For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0434 | - | 100% (264) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_2570 | - | 3e-16 | 34.09% (176) | PUTATIVE alpha/beta hydrolase fold |
M. thermoresistible (build 8) | TH_2707 | - | 3e-12 | 33.78% (148) | PUTATIVE putative alpha/beta hydrolase fold |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2330c | - | 7e-98 | 68.36% (256) | hypothetical protein Mb2330c |
M. gilvum PYR-GCK | Mflv_3465 | - | 2e-13 | 37.70% (122) | peptidase S15 |
M. tuberculosis H37Rv | Rv2307c | - | 1e-98 | 68.75% (256) | hypothetical protein Rv2307c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2608 | - | 8e-11 | 33.08% (130) | putative hydrolase, alpha/beta fold |
M. marinum M | MMAR_3680 | - | 6e-11 | 36.22% (127) | hypothetical protein MMAR_3680 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_2203 | - | 4e-12 | 34.38% (128) | alpha/beta hydrolase |
M. ulcerans Agy99 | MUL_1035 | - | 2e-09 | 34.11% (129) | hypothetical protein MUL_1035 |
M. vanbaalenii PYR-1 | Mvan_2419 | - | 6e-10 | 29.12% (182) | alpha/beta hydrolase fold |
CLUSTAL 2.0.9 multiple sequence alignment MUL_1035|M.ulcerans_Agy99 ---------------------------MTQRQDVRFPC------------ Mvan_2419|M.vanbaalenii_PYR-1 ---------------------------MT-RQEVQIPA------------ MAB_2608|M.abscessus_ATCC_1997 ----------------------------MNRQSIRFNS------------ MSMEG_2203|M.smegmatis_MC2_155 ----------------------------MTYTEFTFHS------------ MMAR_3680|M.marinum_M ---------------------------MVSTLGTAFES------------ Mflv_3465|M.gilvum_PYR-GCK ------------------------MTAGWTTSAVSFPC------------ Mb2330c|M.bovis_AF2122/97 MSLKRCRALPVVAIVALVASGVITFIWSQQRRLIYFPSAGPVPSASSVLP Rv2307c|M.tuberculosis_H37Rv MSLKRCRALPVVAIVALVASGVIMFIWSQQRRLIYFPSAGPVPSASSVLP TH_0434|M.thermoresistible__bu -----------------VATGVLGLLWSQQRRLIYFPSPGPVPSATTVSV : . MUL_1035|M.ulcerans_Agy99 ----------GEALISAWLYRPAGADPARPVPMLVMAHGLGAVRTMRLDA Mvan_2419|M.vanbaalenii_PYR-1 ----------DGGQIAAYVYRPQVTGGG--TACIVMAHGFTGTRDDGLPD MAB_2608|M.abscessus_ATCC_1997 ----------HGIDCEAWLYRAQTVEDT--APIVVMAHGVGGTKDSGLEP MSMEG_2203|M.smegmatis_MC2_155 ----------GGQRCSAWHFPAGSGGSG--NPVVVMAHGFGGTKDSGLQP MMAR_3680|M.marinum_M ----------RGTRCAAWFTRP-AGPGP--YPLVVLAHGLGANHTMALAR