For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSLRDVEHVVVLMMENRSFDHYFGTLSGV RGFDDPTAVTLSTGKSVFHQPDPQNPDGYLLPFHLDTAVNSVQKIPTTSHAWSVQHDSWNHGKMDNWMAA HRKADGEHYPYVMGYYERADIPFHFALAEAFTVCDNFHSSVMGPTWPNRMMWMTGTIDPDAAHGGPIIRN TPVSGGYGWTTYAERLEAAGVSWRVYAEEDDYGGCNVLKLFSRFQRSRPGEPLYDKGIAPVRATQFEDDA RAGRLPAVSWLIMTSTASEHPDYRPADGAAYIASKIDAIAANPEVWAKTVFILNYDENDGLFDHVVPPTP PPGTPGEWVKGVPIGGGFRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRKTFGNL LSAFGFDSPVRPAPELPDTAAVVAAADRTDTRPPPVIPPAPQTSPVQEPGSRPRRYPRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0555 | - | - | 100% (479) | non-hemolytic phospholipase C |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1784c | plcD | 6e-91 | 41.08% (499) | phospholipase C 4 PLCD |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | Rv2350c | plcB | 1e-93 | 39.68% (504) | membrane-associated phospholipase C |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_4722 | plcB_6 | 1e-100 | 41.15% (503) | membrane-associated phospholipase C 2 PlcB_6 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2799 | plcB | 1e-87 | 36.78% (503) | membrane-associated phospholipase C 2 PlcB |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Rv2350c|M.tuberculosis_H37Rv ---------MTRRQFFAKAAAATTAGAFMSLAGPIIEKAYG-AGPCPGHL MUL_2799|M.ulcerans_Agy99 ---------MSRREFMAKLAAASSAGAMMSLAGPVIEKAYG-AGPCSGHL Mb1784c|M.bovis_AF2122/97 -MSQSHIGGVSRREFLAKVAAGG-AGALMSFAGPVIEKAYG-AGPCSGHL MMAR_4722|M.marinum_M MTWADAVDKMSRREFLAKLAAATSTGALMSLAGPVIEKAYG-AGPCSGHL MAB_0555|M.abscessus_ATCC_1997 ------MSPLTRRRLLTSAAGTAAFSAAVSLMPANLQRVLAQPAPRSGSL ::**.:::. *. .* :*: . :::. . ..* .* * Rv2350c|M.tuberculosis_H37Rv TDIEHIVLLMQENRSFDHYFGTLSDTRGFDDTTPPVVFAQSGWNPMTQAV MUL_2799|M.ulcerans_Agy99 TDIEHFVFMLQENRSFDHYFGSLSGINGFD--TPSSAFQQKGWNPQTQSI Mb1784c|M.bovis_AF2122/97 TDIEHFVFFMQENRSFDHYFGTLSGTDGFN--TVSPLFQQKGWNPMTQAL MMAR_4722|M.marinum_M TDIEHIVLLMQENRSFDHYFGTLSDVEGFD--TPTPLFAQKGWNPRTQAP MAB_0555|M.abscessus_ATCC_1997 RDVEHVVVLMMENRSFDHYFGTLSGVRGFDDPTAVTLSTGKSVFHQPDPQ *:**.*.:: **********:**. **: * .. .:. Rv2350c|M.tuberculosis_H37Rv DPAGVTLPYRFDTTRGPLVAGECVNDPDHSWIGMHNSWNGGANDNWLPAQ MUL_2799|M.ulcerans_Agy99 DPAGVTIPYRFDTTRGPLLNGACANDPGHQWIDMHRAFNNGANDNWLGAQ Mb1784c|M.bovis_AF2122/97 DATGVTMPYRFDTTRGPFLDGACVNDPDHSWVAMHESWNGGVNDNWLPAQ MMAR_4722|M.marinum_M DPASTTLPFRLDTTRPPLLNGACVNDPDHGWATLHDSWNGGANDNWLPAQ MAB_0555|M.abscessus_ATCC_1997 NPDGYLLPFHLDTAVNSVQK---IPTTSHAWSVQHDSWNHGKMDNWMAAH :. . :*:::**: .. ..* * * ::* * ***: *: Rv2350c|M.tuberculosis_H37Rv VPFSPLQGNVPVTMGFYTRRDLPIHYLLADTFTVCDGYFCSLLGGTTPNR MUL_2799|M.ulcerans_Agy99 AQAQTLQGNVPVTMGYYTRQDQPIHYLLADTFTICDGYHCSLIGGTSPNR Mb1784c|M.bovis_AF2122/97 AKTRSAA-HTPTVMGYYTRQDIPIHYLLADAFTVCDRYFCSVLGPTLPNR MMAR_4722|M.marinum_M ARTRSAA-NIPATLGYHTRDDLPIHFLLADTFTVCDHYFCSVIGPTFPNR MAB_0555|M.abscessus_ATCC_1997 RKADGEH--YPYVMGYYERADIPFHFALAEAFTVCDNFHSSVMGPTWPNR * .:*:: * * *:*: **::**:** :..