For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNVSAESGAPRRAGQRHEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIP RVYQKSRITTRRMAVDPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVL ATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAV FADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSEN LPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSV SLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv1372 | - | - | 100% (393) | hypothetical protein Rv1372 |
M. tuberculosis H37Rv | Rv1665 | pks11 | 3e-34 | 28.89% (360) | chalcone synthase |
M. tuberculosis H37Rv | Rv1660 | pks10 | 8e-30 | 26.89% (357) | chalcone synthase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1406 | - | 0.0 | 100.00% (393) | hypothetical protein Mb1406 |
M. gilvum PYR-GCK | Mflv_5140 | - | 1e-35 | 28.81% (361) | chalcone/stilbene synthase domain-containing protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1141c | - | 5e-08 | 27.00% (200) | 3-oxoacyl-(acyl carrier protein) synthase III |
M. marinum M | MMAR_2190 | - | 1e-174 | 79.90% (393) | chalcone/stilbene synthase |
M. avium 104 | MAV_3105 | - | 1e-30 | 26.61% (357) | Pks11 protein |
M. smegmatis MC2 155 | MSMEG_0808 | - | 3e-37 | 29.20% (363) | chalcone synthase Pks10 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1775 | - | 1e-173 | 79.39% (393) | chalcone/stilbene synthase |
M. vanbaalenii PYR-1 | Mvan_1196 | - | 3e-31 | 27.02% (359) | chalcone/stilbene synthase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Rv1372|M.tuberculosis_H37Rv MNVSAESGAPRRAGQRHEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQS Mb1406|M.bovis_AF2122/97 MNVSAESGAPRRAGQRHEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQS MMAR_2190|M.marinum_M MSTAAEGGAIRRAGHEPRYDLAQLPPAPPTTVAVIEGMATGAPQRVVAQA MUL_1775|M.ulcerans_Agy99 MSTAAEGGAICRAGHEPRYDLAQLPPAPPTTVAVIEGMATGAPQRVVAQA Mflv_5140|M.gilvum_PYR-GCK ------------------------MTDVHTPVSVIAGVQGALPPHRYSQA Mvan_1196|M.vanbaalenii_PYR-1 ---------------------------MNDRISVIAGVQGALPPYRYSQA MAV_3105|M.avium_104 -------------------------------MSVIAGVFGAVPPHRYSQR MSMEG_0808|M.smegmatis_MC2_155 ---------------------MENTAFTPSGTCTIAGVHGVLPPHRYTQA MAB_1141c|M.abscessus_ATCC_199 ----------------------------MTDIAEITGIN-KIGLLSLGAY . * *: Rv1372|M.tuberculosis_H37Rv DAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPA Mb1406|M.bovis_AF2122/97 DAADRVAELFLDPGQRERIPRVYQKSRITTRRMAVDPLDAKFDVFRREPA MMAR_2190|M.marinum_M DAAARVSELFVDPQQRERISRIYDKTRIDTRRMAVDPLDDEFDEFRREPA MUL_1775|M.ulcerans_Agy99 DAAARVSELFVDPQQRERISRIYDKTRIDTRRMAVDPLDDEFDEFRREPA