For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv1512 (epiA)

annotation: probable nucleotide-sugar epimerase epiA
coordinates: 1704093 - 1705061
length: 322

MNAHTSVGPLDRAARVYIAGHRGLVGSALLRTFAGAGFTNLLVRSRAELDLTDRAATFDFVLESRPQVVI
DAAARVGGILANDTYPADFLSENLQIQVNLLDAAVAARVPRLLFLGSSCIYPKLAPQPIPESALLTGPLE
PTNDAYAIAKIAGILAVQAVRRQHGLPWISAMPTNLYGPGDNFSPSGSHLLPALIRRYDEAKASGAPNVT
NWGTGTPRRELLHVDDLASACLYLLEHFDGPTHVNVGTGIDHTIGEIAEMVASAVGYSGETRWDPSKPDG
TPRKLLDVSVLREAGWRPSIALRDGIEATVAWYREHAGTVRQ
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv1512epiA-100% (322)probable nucleotide-sugar epimerase epiA
M. tuberculosis H37RvRv3634cgalE13e-2229.38% (320) UDP-glucose 4-epimerase GALE1 (galactowaldenase)
M. tuberculosis H37RvRv3784-9e-1125.21% (234) dTDP-glucose 4,6-dehydratase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3658cgalE13e-2229.38% (320) UDP-glucose 4-epimerase GALE1 (galactowaldenase)
M. gilvum PYR-GCKMflv_4753-1e-12770.83% (312) NAD-dependent epimerase/dehydratase
M. leprae Br4923MLBr_00204rmlB24e-2027.50% (320) putative sugar-nucleotide dehydratase
M. abscessus ATCC 19977MAB_0503-2e-2028.12% (320) UDP-glucose 4-epimerase GalE1
M. marinum MMMAR_5133galE17e-2227.91% (326) UDP-glucose 4-epimerase GalE1
M. avium 104MAV_0524-2e-2128.44% (320) nucleoside-diphosphate-sugar epimerase
M. smegmatis MC2 155MSMEG_5956-2e-2931.10% (328) NAD dependent epimerase/dehydratase family protein
M. thermoresistible (build 8)TH_2143-6e-0625.37% (272) POSSIBLE OXIDOREDUCTASE
M. ulcerans Agy99MUL_4210galE15e-2227.91% (326) UDP-glucose 4-epimerase GalE1
M. vanbaalenii PYR-1Mvan_1365-8e-0725.00% (332) dTDP-glucose 4,6-dehydratase

CLUSTAL 2.0.9 multiple sequence alignment


Rv1512|M.tuberculosis_H37Rv         -------MNAHTSVGP--LDRAARVYIAGHRGLVGSALLRTFAGAGFTNL
Mflv_4753|M.gilvum_PYR-GCK          -------MTASEIVSPRELDRAATFYVAGHRGLVGSAIVRRLRVAGFDNI
MLBr_00204|M.leprae_Br4923          MYGEPVRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFATGHAANLEHL
MAV_0524|M.avium_104                -----MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFASGRASNLEHL
MMAR_5133|M.marinum_M               -----MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFATGRATNLEHL
MUL_4210|M.ulcerans_Agy99           -----MRALVTGAAGFIGSTLVDRLLADGHT-VVGLDNFATGRATNLEHL
Mb3658c|M.bovis_AF2122/97           -----MRALVTGAAGFIGSTLVDRLLADGHS-VVGLDNFATGRATNLEHL
MAB_0503|M.abscessus_ATCC_1997      -----MRAMVTGAAGFIGSTLVDRLLADGHE-VTGLDNLATGKVANLEAA
MSMEG_5956|M.smegmatis_MC2_155      ----MSRILVTGGVGTIGSAVVRRLLHESAYEIRVCD--QRPAPQWMNEA
Mvan_1365|M.vanbaalenii_PYR-1       -----MRLLVTGGAGFIGANFVRTTVQQRPDVQVTVLDSLTYAGSRESLR
TH_2143|M.thermoresistible__bu      ---VAKKKLVIGASGFLGSHVTRQLVREGHDVRVMVRTTSMTRG------
                                             .    .      .                            

