For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_4979 (-)

annotation: cytochrome P450
coordinates: 5323939 - 5325159
length: 406

VTRTPERHAENWDLRHPDFNDNDFLYDVYAVMRAKSPFARTDNPFLSATPAGAWVAVRYAECVQILQDWE
HFSSNPTPEGAEQLAGDLVITLDPPRQQKFRKVLNPYFSPARMKALRPEIGVETDRLIDDFIETGSGDLA
AVAWRQPGIVFFKYLLGMPVDDVPLCVELTDTALNGATEQDRMAAWGGLYQHLHDAVTARRGQPPRDDMI
DVLLSAEIDGEKLAFADVVSNAMLLVQAGLETTASAMSFAYHYLATNPAERDRLIDDPDLLTRAVEEFIR
FAGSIHGIPRTVAREVELSGCTFSPGESVIVNYAAANRDEQEFPDAHRCILDRRDNRHLGFGAGVHRCLG
SNLARLEFQVGLERVLTRMPDFALSPTSKAEFHGNSVTRGFRSVPVVFTPGKRVTA
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_4979--100% (406)cytochrome P450
M. vanbaalenii PYR-1Mvan_4880-8e-4830.66% (424) cytochrome P450
M. vanbaalenii PYR-1Mvan_4160-5e-4431.99% (397) cytochrome P450

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2289cyp1242e-3629.36% (419) cytochrome P450 124 CYP124
M. gilvum PYR-GCKMflv_1768-0.088.59% (403) cytochrome P450
M. tuberculosis H37RvRv3518ccyp1421e-3830.25% (400) cytochrome P450 monooxygenase 142
M. leprae Br4923MLBr_02088-8e-3530.28% (317) putative cytochrome p450
M. abscessus ATCC 19977MAB_1406c-4e-4030.14% (365) cytochrome P450
M. marinum MMMAR_4717cyp188A32e-4732.54% (378) cytochrome P450 188A3 Cyp188A3
M. avium 104MAV_2213-2e-4831.22% (378) cytochrome P450 superfamily protein
M. smegmatis MC2 155MSMEG_4803-3e-4332.82% (323) cytochrome P450 superfamily protein
M. thermoresistible (build 8)TH_3303-7e-6134.06% (414) PUTATIVE putative cytochrome P450 superfamily protein
M. ulcerans Agy99MUL_3863cyp108B41e-4129.25% (400) cytochrome P450 108B4 Cyp108B4

CLUSTAL 2.0.9 multiple sequence alignment


Mb2289|M.bovis_AF2122/97            MGLNTAIATRVNGTPPPEVPIADIELGSLDFWALDDDVRDGAFATLRREA
MUL_3863|M.ulcerans_Agy99           ---------------MSAPTMDEAALLADPLAYTDETRLHAALTRLRAQA
Rv3518c|M.tuberculosis_H37Rv        -----------------MTEAPDVDLADGNFYASREAR--AAYRWMRANQ
MAB_1406c|M.abscessus_ATCC_199      ---------------MSVDVSHTVAPRYVPGTADNWTNPWPMYAALRDHD
MAV_2213|M.avium_104                ---------------------MTEAGGFVDQTVTGVAEPQPMYKALRESN
Mvan_4979|M.vanbaalenii_PYR-1       --------------MTRTPERHAENWDLRHPDFNDNDFLYDVYAVMRAKS
Mflv_1768|M.gilvum_PYR-GCK          --------------MSPTVEQHAENWDLRHADFNDPDFLYDVYTVMRGNS
MMAR_4717|M.marinum_M               --------------MSVDDVVSDSDHQKNRYQFDRHSPEYRSQFKAITEE
MSMEG_4803|M.smegmatis_MC2_155      --------------MSIQDVTTDDDREKITYHFDRHTPEYRLQFEKITEE
TH_3303|M.thermoresistible__bu      --------------MTTFDTRP-------TVDFDHHSPEYAQNSAAINAE
MLBr_02088|M.leprae_Br4923          -------MRTCVPTRTCVYAFIEYLSHNRPMGTNPPSLVEAQMLLLRLID
                                                                                      

