For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRREFMAKLAAASSAGAMMSLAGPVIEKAYGAGPCSGHLTDIEHFVFMLQENRSFDHYFGSLSGINGFDT PSSAFQQKGWNPQTQSIDPAGVTIPYRFDTTRGPLLNGACANDPGHQWIDMHRAFNNGANDNWLGAQAQA QTLQGNVPVTMGYYTRQDQPIHYLLADTFTICDGYHCSLIGGTSPNRLYWMSAWVDPNGEQGGPLLVDPN IQPQGRFSWRTMPDNLSDAGISWKVYQNKLLGALNNTVIGYDGMLNDFVQARDPRSNMARYGIAPTYPLD FVADVASNRLPQVSWVLPGFQVSEHPGVPVAPAVGGTAIVNILRILLSNPAVWEKTALIVSFDENGGFFD HVTPTTAPEGTPGEWITVPDINAVTGSGGIRGPIGLGYRVPCFVISPYSRGPLMVHDIFDHTSQLRLLEQ RFGVPVPNLTTWRRGVTGDMTSTFNFAVPPNASPPNLDHPALKAVPQQVQCVPDTVTVFTKTVPPYRVPF PQVMPSQETSPTRGIPSGPC*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2799 | plcB | - | 100% (511) | membrane-associated phospholipase C 2 PlcB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1784c | plcD | 0.0 | 69.47% (511) | phospholipase C 4 PLCD |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2350c | plcB | 0.0 | 73.54% (514) | membrane-associated phospholipase C |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0555 | - | 2e-87 | 36.78% (503) | non-hemolytic phospholipase C |
M. marinum M | MMAR_3566 | plcB | 0.0 | 99.61% (511) | membrane-associated phospholipase C 2 PlcB |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MUL_2799|M.ulcerans_Agy99 ----------MSRREFMAKLAAASSAGAMMSLAGPVIEKAYG-AGPCSGH MMAR_3566|M.marinum_M MLVSKHPVDGMSRREFMAKLAAASSAGAMMSLAGPVIEKAYG-AGPCSGH Rv2350c|M.tuberculosis_H37Rv ----------MTRRQFFAKAAAATTAGAFMSLAGPIIEKAYG-AGPCPGH Mb1784c|M.bovis_AF2122/97 --MSQSHIGGVSRREFLAKVAAGG-AGALMSFAGPVIEKAYG-AGPCSGH MAB_0555|M.abscessus_ATCC_1997 -------MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGS ::**.:::. *. .* :*: . :::. . ..* .* MUL_2799|M.ulcerans_Agy99 LTDIEHFVFMLQENRSFDHYFGSLSGINGFD--TPSSAFQQKGWNPQTQS MMAR_3566|M.marinum_M LTDIEHFVFMLQENRSFDHYFGSLSGINGFD--TPSSAFQQKGWNPQTQS Rv2350c|M.tuberculosis_H37Rv LTDIEHIVLLMQENRSFDHYFGTLSDTRGFDDTTPPVVFAQSGWNPMTQA Mb1784c|M.bovis_AF2122/97 LTDIEHFVFFMQENRSFDHYFGTLSGTDGFN--TVSPLFQQKGWNPMTQA MAB_0555|M.abscessus_ATCC_1997 LRDVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVTLSTGKSVFHQPDP * *:**.*.:: **********:**. **: * .. .:. MUL_2799|M.ulcerans_Agy99 IDPAGVTIPYRFDTTRGPLLNGACANDPGHQWIDMHRAFNNGANDNWLGA MMAR_3566|M.marinum_M IDPAGVTIPYRFDTTRGPLLNGACVNDPGHQWIDMHRAFNNGANDNWLGA Rv2350c|M.tuberculosis_H37Rv VDPAGVTLPYRFDTTRGPLVAGECVNDPDHSWIGMHNSWNGGANDNWLPA Mb1784c|M.bovis_AF2122/97 LDATGVTMPYRFDTTRGPFLDGACVNDPDHSWVAMHESWNGGVNDNWLPA MAB_0555|M.abscessus_ATCC_1997 QNPDGYLLPFHLDTAVNSVQK---IPTTSHAWSVQHDSWNHGKMDNWMAA :. * :*:::**: ... ..* * * ::* * ***: * MUL_2799|M.ulcerans_Agy99 QAQAQTLQGNVPVTMGYYTRQDQPIHYLLADTFTICDGYHCSLIGGTSPN MMAR_3566|M.marinum_M QAQAQTLQGNVPVTMGYYTRQDQPIHYLLADTFTICDGYHCSLIGGTSPN Rv2350c|M.tuberculosis_H37Rv QVPFSPLQGNVPVTMGFYTRRDLPIHYLLADTFTVCDGYFCSLLGGTTPN Mb1784c|M.bovis_AF2122/97 QAKTRSAA-HTPTVMGYYTRQDIPIHYLLADAFTVCDRYFCSVLGPTLPN MAB_0555|M.abscessus_ATCC_1997 HRKADGEH--YPYVMGYYERADIPFHFALAEAFTVCDNFHSSVMGPTWPN : * .