Rv1512|M.tuberculosis_H37Rv         LVRSRAELDLTD--RAATFDFVLESRPQVVIDAAARVGGILANDTYPADF
Mflv_4753|M.gilvum_PYR-GCK          VGKTSAELDLKN--RDAVFDFMSEIKPRYVVLAAAKVGGILANSNYPVDF
MLBr_00204|M.leprae_Br4923          ASTPALAFVEADIVTADLQTILDEHRPEVVFHLAAQID-VRHSVVDPQFD
MAV_0524|M.avium_104                VGNPAHVFVEADIVTADLEAILDEHRPEVVFHLAAQID-VRHSVADPQFD
MMAR_5133|M.marinum_M               VDNLAHVFVEADIVDADLQAIFEQHRPEVIFHLAAQID-VRHSVADPQFD
MUL_4210|M.ulcerans_Agy99           VDNLAHVFVEADIVDADLQAIFEQHRPEVIFHLAAQID-VRHSVADPQFD
Mb3658c|M.bovis_AF2122/97           ADNSAHVFVEADIVTADLHAILEQHRPEVVFHLAAQID-VRRSVADPQFD
MAB_0503|M.abscessus_ATCC_1997      EANAKFTFVKDDIVEADLDAVVAEYSPEVIFHLAAQID-VRHSVADPQFD
MSMEG_5956|M.smegmatis_MC2_155      CEIRTGDLRSADEARAAVDGCTH------VIHLAAIVGGIANFHRLPHTL
Mvan_1365|M.vanbaalenii_PYR-1       GVDSQIRLVEGDITDAELVGKLVADS-DAVVHFAAETH-VDNALADPEPF
TH_2143|M.thermoresistible__bu      IDDLDVERCHGDVFDDAALRAAMTGVDDVYYCVVDAR----MWLRDPAPL
                                               :                     .            *   

Rv1512|M.tuberculosis_H37Rv         LSENLQIQVNLLDAAVAARVPR--LLFLGSS-CIYPKLAPQP--IPESAL
Mflv_4753|M.gilvum_PYR-GCK          LSDNIRIQVNVLDAARDCGVER--LLFLGSS-CIYPKFAEQP--IREDSL
MLBr_00204|M.leprae_Br4923          ASVNVIGTVRLAEAARHTGVRK--IVHTSSGGSIYGTPSQYP--TPET-V
MAV_0524|M.avium_104                ASVNVIGTVRLAEAARRTGVRK--IVHTSSGGSIYGTPPTYP--TPET-V
MMAR_5133|M.marinum_M               ASVNVIGTLRLAEAARLTGVRK--VVHTSSGGSIYGTPPQYP--TSER-V
MUL_4210|M.ulcerans_Agy99           ASVNVIGTLRLAEAARLTGVRK--VVHTSSGGSIYGTPPQYP--TSER-V
Mb3658c|M.bovis_AF2122/97           AAVNVIGTVRLAEAARQTGVRK--IVHTSSGGSIYGTPPEYP--TPET-A
MAB_0503|M.abscessus_ATCC_1997      SSVNVVGTVRLAEAARKAGVRK--IVHTSSGGSIYGTPKQIP--TSET-V
MSMEG_5956|M.smegmatis_MC2_155      LEMNTGLYNSVFSAALREGVER--LVYVSSS-MVFEQATQFP--TTEEHL
Mvan_1365|M.vanbaalenii_PYR-1       VHSNVLGTFTVLEAVRHASVTKPVRLHHISTDEVYGDLELDDPARFTDAT
TH_2143|M.thermoresistible__bu      FRTNVEGLRHVLDAAVEADLNR--FLFTSTT----GTMAINPYRPVTEDD
                                       *      : .*.    : :   :.  :                    

