSVYGI
MLBr_00844|M.leprae_Br4923 PEDQAAWEAGNKTIARLNLLWSVLTVHLGYSVWTLWPVMELFMPKDVYGF
Mflv_2155|M.gilvum_PYR-GCK GRVSTATTPDIGARRGLNLALATWVSAINFWAWNMIGPLSTTYAGDMS-L
Mvan_4547|M.vanbaalenii_PYR-1 ------------------MALATWVSAINFWAWNMIGPLSTTYAGDMS-L
MSMEG_5141|M.smegmatis_MC2_155 --MSTATTPYT--RQGVNLALATWVSAINFWAWNMIGPLSTTYAGDMR-L
Mb1766c|M.bovis_AF2122/97 -----------MRGQAANLVLATWISVVNFWAWNLIGPLSTSYARDMS-L
Rv1737c|M.tuberculosis_H37Rv -----------MRGQAANLVLATWISVVNFWAWNLIGPLSTSYARDMS-L
TH_0644|M.thermoresistible__bu ----------------------------------MIGPLSTTYAVDIS-L
MAB_3302|M.abscessus_ATCC_1997 -MVTMVHVDEVGTARRWAMLAIALGSTAGANVFINGVAFLIPALHAERGL
: :
MMAR_4265|M.marinum_M STGDKLLLGATATLVGALVRIPYAMATTRFGGRSWAVFSSAVLFIPTIGA
MAV_2079|M.avium_104 TTGDKLLVGATAALVGALVRIPYAMGTARLGGRNWAVLSSLVLLIPTLAA
MUL_3265|M.ulcerans_Agy99 SAANKLLLGATATLVGGCVRIPYVMATARFGGRNWATFSSLVLLVPTVGA
MLBr_00844|M.leprae_Br4923 SAGDKFLLATTATLVGACLRVPYSLATALFGGRNWAIFSVMVLLIPTIAT
Mflv_2155|M.gilvum_PYR-GCK SSSQASVLVATPILVGALGRIVVGPLTDRFGGRVMFIGVTVASIVPVLAV
Mvan_4547|M.vanbaalenii_PYR-1 SSSEASILVATPILVGALGRIVVGPLTDRYGGRVMFMAVTLASIVPVLAV
MSMEG_5141|M.smegmatis_MC2_155 SSTEASMLVATPILVGSLGRIVIGSLTDRFGGRTMFIAVTVASILPVLAV
Mb1766c|M.bovis_AF2122/97 SSAEASLLVATPILVGALGRIVTGPLTDRFGGRAMLIAVTLASILPVLAV
Rv1737c|M.tuberculosis_H37Rv SSAEASLLVATPILVGALGRIVTGPLTDRFGGRAMLIAVTLASILPVLAV
TH_0644|M.thermoresistible__bu SSAEASMLVATPILVGAVGRIVVGSLTDRYGGRAMFIAITLASIVPVLAV
MAB_3302|M.abscessus_ATCC_1997 DLANAGLLSAMPSFGMVLTLIAWGALIDKFGER---IALVSGLALTAVAA
: :: : . : : * * :..:..