Mb2289|M.bovis_AF2122/97            P--------ISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYP
MUL_3863|M.ulcerans_Agy99           P--------VALVDVPNYR------RFWAITRHADVMDIERDNTLFTNWP
Rv3518c|M.tuberculosis_H37Rv        P--------VFRDRN----------GLAAASTYQAVIDAERQPELFS---
MAB_1406c|M.abscessus_ATCC_199      P--------VHHVVPEYTPD----QDYYVLTRHADVYEAARDWETFSSAR
MAV_2213|M.avium_104                P--------VFRSP-----------QAVVLSRLADIEMALKHTELFSSN-
Mvan_4979|M.vanbaalenii_PYR-1       P--------FARTDNPFLSATPA--GAWVAVRYAECVQILQDWEHFSSNP
Mflv_1768|M.gilvum_PYR-GCK          P--------FARTDNPFLSATPS--GAWVAVRYAECVQILQDWEHFSSSP
MMAR_4717|M.marinum_M               M--------HTTCP-MAWSDTYG--GHWVAAGSHEVFELARCP-AVSNDH
MSMEG_4803|M.smegmatis_MC2_155      M--------HSRCP-VAWTETYD--GHWVAAGSNEVFELARCP-VVSNHH
TH_3303|M.thermoresistible__bu      L--------RAKCP-VAHTDAHG--GFWVISRYDDVVAAAKNDEVFASGY
MLBr_02088|M.leprae_Br4923          PGTRADPFPVYRALIDYGPMQLPGMPLTVFSSFSDCDEALRHPLSASDRL
                                                                .           :     :   

Mb2289|M.bovis_AF2122/97            N----IT-----INDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKV
MUL_3863|M.ulcerans_Agy99           RP-VLAT-----VAGDELQAAAGVRTLIHLDDPQHRVARAIGADWFRPKA
Rv3518c|M.tuberculosis_H37Rv        ------------NAGGIRPDQPALPMMIDMDDPAHLLRRKLVNAGFTRKR
MAB_1406c|M.abscessus_ATCC_199      GLTVTYG-----DLEKTGMGDNPPMVMQ--DPPTHTEFRKLVSRGFTPRQ
MAV_2213|M.avium_104                -------------MDAVDLGNVRPLIPLQIDPPEHAKYRRILDPLFTPRE
Mvan_4979|M.vanbaalenii_PYR-1       TPEGAEQ--------------LAGDLVITLDPPRQQKFRKVLNPYFSPAR
Mflv_1768|M.gilvum_PYR-GCK          TPEGAEQ--------------LAGDLVITLDPPRQQKFRKVLNPYFSPAR
MMAR_4717|M.marinum_M               DVNNQRRGYKGISIPTASRINGVRGGILEMDDPEHRIYRTVLNPYLSPAA
MSMEG_4803|M.smegmatis_MC2_155      DISGETP-FQGITIPKASRATVVRGGILEMDEPEHSAYRGALNPYLSPAA
TH_3303|M.thermoresistible__bu      TVNGVSP--LGVTIPPSP----VPMCPIEMDPPEYLPYRKLLNPFFSPGE
MLBr_02088|M.leprae_Br4923          KATLAQQ----AIAAGAEPRPFYASSFMFLDPPDHTRLRKLVSKAFAPKV
                                                                  * *     *      :    

