For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRRAFLAKAAGAGAAAVLTDWAAPVIEKAYGAGPCSGHLTDIEHIVLCLQENRSFDHYFGTLSAVDGFDT PTPLFQQKGWNPETQALDPTGITLPYRINTTGGPNGVGECVNDPDHQWIAAHLSWNGGANDGWLPAQART RSVANTPVVMGYYARPDIPIHYLLADTFTICDQYFSSLLGGTMPNRLYWISATVNPDGDQGGPQIVEPAI QPKLTFTWRIMPQNLSDAGISWKVYNSKLLGGLNDTSLSRNGYVGSFKQAADPRSDLARYGIAPAYPWDF IRDVINNTLPQVSWVVPLTVESEHPSFPVAVGAVTIVNLIRVLLRNPAVWEKTALIIAYDEHGGFFDHVT PLTAPEGTPGEWIPNSVDIDKVDGSGGIRGPIGLGFRVPCFVISPYSRGGLMVHDRFDHTSQLQLIGKRF GVPVPNLTPWRASVTGDMTSAFNFAAPPDPSPPNLDHPVRQLPKVAKCVPNVVLGFLNEGLPYRVPYPQT TPVQESGPARPIPSGIC*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2349c | plcC | - | 100% (508) | PROBABLE PHOSPHOLIPASE C 3 PLCC |
M. tuberculosis H37Rv | Rv2351c | plcA | 0.0 | 68.09% (514) | membrane-associated phospholipase C |
M. tuberculosis H37Rv | Rv2350c | plcB | 0.0 | 67.64% (513) | membrane-associated phospholipase C |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1784c | plcD | 0.0 | 68.37% (509) | phospholipase C 4 PLCD |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0555 | - | 2e-89 | 38.98% (508) | non-hemolytic phospholipase C |
M. marinum M | MMAR_3656 | plcB_5 | 0.0 | 87.80% (508) | membrane-associated phospholipase C 2 PlcB_5 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2799 | plcB | 0.0 | 66.60% (512) | membrane-associated phospholipase C 2 PlcB |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv2349c|M.tuberculosis_H37Rv --------MSRRAFLAKAAGAGAAAVLTDWAAPVIEKAYG-AGPCSGHLT MMAR_3656|M.marinum_M MSRDAFAGMSRREFMAKATGVGAGGFLTDWAAPVIEKAYA-AGPCSGHLT Mb1784c|M.bovis_AF2122/97 MSQSHIGGVSRREFLAKVAAGG-AGALMSFAGPVIEKAYG-AGPCSGHLT MUL_2799|M.ulcerans_Agy99 --------MSRREFMAKLAAASSAGAMMSLAGPVIEKAYG-AGPCSGHLT MAB_0555|M.abscessus_ATCC_1997 -----MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLR ::** :::. :. . . . . :::. . ..* ** * Rv2349c|M.tuberculosis_H37Rv DIEHIVLCLQENRSFDHYFGTLSAVDGFDTPTPLFQQKGWNPETQA--LD MMAR_3656|M.marinum_M DIEHIVLCLQENRSFDHYFGSLSSVDGFDTPTSLFQQKGWDPRTQS--VD Mb1784c|M.bovis_AF2122/97 DIEHFVFFMQENRSFDHYFGTLSGTDGFNTVSPLFQQKGWNPMTQA--LD MUL_2799|M.ulcerans_Agy99 DIEHFVFMLQENRSFDHYFGSLSGINGFDTPSSAFQQKGWNPQTQS--ID MAB_0555|M.abscessus_ATCC_1997 DVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVTLSTGKSVFHQPDPQN *:**.*. : **********:**. **: :. ..* . *. : Rv2349c|M.tuberculosis_H37Rv PTGITLPYRINTTGGPNGVGECVNDPDHQWIAAHLSWNGGANDGWLPAQA MMAR_3656|M.marinum_M PAGTTVPYRIDTTRGPNGVGECVNDPDHQWIAAHLSWNGGGNDGWLAAQA Mb1784c|M.bovis_AF2122/97 ATGVTMPYRFDTTRGPFLDGACVNDPDHSWVAMHESWNGGVNDNWLPAQA MUL_2799|M.ulcerans_Agy99 PAGVTIPYRFDTTRGPLLNGACANDPGHQWIDMHRAFNNGANDNWLGAQA MAB_0555|M.abscessus_ATCC_1997 PDGYLLPFHLDTAVNSVQK---IPTTSHAWSVQHDSWNHGKMDNWMAAHR . * :*::::*: .. ..* * * ::* * *.*: *: Rv2349c|M.tuberculosis_H37Rv RTRSVA-NTPVVMGYYARPDIPIHYLLADTFTICDQYFSSLLGGTMPNRL MMAR_3656|M.marinum_M RTRSQA-NTPVVMGYYARPDIPIHYLLADTFTICDQYHSSLLGGTMPNRL Mb1784c|M.bovis_AF2122/97 KTRSAA-HTPTVMGYYTRQDIPIHYLLADAFTVCDRYFCSVLGPTLPNRL MUL_2799|M.ulcerans_Agy99 QAQTLQGNVPVTMGYYTRQDQPIHYLLADTFTICDGYHCSLIGGTSPNRL MAB_0555|M.abscessus_ATCC_1997 KADGEH--YPYVMGYYERADIPFHFALAEAFTVCDNFHSSVMGPTWPNRM :: * .