For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2026 | - | - | 100% (613) | transposase |
| M. thermoresistible (build 8) | TH_4559 | - | 0.0 | 84.82% (382) | PUTATIVE putative acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_3989 | - | e-102 | 53.24% (370) | PUTATIVE acyl-CoA dehydrogenase domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3590c | fadE30 | 4e-38 | 33.14% (347) | acyl-CoA dehydrogenase FADE30 |
| M. gilvum PYR-GCK | Mflv_5166 | - | 3e-97 | 50.79% (378) | Fis family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3560c | fadE30 | 4e-38 | 33.14% (347) | acyl-CoA dehydrogenase FADE30 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 6e-22 | 25.13% (374) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0597 | - | 2e-36 | 30.52% (344) | acyl-CoA dehydrogenase FadE |
| M. marinum M | MMAR_2619 | - | 1e-108 | 84.36% (211) | transposase for ISMyma06 |
| M. avium 104 | MAV_2554 | - | 1e-165 | 74.61% (382) | acyl-CoA dehydrogenase, central region |
| M. smegmatis MC2 155 | MSMEG_2879 | - | 1e-105 | 53.70% (378) | acyl-CoA dehydrogenase |
| M. ulcerans Agy99 | MUL_2757 | - | 1e-104 | 52.88% (382) | acyl-CoA dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_2876 | - | 1e-105 | 53.23% (372) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_2879|M.smegmatis_MC2_155 --MAIPRLVPALD-TEPADATALRAEVRAFLDEQRAAGTFTPAVDAWLCG
Mvan_2876|M.vanbaalenii_PYR-1 --MARTRLVPPAG-VDHADTARLRADVRAFLAEQLAAQTFVPSVDSWLCG
MUL_2757|M.ulcerans_Agy99 --MALPRLVPPAGALDSPRADVLRGEVRAFLAEQSAAGGFTPSVDAWLSA
Mflv_5166|M.gilvum_PYR-GCK --MNTSRLVPPVA-DDPHAMDGLRDEVRQFVAEQRDAGRIGRQVDSWLTG
MAV_2554|M.avium_104 --MVNSFDALSAR---EPELVKLRHAVRDFLESDRAEFGWQPGVDSWLAG
Mb3590c|M.bovis_AF2122/97 --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR
Rv3560c|M.tuberculosis_H37Rv --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR
MAB_0597|M.abscessus_ATCC_1997 MVESQVSPAPAGEPMSEMSDDQVRTEIREWLAENLVGEFAELKGLGGPGS
MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEH-NELRATIRALAEKEIAPHAADVD-------
TH_2026|M.thermoresistible__bu --------------------------------------------------
MMAR_2619|M.marinum_M -----------MSHANASLTPRGRLRLARCVVDDRWTYARAAERFQCSTA
MSMEG_2879|M.smegmatis_MC2_155 WDEKFTT------ALAARGWLGMTVPKEYGGQGRSFLHRFVVTEELLAAG
Mvan_2876|M.vanbaalenii_PYR-1 WDEAFTE------ALAARGYLGMTVPEEYGGHGRSHIERFVVTEELLAAG
MUL_2757|M.ulcerans_Agy99 WDEDFTA------ALADRGWLGMTVPVEYGGHGRTFLERFVVTEELLAVG
Mflv_5166|M.gilvum_PYR-GCK WDEDFSR------ALAARGWLGMTVPEEYGGHGRSFLERFVVTEELLAAG
MAV_2554|M.avium_104 WDEEFSG------RLGAAGFTGLTIPQRYGGHGLGHLHRYVVTEELIAAG
Mb3590c|M.bovis_AF2122/97 EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD
Rv3560c|M.tuberculosis_H37Rv EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD
MAB_0597|M.abscessus_ATCC_1997 EHEAFEERLAWNRHLAAAGWTCLGWPVEHGGRGATVSQRVIFYEEYARAE
MLBr_00737|M.leprae_Br4923 QRARFPEEALA--ALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVD
TH_2026|M.thermoresistible__bu --------------------------------------------------
MMAR_2619|M.marinum_M TAKKWADR----YRVGGPEAMVDRSSRPHRSPGRLPQRRERRIIKIRFTR
MSMEG_2879|M.smegmatis_MC2_155 VPVAAHWIADRQIVPSLLKYGTERQKQEFLPRIAAGQCFFGIGMSEPDSG
Mvan_2876|M.vanbaalenii_PYR-1 APVAAHWIADRQIVPALLKHGTDAQKREFLPKIAAGKCFFGIGMSEPDSG
MUL_2757|M.ulcerans_Agy99 APVAAHWIADRQIVPSLLKYGTELQKSHFLPRIVRGECFFGIGMSEPDSG
Mflv_5166|M.gilvum_PYR-GCK APVGAHWIADRQIVPSLLKYGTETQKRRYLPEIAAGRCYFGIGMSEPDSG
MAV_2554|M.avium_104 APVAAHWTADRQVAPALLTYGNEEQRERLLPKIVAGQLFSSIGMSEHGAG
Mb3590c|M.bovis_AF2122/97 APDKVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPGAG
Rv3560c|M.tuberculosis_H37Rv APDKVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPGAG
MAB_0597|M.abscessus_ATCC_1997 APHKVNHLGEELLGPTLIAYGTPEQQQRFLPAIRDVTELWCQGYSEPGAG
MLBr_00737|M.leprae_Br4923 ASASLIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAG
TH_2026|M.thermoresistible__bu --------------------------MPLLRHLDQNTGLPVRRPKPRRYE
MMAR_2619|M.marinum_M RWGPHRIAAHLRLARSTVEAVLRRYRMPLLRDLDQASGLPVRRPQPRRYE
* : .