Mb2289|M.bovis_AF2122/97            VARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIP
MUL_3863|M.ulcerans_Agy99           MRALKVRVDELAKNYVDAMMAAGP--ECDFVQQIAVNYPLYVIMSLLGLP
Rv3518c|M.tuberculosis_H37Rv        VKDKEASIAALCDTLIDAVCERGE---CDFVRDLAAPLPMAVIGDMLGVR
MAB_1406c|M.abscessus_ATCC_199      VTAVEPKVREFVVQRLERLKERGE---GDIVVELFKPLPSMVVAHYLGVP
MAV_2213|M.avium_104                MARREPLVTELVNEMIDRFAARGE---CDFHAEFAVPLPCTVFLQLLGLP
Mvan_4979|M.vanbaalenii_PYR-1       MKALRPEIGVETDRLIDDFIETGS---GDLAAVAWRQPGIVFFKYLLGMP
Mflv_1768|M.gilvum_PYR-GCK          MKALRHEIAAETDDLIDVFIESGS---GDLAEVAWRQPGIVFFKYLLGMP
MMAR_4717|M.marinum_M               VKRWEPFIDEVTRACLDERIEQGS---IDFVDDLANIVPAVLTLAILGIP
MSMEG_4803|M.smegmatis_MC2_155      IKRWEPFVDEITRAAIDEHISSGR---IDFVEHLANVVPAVFTLAMMGIE
TH_3303|M.thermoresistible__bu      SKKWEPRIAHWVDVCLDQVIEKGS---FDLVDDLANPVPSLFTCEFLGLP
MLBr_02088|M.leprae_Br4923          VQALEGDIAALVDSLLDKGAAAGQ---FDVIADLAFPLAVAVICRLLGVP
                                        .  :       :.     .     *.           .    :*: 

Mb2289|M.bovis_AF2122/97            KADHQRIFHWTNVILGFG-DPDLAT-----DFDEFMQVSADIGAYATALA
MUL_3863|M.ulcerans_Agy99           EADFPRMLKLTQELFGSD-DSEFKRG---STSEDQLPALLDMFGYFNAVT
Rv3518c|M.tuberculosis_H37Rv        PEQRDMFLRWSDDLVTFL-SSHVSQ----EDFQITMDAFAAYNDFTRATI
MAB_1406c|M.abscessus_ATCC_199      EEDRTQFDAWTDGIVAAASGGAIDIE---AMQGEVAQTIGELMMYFTGLI
MAV_2213|M.avium_104                LEDLDRFLLWKDGVIRPAGDSGFDRR---HES--SAGVAQQIYEYFDKAI
Mvan_4979|M.vanbaalenii_PYR-1       VDDVPLCVELTDTALNGATE------------QDRMAAWGGLYQHLHDAV
Mflv_1768|M.gilvum_PYR-GCK          VDDVPLCVELTDTALNGATE------------EARMGAWGGLYQHLHDAV
MMAR_4717|M.marinum_M               LEKWNLYSEPVHAAVYTPEHS--------PDIQRVTEMHRQMGLDMVTNM
MSMEG_4803|M.smegmatis_MC2_155      LKKWNVYSEPTHASVYTPEHA--------PEREKINEQHREMGIDLINNM
TH_3303|M.thermoresistible__bu      IEKWNDFASVQHEIIYTPPE----------EQEDILRRYMELCGEVFQLI
MLBr_02088|M.leprae_Br4923          YEDAPEFGRVSALLVQSVDPFITITGEPPEATEERLRAGVWLRDYLEQLV
                                      .           .                                   