Rv1512|M.tuberculosis_H37Rv         LTGPLEPTNDAYAIAKIAGILAVQAVRRQHGLPWISAMPTNLYGPGDNFS
Mflv_4753|M.gilvum_PYR-GCK          LTGHLEPTNDAYAIAKIAGILHVQAVRRQYGLPWISAMPTNLYGPNDNYS
MLBr_00204|M.leprae_Br4923          PTDPTSP----YAAGKVAGEIYLNTFRHLCGLDCSHIAPANVYGPRQ--D
MAV_0524|M.avium_104                PTDPASP----YAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQ--D
MMAR_5133|M.marinum_M               PTDPASP----YAAGKVAGEIYLNTFRHLYGLECSHIAPANVYGPRQ--D
MUL_4210|M.ulcerans_Agy99           PTDPASP----YAAGKVAGEIYLNTFRHLYGLECSHIAPANVYGPRQ--D
Mb3658c|M.bovis_AF2122/97           PTDPASP----YAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQ--D
MAB_0503|M.abscessus_ATCC_1997      PTDPHSP----YAAGKVAGEIYLNTFRHLYGLECSHIAPANVYGPRQ--D
MSMEG_5956|M.smegmatis_MC2_155      LDCRPPRS--AYGFSKLTGEIYCRAVHEEHGLPFTICRPFNAYGPGE--L
Mvan_1365|M.vanbaalenii_PYR-1       PYNPSSP----YSSTKAAADMLVRAWVRSYRVAATISNCSNNYGPYQH--
TH_2143|M.thermoresistible__bu      PHNWTEGG--AYIEARVAAEQLVLRYARERGLPAVALCISTTYGPGD-WQ
                                               *   : :.        .   :        . *** :   

Rv1512|M.tuberculosis_H37Rv         PSGSHLLPALIRRYDEAKASGAPNVTNWGTGTPRRELLHVDD--------
Mflv_4753|M.gilvum_PYR-GCK          PTGSHVLPALIRRYDEAVASRAVSVTNWGTGSPRREFLHSDD--------
MLBr_00204|M.leprae_Br4923          PYG---EAGVVAIFVQALLSDRP-TKVFGDGTHTRDYVFVDD--------
MAV_0524|M.avium_104                PHG---EAGVVAIFAQALLSGKP-TKVFGDGTNTRDYVFVDD--------
MMAR_5133|M.marinum_M               PHG---EAGVVAIFAQALLSGKP-TKVFGDGTNTRDYVFVDD--------
MUL_4210|M.ulcerans_Agy99           PHG---EAGVVAIFAQALLSGKP-TKVFGDGTNTRDYVFVDD--------
Mb3658c|M.bovis_AF2122/97           PHG---EAGVVAIFAQALLSGKP-TRVFGDGTNTRDYVFVDD--------
MAB_0503|M.abscessus_ATCC_1997      PHG---EAGVVAIFAQALLSGRS-TKVFGDGGNTRDYVFVDD--------
MSMEG_5956|M.smegmatis_MC2_155      PDTEPGIAHAVPDLIRKALSGQHPLQIFGSGTQTRTLTHVDD--------
Mvan_1365|M.vanbaalenii_PYR-1       ------VEKFIPRQITNVLTGRR-PELYGTGANVRDWIHVDD--------
TH_2143|M.thermoresistible__bu      PTPHGRLLAMVATGRFPFYLGWS-AEVVGIEDAARAMLLAAEQGRVGERY
                                              :                 *     *      :        