MSMEG_2879|M.smegmatis_MC2_155 SDLASVRTRAVQVEGGWRLTGTKVWTSGAHRAHAFIVLARTAPVDPAHRH
Mvan_2876|M.vanbaalenii_PYR-1 SDLASVRTRATRTDGGWSLSGTKVWTSGAHRAHAFIVLARTAPADPAHRH
MUL_2757|M.ulcerans_Agy99 SDLASVRTRAVRGEGGWLLSGTKVWTSGAHRAHAFIVLARTAPVDPDHRH
Mflv_5166|M.gilvum_PYR-GCK SDLASVRTKASPVDGGWSVTGAKVWTSGAHRADAFICLARTEPVDPAHRH
MAV_2554|M.avium_104 SDLAAVQTKAVRADGGWLLSGSKVWTSGAHHAHQVVVLARTSPPDPEHRH
Mb3590c|M.bovis_AF2122/97 SDLASVATTAELDGDQWVINGQKVWTSLAHLSQWCFVLARTEKG--SQRH
Rv3560c|M.tuberculosis_H37Rv SDLASVATTAELDGDQWVINGQKVWTSLAHLSQWCFVLARTEKG--SQRH
MAB_0597|M.abscessus_ATCC_1997 SDLANVSTSAVLDGGDWVINGQKVWTSLALQSQWCFVVARTEPG--SSRH
MLBr_00737|M.leprae_Br4923 SDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDP---DKGA
TH_2026|M.thermoresistible__bu HPAPGDLVHVDVKKLGRIPDGGGHRKLGRQAGRRNRCGMGYTFLHHAVDD
MMAR_2619|M.marinum_M HPAPGDLVHLDVKKLGRIPDGGGHRKLGRHAGRRNRSGVGYAFVHHAVDD
. . * .
MSMEG_2879|M.smegmatis_MC2_155 AGLSQFIVRFDGPGVEVRPIISMNGG--HHFNEVILDDAFVPDDMVFGQI
Mvan_2876|M.vanbaalenii_PYR-1 DGLSQFIVRFDGPGVEVRPIVSMNGG--HHFNEVILDGAFVPEDMVFGEI
MUL_2757|M.ulcerans_Agy99 AGLSQFIVDLRGPGVQTRPIISMNGA--HHFNEVILDNAHVPDEMVFGAI
Mflv_5166|M.gilvum_PYR-GCK AGLSQFIVDLRSPGVDIRPIVSMDGR--HHFNEVLLDDVFVADDMVFGAI
MAV_2554|M.avium_104 AGFSQFLVPCDAEGVRIEPIILMSGA--HHFNEVLFEQVFVPDADVLGEV
Mb3590c|M.bovis_AF2122/97 AGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTDADLVVGAP
Rv3560c|M.tuberculosis_H37Rv AGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTDADLVVGAP
MAB_0597|M.abscessus_ATCC_1997 KGLSYLLVPLDQPGVEIRPIIQLTGT--SEFNEVFFDNARTSADLVVGEP
MLBr_00737|M.leprae_Br4923 NGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDRIIGEP
TH_2026|M.thermoresistible__bu HSRLAYSEDLADERKETAAGFWKRAS-------AFFADHGITVKRVLTDN
MMAR_2619|M.marinum_M HSRLAYSEILTDERKDTAAGFWLRAN-------GFFVDHGITVKRVLTDN
. . . : :.