**:* * * *:*: **::**:** :..*::* * ** MUL_2799|M.ulcerans_Agy99 RLYWMSAWVDPNGEQGGPLLVDPNIQPQGRFSWRTMPDNLSDAGISWKVY MMAR_3566|M.marinum_M RLYWMSAWIDPNGEQGGPLLVDPNIQPQGRFSWRTMPDNLSDAGISWKVY Rv2350c|M.tuberculosis_H37Rv RLYWMSAWIDPDGTDGGPVLIEPNIQPLQHYSWRIMPENLEDAGVSWKVY Mb1784c|M.bovis_AF2122/97 RLYWLSATIDPDGQNGGPELQSPTFQPVRRFGWRIMPQNLSDAGVSWKVY MAB_0555|M.abscessus_ATCC_1997 RMMWMTGTIDPDAAHGGPIIRNTPVS--GGYGWTTYAERLEAAGVSWRVY *: *::. :**:. .*** : .. .. :.* .:.*. **:**:** MUL_2799|M.ulcerans_Agy99 QN-KLLGALNNTVIGYDGMLNDFVQARDPRSNMARYGIAPTYPLDFVADV MMAR_3566|M.marinum_M QN-KLLGALNNTVIGYDGMLNDFVQARDPRSNMARYGIAPTYPLDFVADV Rv2350c|M.tuberculosis_H37Rv QN-KLLGALNNTVVGYNGLVNDFKQAADPRSNLARFGISPTYPLDFAADV Mb1784c|M.bovis_AF2122/97 RN-KTLGPIS-SVLTYGSLVTSFKQSADPRSDLVRFGVAPSYPASFAADV MAB_0555|M.abscessus_ATCC_1997 AEEDDYGGCN-----VLKLFSRFQRSR-PGEPLYDKGIAPVRATQFEDDA : . * . :.. * :: * . : *::* . .* *. MUL_2799|M.ulcerans_Agy99 ASNRLPQVSWVLPGFQVSEHPGVPVAPAVGGTAIVNILRILLSNPAVWEK MMAR_3566|M.marinum_M ASNRLPQVSWVLPGFQVSEHPGVPVAPAVGGTAIVNILRILLSNPAVWEK Rv2350c|M.tuberculosis_H37Rv RNNRLPKVSWVLPGFLLSEHPAFPVN--VGAVAIVDALRILLSNPAVWEK Mb1784c|M.bovis_AF2122/97 LANRLPRVSWVIPNVLESEHPAVPAA--AGAFAIVNILRILLANPAVWEK MAB_0555|M.abscessus_ATCC_1997 RAGRLPAVSWLIMTSTASEHPDYRPA--DGAAYIASKIDAIAANPEVWAK .*** ***:: **** *. *.. : : :** ** * MUL_2799|M.ulcerans_Agy99 TALIVSFDENGGFFDHVTPTTAPEGTPGEWITVPDINAVTGSGGIRGPIG MMAR_3566|M.marinum_M TALIVSFDENGGFFDHVTPTTAPEGTPGEWITVPDINAVTGSGGIRGPIG Rv2350c|M.tuberculosis_H37Rv TALIVNYDENGGFFDHVVPPTPPPGTPGEFVTVPDIDSVPGSGGIRGPIG Mb1784c|M.bovis_AF2122/97 TALIVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPIG MAB_0555|M.abscessus_ATCC_1997 TVFILNYDENDGLFDHVVPPTPPPGTPGEWVKG-------------VPIG *.:*:.:***.*:****.*.*.* *****::. *** MUL_2799|M.ulcerans_Agy99 LGYRVPCFVISPYSRGPLMVHDIFDHTSQLRLLEQRFGVPVPNLTTWRRG MMAR_3566|M.marinum_M LGYRVPCFVISPYSRGPLMVHDIFDHTSQLRLLEQRFGVPVPNLTTWRRG Rv2350c|M.tuberculosis_H37Rv LGFRVPCLVISPYSRGPLMVHDTFDHTSTLKLIRARFGVPVPNLTAWRDA Mb1784c|M.bovis_AF2122/97 LGFRVPCFVISPYSRGPQMVHDTFDHTSQLRLLETRFGVPVPNLTAWRRS MAB_0555|M.abscessus_ATCC_1997 GGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRK *:***.:****:* * :. : ***** *:::. ** **:: ** MUL_2799|M.ulcerans_Agy99 VTGDMTSTFNFAVPPNASPPNLDHPALKAVPQQVQCVPDTVT-VFTKTVP MMAR_3566|M.marinum_M VTGDMTSTFNFAVPPNASPPNLDHPALKAVPQQVQCVPDTVT-VFTKTVP Rv2350c|M.tuberculosis_H37Rv TVGDMTSTFNFAAPPNPSKPNLDHPRLNALPKLPQCVPNAVLGTVTKTAI Mb1784c|M.bovis_AF2122/97 VTGDMTSTFNFAVPPNSSWPNLDYPGLHALSTVPQCVPNAALGTINR-GI MAB_0555|M.abscessus_ATCC_1997 TFGNLLSAFGFDSPVRPAPELPDTAAVVAAADRTDTRP-----------P . *:: *:*.* * ..: * . : * . : * MUL_2799|M.ulcerans_Agy99 PYRVPFPQVMPSQE-TSPTRGIPSGPC MMAR_3566|M.marinum_M PYRVPFPQVMPSQE-TSPTRGIPSGPC Rv2350c|M.tuberculosis_H37Rv PYRVPFPQSMPTQE-TAPTRGIPSGLC Mb1784c|M.bovis_AF2122/97 PYRVPDPQIMPTQE-TTPTRGIPSGPC MAB_0555|M.abscessus_ATCC_1997 PVIPPAPQTSPVQEPGSRPRRYPRR-- * * ** * ** : .* *