MMAR_4265|M.marinum_M VVLLANPGLPLWPYLVCAALTGLGGGNYAASLSHAEAFYPQRLKGFALGL
MAV_2079|M.avium_104 IVLLAHPGLPLWPYLVCAALTGLGGGNYAAALANVESFFPQRRKGFALGL
MUL_3265|M.ulcerans_Agy99 IVLLANPGLPLWPYLVCAALSGVGGGNYSASLANVEAFYPQRLKGVALGL
MLBr_00844|M.leprae_Br4923 MVLLAHPGLPLWPYLACAALTGLGGGNFAASMTNANAFYPHRLKGAAFGL
Mflv_2155|M.gilvum_PYR-GCK GVAGTQGSYPLL--VVFGLFLGIAGTVFAVGIPFANHWYDASRRGFATGV
Mvan_4547|M.vanbaalenii_PYR-1 GIAGSSGSYPLL--VVFGFFLGVAGTVFAVGIPFANHWYEASRRGFATGV
MSMEG_5141|M.smegmatis_MC2_155 GAAGSAGSYPLL--LVCGFFLGVAGTIFAVGIPFSNNWYDVSRRGFATGV
Mb1766c|M.bovis_AF2122/97 GVAATMGSYALL--VFFGLFLGVAGTIFAVGIPFANNWYQPARRGFSTGV
Rv1737c|M.tuberculosis_H37Rv GVAATMGSYALL--VFFGLFLGVAGTIFAVGIPFANNWYQPARRGFSTGV
TH_0644|M.thermoresistible__bu GAAGAAGSYPLL--LVFGFFLGIAGTIFAVGIPFANNWYAPSRRGFATGV
MAB_3302|M.abscessus_ATCC_1997 FAAAESPSLTVTG-AFLLLGGAAAAACNSASGRVVVGWFPPHQRGTVMGI
. .: . .. :.. :: :* *:
MMAR_4265|M.marinum_M TGGLSNLGSAAIQAVGLVVLATAGHEAPYLVCAVYLVLLAIAGLGAALFM
MAV_2079|M.avium_104 TGGVGNLGAAGIQAVGLVVLATAGNQAPYWVCAVYLVLLALVGAGAALFM
MUL_3265|M.ulcerans_Agy99 TGGIGNLGVTAIQAVGLLVLATAGHEAPYWVCAVYLVLIAIAGLGAALFM
MLBr_00844|M.leprae_Br4923 AGGAGNLGVSVIQVVGMLVIASVGDRKPYIVCGLYVVLLIIAGIGAMLFM
Mflv_2155|M.gilvum_PYR-GCK FG----MGMVGTAMSAFFTPRFVNWFGLFTTHVIIAVALALTAVLCLVVM
Mvan_4547|M.vanbaalenii_PYR-1 FG----MGMVGTALSAFFTPRFVKWFGLFTTHVIIAAALAVTAALCLFIM
MSMEG_5141|M.smegmatis_MC2_155 FG----MGMVGTALSAFFTPRFVNWFGLFTTHLIVAIALALTAVLCVVMM
Mb1766c|M.bovis_AF2122/97 FG----MGMVGTALSAFFTPRFVRWFGLFTTHAIVAAALASTAVVAMVVL
Rv1737c|M.tuberculosis_H37Rv FG----MGMVGTALSAFFTPRFVRWFGLFTTHAIVAAALASTAVVAMVVL
TH_0644|M.thermoresistible__bu FG----MGMVGTALSAFFTPRFVESFGLFTTHVIIAVALGLTALLCLVAM
MAB_3302|M.abscessus_ATCC_1997 RQ---MAQPLGVAAGALVIPRIAEGHGVATALLFPAIVCAVSSAVCLVGI
.:. . . . . . . :
MMAR_4265|M.marinum_M DNLTHV-IEVAHVRSVLKVP----DSWGIA-LLYLCCSGSFLGFAFAFGQ
MAV_2079|M.avium_104 DNLDHS-VEVGHVRSVLTVP----DTWTIS-FLYMCASGSFIGFAFAFGQ
MUL_3265|M.ulcerans_Agy99 ENLTHV-IEVGHVRSVLAVP----DTWSVS-FLYMCASGSFIGFAFVFGQ
MLBr_00844|M.leprae_Br4923 NDIEHHRIGVNTIRPVLFVVVSTRDSWVLA-LLYLASFGSFIGFSFAFGQ
Mflv_2155|M.gilvum_PYR-GCK RDSPQFTPNHDAVMPKLRAAAKLPVTWEMS-FLYAVVFGGFVAFSNYLPT
Mvan_4547|M.vanbaalenii_PYR-1 RDSPNFTPNHDAVVPKLKAAARLPVTWEMS-FLYAVVFGGFVAFSNYLPT