MSMEG_2879|M.smegmatis_MC2_155 GNGWQQVTSELSFERSGP--------ERLLSTFVLLAQTTDSMARQQISR
Mvan_2876|M.vanbaalenii_PYR-1 GDGWSQVTSELSFERSGP--------ERLLSTFPLLAATAESMAQHRISY
MUL_2757|M.ulcerans_Agy99 GNGWTQVTSELSFERSGP--------ERFLSTFVLLAATAESMAEQRFTR
Mflv_5166|M.gilvum_PYR-GCK GDGWQQVTSELAFERSGP--------ERFLSTFPLLAELAALMNDG-LPR
MAV_2554|M.avium_104 GNGWHQVTSELSFERSGP--------ERILSTGPLLFAAIRTLGRGPVPD
Mb3590c|M.bovis_AF2122/97 GDGWRVAMATLTFERGVSTLGQQIVYARELSNLVELARRTAAADDPLIRE
Rv3560c|M.tuberculosis_H37Rv GDGWRVAMATLTFERGVSTLGQQIVYARELSNLVELARRTAAADDPLIRE
MAB_0597|M.abscessus_ATCC_1997 GDGWRVAMGTLTFERGVSTLGNQITYARELSRLAELAKSNGAADDPAIRE
MLBr_00737|M.leprae_Br4923 GTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGESISTF
TH_2026|M.thermoresistible__bu GSCYRSKNFAEALG-------------------PDIAHKRTRPYRPQTNG
MMAR_2619|M.marinum_M GNCYRSKVFADSLG-------------------EEIAHKRTRPYRPQTNG
* :
MSMEG_2879|M.smegmatis_MC2_155 DA---DLGRLVARIAGLHHMSMAVAGALERHEP-ADVPAAVVKVLGTTTE
Mvan_2876|M.vanbaalenii_PYR-1 DA---ALGRMVARVAGLHQMSTAVAGALERDEP-ADVPAAVVKLLGTSTE
MUL_2757|M.ulcerans_Agy99 DQ---QLGRLVARIAGLHQMSAAVAGALERNDP-ADLPAAVVKVLGTSTE
Mflv_5166|M.gilvum_PYR-GCK HN---DLGRYVARVAGLHQMSTAVAGALERHEP-ADTAAAVVKVLGTSTE
MAV_2554|M.avium_104 DRTAADIGDLMARLISLRQLSLSVARTLTHGGD-AANQAALVKDLGTLFE
Mb3590c|M.bovis_AF2122/97 RLTRAWTGLRAMRSYALATMEGPAVEQPGQDNVSKLLWANWHRNLG-ELA
Rv3560c|M.tuberculosis_H37Rv RLTRAWTGLRAMRSYALATMEGPAVEQPGQDNVSKLLWANWHRNLG-ELA
MAB_0597|M.abscessus_ATCC_1997 RLAQAYVGMRTMRAYALATMD---EERPGQDNVSKLLWANWHRDLG-ELA
MLBr_00737|M.leprae_Br4923 QSIQFMLADMAMKVEAARLIVYAAAARAERGEPDLGFISAASKCFASDIA
TH_2026|M.thermoresistible__bu KVERFNRTLTTEWAYAQTYRSEAERAGTYQHWLHHYNHHRPHTGIGGMTP
MMAR_2619|M.marinum_M KVERFNRTLASEWAYAQTYLSEVQRAATYQDWLHYYNHHRPHTGIGGKTP
. : :.
MSMEG_2879|M.smegmatis_MC2_155 GD-IADFADLHRGDDGALP--------QQARDLITAAVDQRPGFTLRGGT
Mvan_2876|M.vanbaalenii_PYR-1 GD-IADFADLHTGDETTTG--------PGFRDLIAVAVDQRPGFTLRGGT
MUL_2757|M.ulcerans_Agy99 SD-IAELADLADSTDLADSGAPHRPRDPEFAALVTAALDQRPGFTLRGGT
Mflv_5166|M.gilvum_PYR-GCK GD-IADFADLLTDACAPDHG--------GYRAMLDDAVVQRPGFTLRGGT
MAV_2554|M.avium_104 AESVGLIADLLEAAPPNSE----------LEAMLNTAWLHKPMFTLRGGT
Mb3590c|M.bovis_AF2122/97 MDVIGKPGMTMPDGEFD---------------EWQRLYLFTRADTIYGGS
Rv3560c|M.tuberculosis_H37Rv MDVIGKPGMTMPDGEFD---------------EWQRLYLFTRADTIYGGS
MAB_0597|M.abscessus_ATCC_1997 MEIIGTSTLLTNAGEMD---------------EWQRLFLFSRADTIYGGS
MLBr_00737|M.leprae_Br4923 MEVTTDAVQLFGGAGYTSDF------------PVERFMRDAKITQIYEGT
TH_2026|M.thermoresistible__bu IDRLRVHNLPVKNNQCPTSISRPPHCRGSKEAVSQFDALCANEPELAALR
MMAR_2619|M.marinum_M IERLRVHNLPVKNT------------------------------------
:
MSMEG_2879|M.smegmatis_MC2_155 NEVLRGVIARGLGLR-----------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 TEVLRGVIARGLGMR-----------------------------------
MUL_2757|M.ulcerans_Agy99 NEVLRGVIARGLGLR-----------------------------------
Mflv_5166|M.gilvum_PYR-GCK NEILRGVIARGLGMR-----------------------------------
MAV_2554|M.avium_104 NEVLRGVIARGMGLR-----------------------------------
Mb3590c|M.bovis_AF2122/97 NEIQRNIIAERVLGLPREAKG-----------------------------
Rv3560c|M.tuberculosis_H37Rv NEIQRNIIAERVLGLPREAKG-----------------------------
MAB_0597|M.abscessus_ATCC_1997 NEIQRNIISERVLGLPREAR------------------------------
MLBr_00737|M.leprae_Br4923 NQIQRVVMSRALLR------------------------------------
TH_2026|M.thermoresistible__bu ASVRDFLKADRAEFGWQPDVDSWLGQWDEAFSARLGAAGFVGLTIPKKYG
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_2757|M.ulcerans_Agy99 --------------------------------------------------
Mflv_5166|M.gilvum_PYR-GCK --------------------------------------------------
MAV_2554|M.avium_104 --------------------------------------------------