Mflv_5140|M.gilvum_PYR-GCK EVTDAFLAAPAFAEVGDLLRSLHTNAKVDARHLVLP------LEQYPDLL Mvan_1196|M.vanbaalenii_PYR-1 EITERFVAVPAFAELEDVVRGLHKHAKVDARHFVLP------MDRYPTLV MAV_3105|M.avium_104 EITDEIVKFPALREHEEVVRRLHAAAKVNSRHFVLP------LQQYHSLT MSMEG_0808|M.smegmatis_MC2_155 EVTEALLDLPGYADFEGIVRSLHKSAKVNSRYLTLP------LEEYAALD MAB_1141c|M.abscessus_ATCC_199 RPERVVTNDEICERIESSDEWIYTRTGIKTRRFAAD-------------- . :: : : :* :. Rv1372|M.tuberculosis_H37Rv TIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPG Mb1406|M.bovis_AF2122/97 TIRDRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPG MMAR_2190|M.marinum_M TIRDRMNLFYQHAVPLAVDVAARALDGLPYAPDEIGQLVFVTSTGFIAPG MUL_1775|M.ulcerans_Agy99 TIRDRMNLFYQHAVPLAVDVAARALDGLPYAPDEIGQLVFVTSTGFIAPG Mflv_5140|M.gilvum_PYR-GCK DFGDANDLYIHHAVELGCQALTAALDEAGLAPSDLDVIMSTTVTGIAVPS Mvan_1196|M.vanbaalenii_PYR-1 DFGETNDLYLEHSLDLACEALTAALDEAGLGPRDLDMIMTTTVTGIAVPS MAV_3105|M.avium_104 DFGEVNEIFIDKAVQIGCDALLGALDEAGLRPQDIDMIATTTVTGVAVPS MSMEG_0808|M.smegmatis_MC2_155 DFGETNGLFIEHATELGCAALTGALDEAGLRPEDVDLIITTTVTGAVVPS MAB_1141c|M.abscessus_ATCC_199 ---------EETAQTLAIEAGRKAIANALLTGAEIDAVIVATSTHYLQTP . : :. . *: ::. : .* * . Rv1372|M.tuberculosis_H37Rv VDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVV Mb1406|M.bovis_AF2122/97 VDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVV MMAR_2190|M.marinum_M VDVEIVKQLGLPRSISRVVVNFMGCAAAMNAIRTATNYVRAHPSMKALVV MUL_1775|M.ulcerans_Agy99 VDVEIVKQLGLPRSISRVVVNFMGCAAAMNAIRTATNYVRAHPSMKALVV Mflv_5140|M.gilvum_PYR-GCK LDARIAAKLGLRPDVRRVPLFGLGCVAGAAGIARMHDYLRGAPGHVAALI Mvan_1196|M.vanbaalenii_PYR-1 LDARIADRLGLRPDVRRVPLFGLGCVAGAAGIARMHDYLRGAPDHIAALV MAV_3105|M.avium_104 LDARIAGRLGLRPDVRRVPLFGLGCAAGAAGVGRLHDYLRGAPDGVAALV MSMEG_0808|M.smegmatis_MC2_155 LDARIAGRVGLRPDVRRVPIFGLGCVAGAAGVARLNDYLRGAPDKVAVLV MAB_1141c|M.abscessus_ATCC_199 ASAPAVATALGAQGVPAFDLS-AGCAGFGYAVGVAGDMIRGGSASKVLVI .. . .: . : **.. .: : :*. . . :: Rv1372|M.tuberculosis_H37Rv CIELCSVNA-VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVV Mb1406|M.bovis_AF2122/97 CIELCSVNA-VFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGKVVV MMAR_2190|M.marinum_M CIELSSVNA-VFADDINDVVIHSLFGDGCGALVIGASQVQQPLPAGNVVI MUL_1775|M.ulcerans_Agy99 CIELSSVNA-VFADDINDVVIHSLFGDGCGALVIGASQAQQPLPAGNVVI Mflv_5140|M.gilvum_PYR-GCK SVELCSLTRPALAPTIGSLVGSALFGDGAAAVVAVGEERAGHIRASGPDV Mvan_1196|M.vanbaalenii_PYR-1 SVELCSLTYPAVEPTMASLVGSALFGDGAAAVIAVGAERAETIGATGPEV MAV_3105|M.avium_104 SVELCSLTFPTVKPTVSGLVGTAMFGDGAAAVVAVGDRRAERLGATGPDI MSMEG_0808|M.smegmatis_MC2_155 SVELCSLTH-KHTPSMPTLVAGALFGDGASAVVAVGAGRAEQLDPIGPDV MAB_1141c|M.abscessus_ATCC_199 GSEKLSPAL-----DMTDRGNCFIFGDGAGAVVVG-ETAEQGIGPTVWGS * * : :****..