Rv1512|M.tuberculosis_H37Rv         -LASACLYLLEHFDGPTH-VNVGTGIDHTIGEIAEMVASAVGYSGE---T
Mflv_4753|M.gilvum_PYR-GCK          -MADACLHLLENYDGPEQ-VNVGSGTDVTIREIAESVAAAVGFSGE---T
MLBr_00204|M.leprae_Br4923          -VVDAFIKASGDAGGGQR-FNIGTGIETSDRQLHTAVSAAVGGPDD---P
MAV_0524|M.avium_104                -VVDAFVKASGDAGGGQR-FNIGTGVETSDRQLHSAVAAAVGGPDD---P
MMAR_5133|M.marinum_M               -VVDAFVRAGSDVGGGQR-FNIGTGVETSDRQLHSAVAAAVGGPDD---P
MUL_4210|M.ulcerans_Agy99           -VVDAFVKAGSDVGGGQR-FNIGTGVETSDRQLHSAVAAAVGGPDD---P
Mb3658c|M.bovis_AF2122/97           -VVDAFVRVSADVGGGLR-FNIGTGKETSDRQLHSAVAAAVGGPDD---P
MAB_0503|M.abscessus_ATCC_1997      -VVEAFVRASGPDGGGQR-FNVGTGVETSDRQLHSLVAAAAGAPDD---P
MSMEG_5956|M.smegmatis_MC2_155      -IADGIVTAMFHPAGENQDFNISASEEHTIAEIAQMIWTACGLDPEDFAL
Mvan_1365|M.vanbaalenii_PYR-1       -HNSAVWRILHDGTVGRT-YLIGADGERDNLSVMRTILRLMGRSPED--F
TH_2143|M.thermoresistible__bu      IISDRYLHTREVHAIAAEAVGRRAPWFGLPLPVLSVAARGNDLAARLLRR
                                       .                   :        :        .        

Rv1512|M.tuberculosis_H37Rv         RWDPSKP---DGTPRKLLDVSVLR-EAGWRPS-IALRDGIEATVAWYREH
Mflv_4753|M.gilvum_PYR-GCK          HWDTTKP---DGTPQKLLDVSKLT-QAGWTSK-ISLQEGIERTVAWYREH
MLBr_00204|M.leprae_Br4923          EFHPPRL---GDLKRSCLDIGLATTVLGWSPQ-VQLDDGVRRTVEYFRAA
MAV_0524|M.avium_104                EFHPPRL---GDLKRSCLDIGLAARVLGWQPK-VGLQQGVARTVEYFRNQ
MMAR_5133|M.marinum_M               EFHPPRL---GDLKRSCLDISRAEEVLGWRPQ-VELADGVRRTVDYFRRT
MUL_4210|M.ulcerans_Agy99           EFHPPRL---GDLKRSCLDISRAEEVLGWRPQ-VELADGVRRTVDYFRRT
Mb3658c|M.bovis_AF2122/97           EFHPPRL---GDLKRSCLDIGLAERVLGWRPQ-IELADGVRRTVEYFRHK
MAB_0503|M.abscessus_ATCC_1997      EFHPPRL---GDLRQSCLDVGLAKRVLGWEPR-VPLADGIRRTVDFFRS-
MSMEG_5956|M.smegmatis_MC2_155      ENVPTFE---VDVQRRWPSVEKARMLLGWQAR-VDLRDGIATTVEWLREQ
Mvan_1365|M.vanbaalenii_PYR-1       DHVTDRV---GHDLRYAIDPTPLRDELGWRPEHTDFESGLRDTIDWYRDN
TH_2143|M.thermoresistible__bu      DLMFAHVGLKMAELMSPLDHSKAERELGFKPE--PVEDSIAKAARFFLEQ
                                                      .        *: .    . ..:  :  :    

Rv1512|M.tuberculosis_H37Rv         AGTVRQ--------------
Mflv_4753|M.gilvum_PYR-GCK          VGALRG--------------
MLBr_00204|M.leprae_Br4923          QRS-----------------
MAV_0524|M.avium_104                HN------------------
MMAR_5133|M.marinum_M               HGS-----------------
MUL_4210|M.ulcerans_Agy99           HGS-----------------
Mb3658c|M.bovis_AF2122/97           HTD-----------------
MAB_0503|M.abscessus_ATCC_1997      --------------------
MSMEG_5956|M.smegmatis_MC2_155      QCIARNS-------------
Mvan_1365|M.vanbaalenii_PYR-1       ESWWGPLKDAVEATYQRRRR
TH_2143|M.thermoresistible__bu      HR------------------