**** * * *:*: **::**:** :..*::* * ***: Rv2349c|M.tuberculosis_H37Rv YWISATVNPDGDQGGPQIVEPAIQPKLTFTWRIMPQNLSDAGISWKVYNS MMAR_3656|M.marinum_M YWISGTVNPDGDKGGPQIVEPTIQPKLTFSWRLMPENLSDAGVSWKVYNS Mb1784c|M.bovis_AF2122/97 YWLSATIDPDGQNGGPELQSPTFQPVRRFGWRIMPQNLSDAGVSWKVYRN MUL_2799|M.ulcerans_Agy99 YWMSAWVDPNGEQGGPLLVDPNIQPQGRFSWRTMPDNLSDAGISWKVYQN MAB_0555|M.abscessus_ATCC_1997 MWMTGTIDPDAAHGGPIIRNTPVS--GGYGWTTYAERLEAAGVSWRVYAE *::. ::*:. :*** : .. .. : * .:.*. **:**:** . Rv2349c|M.tuberculosis_H37Rv -KLLGGLNDTSLSRNGYVGSFKQAADPRSDLARYGIAPAYPWDFIRDVIN MMAR_3656|M.marinum_M -KLLGGLNDTSLSRNGYVGSFKQAGDPRSDLARYGIAPRYPADFVLDIMN Mb1784c|M.bovis_AF2122/97 -KTLGPIS-SVLTYGSLVTSFKQSADPRSDLVRFGVAPSYPASFAADVLA MUL_2799|M.ulcerans_Agy99 -KLLGALNNTVIGYDGMLNDFVQARDPRSNMARYGIAPTYPLDFVADVAS MAB_0555|M.abscessus_ATCC_1997 EDDYGGCN--VLK---LFSRFQRSR-PGEPLYDKGIAPVRATQFEDDARA . * . : . * :: * . : *:** . .* * Rv2349c|M.tuberculosis_H37Rv NTLPQVSWVVPLTVESEHPSFPVA--VGAVTIVNLIRVLLRNPAVWEKTA MMAR_3656|M.marinum_M NRLPQVSWVVPLTVESEHPSFPVA--VGAVTIVNLIRALLRNPAVWEKTA Mb1784c|M.bovis_AF2122/97 NRLPRVSWVIPNVLESEHPAVPAA--AGAFAIVNILRILLANPAVWEKTA MUL_2799|M.ulcerans_Agy99 NRLPQVSWVLPGFQVSEHPGVPVAPAVGGTAIVNILRILLSNPAVWEKTA MAB_0555|M.abscessus_ATCC_1997 GRLPAVSWLIMTSTASEHPDYRPA--DGAAYIASKIDAIAANPEVWAKTV . ** ***:: **** * *. *.. : : ** ** **. Rv2349c|M.tuberculosis_H37Rv LIIAYDEHGGFFDHVTPLTAPEGTPGEWIPNSVDIDKVDGSGGIRGPIGL MMAR_3656|M.marinum_M LIIAYDEHGGFFDHVTPPTPPEGTPGEWIPPTVDINTVDGSGGIRGPIGL Mb1784c|M.bovis_AF2122/97 LIVSYDENGGFFDHVVPATAPAGTPGEYVT-VPDIDQVPGSGGIRGPIGL MUL_2799|M.ulcerans_Agy99 LIVSFDENGGFFDHVTPTTAPEGTPGEWIT-VPDINAVTGSGGIRGPIGL MAB_0555|M.abscessus_ATCC_1997 FILNYDENDGLFDHVVPPTPPPGTPGEWVK--------------GVPIGG :*: :**:.*:****.* *.* *****:: *** Rv2349c|M.tuberculosis_H37Rv GFRVPCFVISPYSRGGLMVHDRFDHTSQLQLIGKRFGVPVPNLTPWRASV MMAR_3656|M.marinum_M GYRVPCFVISPYSRGGLLAHERFDHTSQLQLIGKRFGVPVPNLTPWRASV Mb1784c|M.bovis_AF2122/97 GFRVPCFVISPYSRGPQMVHDTFDHTSQLRLLETRFGVPVPNLTAWRRSV MUL_2799|M.ulcerans_Agy99 GYRVPCFVISPYSRGPLMVHDIFDHTSQLRLLEQRFGVPVPNLTTWRRGV MAB_0555|M.abscessus_ATCC_1997 GFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRKT *:***.:****:* * :. : ***** *::: ** **:: ** . Rv2349c|M.tuberculosis_H37Rv TGDMTSAFNFAAPPDPSPPNLDHP-VRQLPKVAKCVPNVVLGFLNEGLPY MMAR_3656|M.marinum_M TGDMTSAFNFAVPPNPSPPNLDHP-AKQLPKLINCVPNAVLGFLNEGLPY Mb1784c|M.bovis_AF2122/97 TGDMTSTFNFAVPPNSSWPNLDYPGLHALSTVPQCVPNAALGTINRGIPY MUL_2799|M.ulcerans_Agy99 TGDMTSTFNFAVPPNASPPNLDHPALKAVPQQVQCVPDTVTVFTKTVPPY MAB_0555|M.abscessus_ATCC_1997 FGNLLSAFGFDSPVRPAPELPDTAAVVAAADRTDTRP----------PPV *:: *:*.* * .: * . . . * * Rv2349c|M.tuberculosis_H37Rv RVPYPQTTPVQESGP-ARPIPSGIC MMAR_3656|M.marinum_M RVPYPQTTPTQESGP-VRGVPSGIC Mb1784c|M.bovis_AF2122/97 RVPDPQIMPTQETTP-TRGIPSGPC MUL_2799|M.ulcerans_Agy99 RVPFPQVMPSQETSP-TRGIPSGPC MAB_0555|M.abscessus_ATCC_1997 IPPAPQTSPVQEPGSRPRRYPRR-- * ** * **. . * *