Mb3590c|M.bovis_AF2122/97 --------------------------------------------------
Rv3560c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_0597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
TH_2026|M.thermoresistible__bu GAGLTHLHRYVVIEELLAQGAPVAAHWVADRQVVPSLLSYGSEDQRKRLL
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_2757|M.ulcerans_Agy99 --------------------------------------------------
Mflv_5166|M.gilvum_PYR-GCK --------------------------------------------------
MAV_2554|M.avium_104 --------------------------------------------------
Mb3590c|M.bovis_AF2122/97 --------------------------------------------------
Rv3560c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_0597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
TH_2026|M.thermoresistible__bu PRIAAGTFFSSIGMSEHGAGSDLAAVQTKAVSADGGWLLNGTKVWTSGAH
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_2757|M.ulcerans_Agy99 --------------------------------------------------
Mflv_5166|M.gilvum_PYR-GCK --------------------------------------------------
MAV_2554|M.avium_104 --------------------------------------------------
Mb3590c|M.bovis_AF2122/97 --------------------------------------------------
Rv3560c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_0597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
TH_2026|M.thermoresistible__bu KAHQVVVLARTSPPDRQMRHSGFSQFLVPCGTDGVRIEPILMMNGDHHFN
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_2757|M.ulcerans_Agy99 --------------------------------------------------
Mflv_5166|M.gilvum_PYR-GCK --------------------------------------------------
MAV_2554|M.avium_104 --------------------------------------------------
Mb3590c|M.bovis_AF2122/97 --------------------------------------------------
Rv3560c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_0597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
TH_2026|M.thermoresistible__bu EVSFEDVFVPESDVLGQIGQGWHQVTAELSFERSGPERILSTVPLIVAAI
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_2757|M.ulcerans_Agy99 --------------------------------------------------
Mflv_5166|M.gilvum_PYR-GCK --------------------------------------------------
MAV_2554|M.avium_104 --------------------------------------------------
Mb3590c|M.bovis_AF2122/97 --------------------------------------------------
Rv3560c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_0597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
TH_2026|M.thermoresistible__bu RVLGNTPTTDDTTAGILGDLLARLISLRQLSIWVARTLNESHAAANQAAL
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------------------------------------------
MUL_2757|M.ulcerans_Agy99 --------------------------------------------------
Mflv_5166|M.gilvum_PYR-GCK --------------------------------------------------
MAV_2554|M.avium_104 --------------------------------------------------
Mb3590c|M.bovis_AF2122/97 --------------------------------------------------
Rv3560c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_0597|M.abscessus_ATCC_1997 --------------------------------------------------
MLBr_00737|M.leprae_Br4923 --------------------------------------------------
TH_2026|M.thermoresistible__bu VKDLGTQFEQESTDVIIDVLNAVEATPELAALSATAMLHKPVFTLRGGTN
MMAR_2619|M.marinum_M --------------------------------------------------
MSMEG_2879|M.smegmatis_MC2_155 --------------
Mvan_2876|M.vanbaalenii_PYR-1 --------------
MUL_2757|M.ulcerans_Agy99 --------------
Mflv_5166|M.gilvum_PYR-GCK --------------
MAV_2554|M.avium_104 --------------
Mb3590c|M.bovis_AF2122/97 --------------
Rv3560c|M.tuberculosis_H37Rv --------------
MAB_0597|M.abscessus_ATCC_1997 --------------
MLBr_00737|M.leprae_Br4923 --------------
TH_2026|M.thermoresistible__bu EVLRGVVARGMGLR
MMAR_2619|M.marinum_M --------------