MSMEG_5141|M.smegmatis_MC2_155 RDAPSFRPNTDPVVPKLKAAAKLPVTWEMS-FLYAVVFGGFVAFSNYLPT
Mb1766c|M.bovis_AF2122/97 RDAPYFRPNADPVLPRLKAAARLPVTWEMS-FLYAIVFGGFVAFSNYLPT
Rv1737c|M.tuberculosis_H37Rv RDAPYFRPNADPVLPRLKAAARLPVTWEMS-FLYAIVFGGFVAFSNYLPT
TH_0644|M.thermoresistible__bu HDSPDFTPNTERVLPKLKAAARLPVTWEMS-ILYAIVFGGFVAFSNYLPT
MAB_3302|M.abscessus_ATCC_1997 IDPPRPPRSEAPEEHLANPYRGSRVLWLIHGVSVLLVVPQVVVWTFTLVW
: * : . .: :: :
MMAR_4265|M.marinum_M VLQHN--FAAAGESHAQASLHAAEIAFIGPLLGSLSRIFGGRLGDRVGGG
MAV_2079|M.avium_104 VIAHN--LIAGGQTHGQAALHAAEIAFAGPLLGSMARVVGGKLGDRFDGG
MUL_3265|M.ulcerans_Agy99 VLQFN--LLAGGQSTAQASLHAAEIAFVGPLLGSLARIVGGKLGDRFGGG
MLBr_00844|M.leprae_Br4923 VLETN--FVAGGQSTAQAALHAAELAFIGPTLAAVARFWGGRLADRLGGS
Mflv_2155|M.gilvum_PYR-GCK YIK-----TIYDFSAVDAGARTAAFALA----AVLARPVGGMLADRIPPK
Mvan_4547|M.vanbaalenii_PYR-1 YIK-----TIYGFSAVDAGARTAGFALA----AVLARPVGGALADRFAPK
MSMEG_5141|M.smegmatis_MC2_155 YIK-----TIYDFSAVEAGSRTAGFAVA----AVLARPVGGALSDRIPPK
Mb1766c|M.bovis_AF2122/97 YIT-----TIYGFSTVDAGARTAGFALA----AVLARPVGGWLSDRIAPR
Rv1737c|M.tuberculosis_H37Rv YIT-----TIYGFSTVDAGARTAGFALA----AVLARPVGGWLSDRIAPR
TH_0644|M.thermoresistible__bu YXPSSPACTITTCTSTPPPRHSTRFGSG----PGRSGPAG-SWPMCSPPR
MAB_3302|M.abscessus_ATCC_1997 LVTDR------GWSIGAASVMVTVAQLVG----ALGRVAAGMWSDRWGSR
: . : . .
MMAR_4265|M.marinum_M RVTFAALAAMIVAGGFLVAVSTHDDLTRGPNGQVTGTTMIGYICGFIALF
MAV_2079|M.avium_104 RVTLTVLAAMIVAGGFLVAVSTHDDLTRPSGAPVSLYTTAGYIAGFIALF
MUL_3265|M.ulcerans_Agy99 RVTLGVFVAMILSAALLVAVNTHADLNHGAGGRMTAATLIGYVSGFIALF
MLBr_00844|M.leprae_Br4923 RVTLVVFGAMVFAAGLLGVLGIIEGSR---VCPIRGVMMASYFAGFITLF
Mflv_2155|M.gilvum_PYR-GCK YVVLGSFAGTAAAAFVAIFQPPP---------------DLWSAVTFITLA
Mvan_4547|M.vanbaalenii_PYR-1 YVVLASFAGTAAMAFVAIFQPPP---------------DIWSAATFITLA
MSMEG_5141|M.smegmatis_MC2_155 YVVLASFAGTALLAFVAVFQPPP---------------DVWSATTFITLA
Mb1766c|M.bovis_AF2122/97 HVVLASLAGTALLAFAAALQPPP---------------EVWSAATFITLA
Rv1737c|M.tuberculosis_H37Rv HVVLASLAGTALLAFAAALQPPP---------------EVWSAATFITLA
TH_0644|M.thermoresistible__bu NPVTTAGSG-------------------------------RSAITRRSRG
MAB_3302|M.abscessus_ATCC_1997 MRPIRAIAAAASATMALLAVTNQ---------------LDWSVSVVVMLV
.