*:: : . Rv1372|M.tuberculosis_H37Rv RSSFSQLLDNTEDGIVLGVNHNG-----ITCELSENLPGYIFSGVAPVVT Mb1406|M.bovis_AF2122/97 RSSFSQLLDNTEDGIVLGVNHNG-----ITCELSENLPGYIFSGVAPVVT MMAR_2190|M.marinum_M RSSFSQLLDDSEDGIVLGVNHDG-----ITCELSENLPSYIYRSVDPVVA MUL_1775|M.ulcerans_Agy99 RSSFSQLLDDSEDGIVLGVNHDG-----ITCELSENLPSYIYRSVDPVVA Mflv_5140|M.gilvum_PYR-GCK LDSRSRMYPDSLDIMGWSVNHNG-----FQLVLSPELPALIERYLPDDMA Mvan_1196|M.vanbaalenii_PYR-1 LDTRSRMYPDSLDTMGWRVGASG-----FQLILSPNLPELIERYLADDMA MAV_3105|M.avium_104 LDSRSRLYPETLHIMGWNIGSAG-----MQLVMSPELPAVVEKHLADDVT MSMEG_0808|M.smegmatis_MC2_155 LDSRSHLYPDSLHAMGWDIGTKG-----FEIVLSAEVPGFVGRYLGDDVT MAB_1141c|M.abscessus_ATCC_199 DGSQSNAIRQDIDWMDFAAAPDPEGPRPYLRIEGTSVFRWAAFEMGKVGQ .: *. : . : . .: : Rv1372|M.tuberculosis_H37Rv EMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARF Mb1406|M.bovis_AF2122/97 EMLWDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARF MMAR_2190|M.marinum_M EMLRDNGLSKADIDLWAIHPGGPKIIEQSARSLGIPVGRAVQSWDVLAQF MUL_1775|M.ulcerans_Agy99 EMLRDNGLSKADIDLWAIHPGGPKIIEQSARSLGIPVGRAVQSWDVLAQF Mflv_5140|M.gilvum_PYR-GCK SFLGEHDLGIGDIATWVSHPGGPKVLEAIASALDLPDDALELSWRSLAEI Mvan_1196|M.vanbaalenii_PYR-1 GFLGAHDLQIGDIAAWVSHPGGPKVMEAISETLGLPDDALDLAWRSLAEV MAV_3105|M.avium_104 GFLAAHGLTTGDVGAWITHPAGPKVITAIAATLDLPAEAHELTWRSLGEV MSMEG_0808|M.smegmatis_MC2_155 EFLGEHGVATDDVSAWVSHPGGPKVIEAIIETLDLPSDALDLTWQSLAEV MAB_1141c|M.abscessus_ATCC_199 RAMEAAKVGPEQIDVFVPHQANTRINELLAKNLHLRADAVIAN--DIEHT : : :: : * ...:: * : : . Rv1372|M.tuberculosis_H37Rv GNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR- Mb1406|M.bovis_AF2122/97 GNMLSVSLIFVLETMVQQAESAKAISTGVAFAFGPGVTVEGMLFDIIRR- MMAR_2190|M.marinum_M GNMLSVSLIFVLEMMVAQAESDKPISTGVAFAFAPGVTVEGMLFDIIRR- MUL_1775|M.ulcerans_Agy99 GNMLSVSLIFVLEMMVAQAESDKPISTGVAFAFAPGVTVEGMLFDIIRR- Mflv_5140|M.gilvum_PYR-GCK GNLSSSSVLHILRDTIAKKPPAA--TPGLLMAMGPGFCSELVLLRWH--- Mvan_1196|M.vanbaalenii_PYR-1 GNLSSSSVLHVLRDTRAKKPPAG--TPGLLMAMGPGFCSELVLLRWR--- MAV_3105|M.avium_104 ANLSSASVLHILRDTIAKPPPAG--SPALMLAVGPGFGSELVLLRWH--- MSMEG_0808|M.smegmatis_MC2_155 GNLSSSSVLHVLRDTIRKRPPAG--TPGVLMAMGPGFCSELVLLRWR--- MAB_1141c|M.abscessus_ATCC_199 GNTSAASVPLAMETLLSTG-AAKPGDLALLIGYGAGLSYAAQVVRMPPVP .* : *: :. . .: :. ..*. :. Rv1372|M.tuberculosis_H37Rv -- Mb1406|M.bovis_AF2122/97 -- MMAR_2190|M.marinum_M -- MUL_1775|M.ulcerans_Agy99 -- Mflv_5140|M.gilvum_PYR-GCK -- Mvan_1196|M.vanbaalenii_PYR-1 -- MAV_3105|M.avium_104 -- MSMEG_0808|M.smegmatis_MC2_155 -- MAB_1141c|M.abscessus_ATCC_199 FE