Mflv_3465|M.gilvum_PYR-GCK ----------DGEQIAGVLYRPEGGAPP--FPCVVFAHGFSGTMDWILPD Mb2330c|M.bovis_AF2122/97 AGRDVVVETQDGMRLGGWYFPHTSGGSG---PAVLVCNGNAGDRSM-RAE Rv2307c|M.tuberculosis_H37Rv AGRDVVVETQDGMRLGGWYFPHTSGGSG---PAVLVCNGNAGDRSM-RAE TH_0434|M.thermoresistible__bu DARDVVLRTADGLELGAWYFPAPGGRPS---PAVLVSNGNGGDRSG-RVA . . ::..:* . MUL_1035|M.ulcerans_Agy99 YAQRFSAAGYACLVFDYRNFGDSEGQPRQLLDIRMQLQDWAAAVAYARTC Mvan_2419|M.vanbaalenii_PYR-1 YAEAFCAAGHTVVLFDYRHFGASTGEPRQLLDIAEQRRDYHTVIAWARHL MAB_2608|M.abscessus_ATCC_1997 FAVRLAEAGMHALAFDYRGFGASDGFPRQHVSFTHQIGDYHAAVNMARRL MSMEG_2203|M.smegmatis_MC2_155 FAERFSAAGLDAVAFDYRGFGASEGEPRQSISVERQLADYDAAIRAAQAM MMAR_3680|M.marinum_M YERHFAAAGIATLAFDYRNLGASDGTPRQRLSLRRHRQDIAAALEFARSL Mflv_3465|M.gilvum_PYR-GCK FAAVFCAAGLAVLTFDYRGFGSSEGTPRQIVNSARQLEDIRAALDVVRNR Mb2330c|M.bovis_AF2122/97 LAVALHGLGLSVLLFDYRGYGGNPGRPSE----QGLAADARAAQEWLSGQ Rv2307c|M.tuberculosis_H37Rv LAVALHGLGLSVLLFDYRGYGGNPGRPSE----QGLAADARAAQEWLSGQ TH_0434|M.thermoresistible__bu LAVSLRRLGMAVLLFDYRGYGGNPGRPSE----EGLALDIRAAHDWLREQ : * : **** * . * * : * :. MUL_1035|M.ulcerans_Agy99 DGVDQARIGLWGTSFGGGHVIATAARLPGIAAVVAQCPFTDGIASVL--- Mvan_2419|M.vanbaalenii_PYR-1 DGVDPNRIVVWGSSFSGGHVLAVAAEDPRIAAVIAQAPFTDALATLR--- MAB_2608|M.abscessus_ATCC_1997 PGVDPTRIVLWGVSLAGGHVMAVAGARNDVAAVIALTPLVDGIAAARSAM MSMEG_2203|M.smegmatis_MC2_155 PGVDPRKVVLWGSSFSGSHVLRAAARNTDVAAVIAMTPLTSGLAASRAAV MMAR_3680|M.marinum_M PDVDASRVALWGTSLGAMHVLLIAARRRDLCAVVVQCPIVDGPATLR--- Mflv_3465|M.gilvum_PYR-GCK ADVDPGRIGLWGTSLGGSHVLQIAAEDPRVAAVVANVPALDMYTGLRGRH Mb2330c|M.bovis_AF2122/97 SDVDPARIAYFGESLGAAVAVGLAVQRP-PAALVLRSPFTS--------- Rv2307c|M.tuberculosis_H37Rv SDVDPARIAYFGESLGAAVAVGLAVQRP-PAALVLRSPFTS--------- TH_0434|M.thermoresistible__bu PDVDPARMVYFGESLGAAVALELAVERP-PAALVLRSPFTS--------- .** :: :* *:.. .: * .*:: * . MUL_1035|M.ulcerans_Agy99 ---------AIAPTTAIRVTARSMRDLIGSRLGRPPVMIPTAGKPGEVAL Mvan_2419|M.vanbaalenii_PYR-1 ---------EIPPGNIPLLLIAAVRDQVGAWRGRPPHTVAAVGSPGTVAA MAB_2608|M.abscessus_ATCC_1997 --------TEHSAGTLLRSAVTGLRSR----LGRQQRTIPIVGRAGELAA MSMEG_2203|M.smegmatis_MC2_155 --------TQRDVATALRWTLKGVKSRVAAAVGGAPTMMPLTAKPGEPGA MMAR_3680|M.marinum_M ---------RLGLAATLRAGPAIVEDALRCAAGLRRRYIPIVGPPGSLAA Mflv_3465|M.gilvum_PYR-GCK