*::* * *** Rv2350c|M.tuberculosis_H37Rv LYWMSAWIDPDGTDGGPVLIEPNIQPLQHYSWRIMPENLEDAGVSWKVYQ MUL_2799|M.ulcerans_Agy99 LYWMSAWVDPNGEQGGPLLVDPNIQPQGRFSWRTMPDNLSDAGISWKVYQ Mb1784c|M.bovis_AF2122/97 LYWLSATIDPDGQNGGPELQSPTFQPVRRFGWRIMPQNLSDAGVSWKVYR MMAR_4722|M.marinum_M LYWVSAWLDPDGANGGPLVETIPTPPIGKFSWPIMPQHLSDAGVSWKIYY MAB_0555|M.abscessus_ATCC_1997 MMWMTGTIDPDAAHGGPIIRNTPVS--GGYGWTTYAERLEAAGVSWRVYA : *::. :**:. .*** : :.* .:.*. **:**::* Rv2350c|M.tuberculosis_H37Rv NKLLGALNNTVVGYNGLVNDFKQAADPRSNLARFGISPTYPLDFAADVRN MUL_2799|M.ulcerans_Agy99 NKLLGALNNTVIGYDGMLNDFVQARDPRSNMARYGIAPTYPLDFVADVAS Mb1784c|M.bovis_AF2122/97 NKTLGPIS-SVLTYGSLVTSFKQSADPRSDLVRFGVAPSYPASFAADVLA MMAR_4722|M.marinum_M DKRLGPAVNSYVGYGEIVRWFTQAQDPRSDLVRFGATPRYPRDFATDVKA MAB_0555|M.abscessus_ATCC_1997 EE----DDYGGCNVLKLFSRFQRSR-PGEPLYDKGIAPVRATQFEDDARA :: :. * :: * . : * :* . .* *. Rv2350c|M.tuberculosis_H37Rv NRLPKVSWVLPGFLLSEHPAFPVN--VGAVAIVDALRILLSNPAVWEKTA MUL_2799|M.ulcerans_Agy99 NRLPQVSWVLPGFQVSEHPGVPVAPAVGGTAIVNILRILLSNPAVWEKTA Mb1784c|M.bovis_AF2122/97 NRLPRVSWVIPNVLESEHPAVPAA--AGAFAIVNILRILLANPAVWEKTA MMAR_4722|M.marinum_M NRLPQVSWLIPNFLESEHPAMPNAG--GAIAFMDVLRILLSNPAVWEKTA MAB_0555|M.abscessus_ATCC_1997 GRLPAVSWLIMTSTASEHPDYRPAD--GAAYIASKIDAIAANPEVWAKTV .*** ***:: **** *. : . : : :** ** **. Rv2350c|M.tuberculosis_H37Rv LIVNYDENGGFFDHVVPPTPPPGTPGEFVTVPDIDSVPGSGGIRGPIGLG MUL_2799|M.ulcerans_Agy99 LIVSFDENGGFFDHVTPTTAPEGTPGEWITVPDINAVTGSGGIRGPIGLG Mb1784c|M.bovis_AF2122/97 LIVSYDENGGFFDHVVPATAPAGTPGEYVTVPDIDQVPGSGGIRGPIGLG MMAR_4722|M.marinum_M LIVSYDENGGFFDHVVPPTPPDGTPGEYLTVPDIDKVRGSGGIRGPIGLG MAB_0555|M.abscessus_ATCC_1997 FILNYDENDGLFDHVVPPTPPPGTPGEWVKG-------------VPIGGG :*:.:***.*:****.*.*.* *****::. *** * Rv2350c|M.tuberculosis_H37Rv FRVPCLVISPYSRGPLMVHDTFDHTSTLKLIRARFGVPVPNLTAWRDATV MUL_2799|M.ulcerans_Agy99 YRVPCFVISPYSRGPLMVHDIFDHTSQLRLLEQRFGVPVPNLTTWRRGVT Mb1784c|M.bovis_AF2122/97 FRVPCFVISPYSRGPQMVHDTFDHTSQLRLLETRFGVPVPNLTAWRRSVT MMAR_4722|M.marinum_M YRVPGLVISPFSRGGLVAHDVFDHTSQLRLIETRFGVPVPNLTAWRRSVT MAB_0555|M.abscessus_ATCC_1997 FRVPAIVISPWSVGGWVAGESFDHTSVLRFLEEFTGVREPNISGWRRKTF :*** :****:* * :. : ***** *:::. ** **:: ** . Rv2350c|M.tuberculosis_H37Rv GDMTSTFNFAAPPNPSKPNLDHPRLNALPKLPQC-VPNAVLGTVTKTAIP MUL_2799|M.ulcerans_Agy99 GDMTSTFNFAVPPNASPPNLDHPALKAVPQQVQC-VPDTVT-VFTKTVPP Mb1784c|M.bovis_AF2122/97 GDMTSTFNFAVPPNSSWPNLDYPGLHALSTVPQC-VPNAALGTINR-GIP MMAR_4722|M.marinum_M GDMTSAFNFGVPPNPSRPNLNQ-SKRVLPQLAQCGLGVEAVAGIFELNPP MAB_0555|M.abscessus_ATCC_1997 GNLLSAFGFDSP------------VRPAPELPDTAAVVAAADRTDTRPPP *:: *:*.* * . . : . * Rv2350c|M.tuberculosis_H37Rv YRVPFPQSMPTQE-TAPTRGIPSGLC MUL_2799|M.ulcerans_Agy99 YRVPFPQVMPSQE-TSPTRGIPSGPC Mb1784c|M.bovis_AF2122/97 YRVPDPQIMPTQE-TTPTRGIPSGPC MMAR_4722|M.marinum_M YRVPYPQAMPAQE-TTPARGIPSGLC MAB_0555|M.abscessus_ATCC_1997 VIPPAPQTSPVQEPGSRPRRYPRR-- * ** * ** : .* *