MMAR_4265|M.marinum_M IFCGVGKGSVFKLIPSVFRERSRSLNLDGAQRRHWERVMSGALIGFAGSL
MAV_2079|M.avium_104 ICCGVGKGSVFKLIPSVFAQRSRALELGDTERRHWERARSAALIGFAGSF
MUL_3265|M.ulcerans_Agy99 IFCGMGKGTVFELIPSIFAERSQHLDISDMQRRQWARIVSGALIGFAGSV
MLBr_00844|M.leprae_Br4923 ILSGLGNGSVYKMIPTIFEACSHSLGINDDECRDWSRVISGVVIGFVAEV
Mflv_2155|M.gilvum_PYR-GCK LFLGIGTGGVFAWVARRAPASS-----------------VGSVTGIVAAA
Mvan_4547|M.vanbaalenii_PYR-1 LFLGIGTGGVFAWVARRAPAKS-----------------VGSVTGIVAAA
MSMEG_5141|M.smegmatis_MC2_155 IFLGVGTGGVFAWVARRSPAQS-----------------VGSVTGIVAAA
Mb1766c|M.bovis_AF2122/97 VCLGVGTGGVFAWVARRAPAAS-----------------VGSVTGIVAAA
Rv1737c|M.tuberculosis_H37Rv VCLGVGTGGVFAWVARRAPAAS-----------------VGSVTGIVAAA
TH_0644|M.thermoresistible__bu HWIGVRS-------TRSHPMCR-----------------CGCST--AAAC
MAB_3302|M.abscessus_ATCC_1997 ASVITVSDNGLAYTSIAEIAGP---------------FWSGRALGAQNTG
. . .
MMAR_4265|M.marinum_M GALGAMAINLVLRQSYVSTGTETPAFWIFLLCYIAAAALTWVRYAR-PRG
MAV_2079|M.avium_104 GALGGVVINLALRQSYASTGSSTPAFGAFMLCYVAAAALTWARYVR-PRR
MUL_3265|M.ulcerans_Agy99 GALGGVGINLALRQSYVHSGTETPAFWAFLVCYLCAAALTWARYVR-PRS
MLBr_00844|M.leprae_Br4923 GALGGVGIDLALRESYLNTGGVTAAFWIFMLCYAAAGVLTWKMYVCRPLP
Mflv_2155|M.gilvum_PYR-GCK GGLGGYFPPLVMGGTYDSVDNDYTIGLSLLVATALIALLYTALRLHAHEP
Mvan_4547|M.vanbaalenii_PYR-1 GGLGGYFPPLVMGASYDSIENDYTIGLTLLVATALLAFLYTALRLHAREP
MSMEG_5141|M.smegmatis_MC2_155 GGLGGYFPPLVMGATYDADDNDYTVGLLLLVATALVAFAYTALRLHAHEP
Mb1766c|M.bovis_AF2122/97 GGLGGYFPPLVMGATYDPVDNDYTVGLLLLVATALVACTYTAL--HAREP
Rv1737c|M.tuberculosis_H37Rv GGLGGYFPPLVMGATYDPVDNDYTVGLLLLVATALVACTYTAL--HAREP
TH_0644|M.thermoresistible__bu CGR-----------------------------------------------
MAB_3302|M.abscessus_ATCC_1997 QLLAAAVAPPIFGAIAAAAGFSAAFAVCALFPLAAVGLVPVKLERPAP--
MMAR_4265|M.marinum_M -VLLPAAAP-LPAAAEVPVT---
MAV_2079|M.avium_104 -APEPRTAPDWQPMAEQPVSS--
MUL_3265|M.ulcerans_Agy99 PVASAPRKPNEDPQLSGAAA---
MLBr_00844|M.leprae_Br4923 GNLHDEAANAFAASVGASRTHRG
Mflv_2155|M.gilvum_PYR-GCK -----KPTQEVR-----------
Mvan_4547|M.vanbaalenii_PYR-1 -----QQKEAAT-----------
MSMEG_5141|M.smegmatis_MC2_155 GRGGVRSDQIDR-----------
Mb1766c|M.bovis_AF2122/97 -----VSEEASR-----------
Rv1737c|M.tuberculosis_H37Rv -----VSEEASR-----------
TH_0644|M.thermoresistible__bu -----------------------
MAB_3302|M.abscessus_ATCC_1997 -----------------------