RSPDYRPGPAQIVVAVARLLSAAVVDEVRGRLGRSPRYLPVYGRLGR-AF Mb2330c|M.bovis_AF2122/97 --------------------------------------------LAEVGA Rv2307c|M.tuberculosis_H37Rv --------------------------------------------LAEVGA TH_0434|M.thermoresistible__bu --------------------------------------------LADVAR . . MUL_1035|M.ulcerans_Agy99 MTAPDAYPGYLGLMPQGTQVPNEVAARIGIKVLGYRPGRSARKIACPILF Mvan_2419|M.vanbaalenii_PYR-1 LTSPDAKPGFEAIIGPNSLWRNEFAARLMFTFAFNRPGRKAAKLRMPVLL MAB_2608|M.abscessus_ATCC_1997 LTSDGYYEAHLAIAGP--AWRNEIDATVGTQLVSYRPTRCASRIGCPILV MSMEG_2203|M.smegmatis_MC2_155 LALDGAYESYLSIAGP--TWRNEVDAGVGMELARVRTAAAAKALKCPVLV MMAR_3680|M.marinum_M VTAAGALQGWRSTVEPGGSFDNRIAASNLLGIGVTSTKRAARQISAPLLV Mflv_3465|M.gilvum_PYR-GCK FADPALAQRFRAVEAQAPSWRNAVAPRFLLHAPRYRDG-TIERVRCPVLV Mb2330c|M.bovis_AF2122/97 VHYP-------------------WLPLRRLLLDHYPSIERIASVHAPVLV Rv2307c|M.tuberculosis_H37Rv VHYP-------------------WLPLRRLLLDHYPSIERIASVHAPVLV TH_0434|M.thermoresistible__bu VHYP-------------------WLPARWLLLDRYPSIDRIGSLRAPLLI . . : *:*. MUL_1035|M.ulcerans_Agy99 CVCETDSVAPAGPTLRYAARAPRGEVSGEVIRYPEGHFAIYLGDAFE-HV Mvan_2419|M.vanbaalenii_PYR-1 CVCDDDVVTPPGPSVEAAHRAPRG----ELCRYPYGHFDIYHDP----KV MAB_2608|M.abscessus_ATCC_1997 QIADFDRAAPP-HAAAKAAFKARA----EVRHYPCDHFGVYHGQECHELV MSMEG_2203|M.smegmatis_MC2_155 QIADFDRFVPA-DSVAKTAVQARA----QVHHYACDHFDVWPGHDWFDTA MMAR_3680|M.marinum_M CVSRRETLMDPRHAEVVAGRAPRG----IARHYDGDHFEIYH-RPLVDSL Mflv_3465|M.gilvum_PYR-GCK TLARDDAEVST-PFVERKVRRGRD---VEIRKYPAGHFDMYHGAVR-DEV Mb2330c|M.bovis_AF2122/97 IAGGSDDIVPATLSEWLVAAAAEPKRYVVVPGVGHNDPELLDGR----VM Rv2307c|M.tuberculosis_H37Rv IAGGSDDIVPATLSERLVAAAAEPKRYVVVPGVGHNDPELLDGR----VM TH_0434|M.thermoresistible__bu VAGDRDDIVPESQSRRLFDAAPEPKRYVLVPDAGHNDLTLLAGR----QM : . .. : MUL_1035|M.ulcerans_Agy99 VADQLGFLDKHLKPAGQP------- Mvan_2419|M.vanbaalenii_PYR-1 KADQLEFLARVVGDRTA-------- MAB_2608|M.abscessus_ATCC_1997 IGHQISFLSRHLSIEAVSHTEALHG MSMEG_2203|M.smegmatis_MC2_155 VTDQIAFLRRTLSLR---------- MMAR_3680|M.marinum_M LADQTAFLREHLHVEDT-------- Mflv_3465|M.gilvum_PYR-GCK ARDQREFLIRHLQPDRAARKDR--- Mb2330c|M.bovis_AF2122/97 LDAIRRFLTETAVLGQ--------- Rv2307c|M.tuberculosis_H37Rv LDAIRRFLTETAVLGQ--------- TH_0434|M.thermoresistible__bu IGAIEEFLAPILHTA---------- **