Mb2289|M.bovis_AF2122/97            EDRRVNHH-DDLTSSLVEAEVDGE--RLSSREIASFFILLVVAGNETTRN
MUL_3863|M.ulcerans_Agy99           TARRAHPT-ADLASAIANARIDGE--PLSDIDTVSYYLIVATAGHDTTSA
Rv3518c|M.tuberculosis_H37Rv        AARRADPT-DDLVSVLVSSEVDGE--RLSDDELVMETLLILIGGDETTRH
MAB_1406c|M.abscessus_ATCC_199      ERRRAEPE-DDTVSHLVAAGVGADGDISGTLQILGFAFTMVTGGNDTTTG
MAV_2213|M.avium_104                DEHIAVPR-DDVLSAMIAADVGGQ--PLSREELLDICFLFLIAGLDTVTD
Mvan_4979|M.vanbaalenii_PYR-1       TARRGQPPRDDMIDVLLSAEIDGE--KLAFADVVSNAMLLVQAGLETTAS
Mflv_1768|M.gilvum_PYR-GCK          TARTAEPPRDDMIDVLLSAEIDGE--KLAFGDVVSNAMLLVQAGLETTAS
MMAR_4717|M.marinum_M               IEIRDNPR-PGLVNALVQMRIDGQ--PAPDLEILGNLGLVIGGGFDTTTA
MSMEG_4803|M.smegmatis_MC2_155      MEIRQNPR-PGLVNALLQLRIDGE--PAPDMEILGNLGLIIGGGFDTTTA
TH_3303|M.thermoresistible__bu      TERRQNPTGEGLIDFLVTAEIDGE--PIPDDKVFSMVNLVIAGGFDTTTA
MLBr_02088|M.leprae_Br4923          KCRRGTPG-EDLISRLIELDESGD--QLTEEEIIATCGLLLVAGHETTVN
                                              .  . :     ..:       .       .  .* :*.  

Mb2289|M.bovis_AF2122/97            AITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQ
MUL_3863|M.ulcerans_Agy99           TISGGLHALIEHPDQLARLQADP-ALMSLATEEMIRWVTPVKQFMRTASS
Rv3518c|M.tuberculosis_H37Rv        TLSGGTEQLLRNRDQWDLLQRDP-SLLPGAIEEMLRWTAPVKNMCRVLTA
MAB_1406c|M.abscessus_ATCC_199      MLGGAIQLLHQNPAQRQKLIDDP-SLIPGAVEEFLRLTSPVQGLARTATR
MAV_2213|M.avium_104                SLDCFFVYLARHPQHRRQLVERP-DVLPGAVEELLRWETPVPGVARVATQ
Mvan_4979|M.vanbaalenii_PYR-1       AMSFAYHYLATNPAERDRLIDDPD-LLTRAVEEFIRFAGSIHGIPRTVAR
Mflv_1768|M.gilvum_PYR-GCK          AMSFAYHYLATHPAERDRLIAEPD-LLARAVEEFIRFAGSIHGIPRTVAK
MMAR_4717|M.marinum_M               LTAHALEWLSEHPDERERLWRNRDTLIDSATEEFLRYFTPAPGDGRTFSD
MSMEG_4803|M.smegmatis_MC2_155      LTAHALEWLGEHPDERERLSRERDTLLNPATEEFLRFFTPAPGDGRTFAE
TH_3303|M.thermoresistible__bu      VTVSSLVYLAEHPEDRQRLIDNPD-LLPRAIEEFLRAFTPQQALARTVTK
MLBr_02088|M.leprae_Br4923          LIANAVLAMLRNPSQWKALSSNP-QRAPLVVEETLRYDPAIHLIGRVAAK
                                            :     .              . ** :*   .     *. : 

Mb2289|M.bovis_AF2122/97            DIELRGTKMAAGDKVSLWYCSANRDESKFA-DPWTFDLARNPNPHLGFGG
MUL_3863|M.ulcerans_Agy99           DTVVRGIPIAAGESVLLSYVSANRDEEVFD-QPFRFDIGREPNKHVAFGY
Rv3518c|M.tuberculosis_H37Rv        DTEFHGTALCAGEKMMLLFESANFDEAVFC-EPEKFDVQRNPNSHLAFGF
MAB_1406c|M.abscessus_ATCC_199      DVIIGDTTIPAGRRALLLYGSANRDEREYGNDAAELDVLRKPRNILTFSH
MAV_2213|M.avium_104                DVEVGGCPISKGERVSPLLGAANTDPAEFP-DPETVDFTRSPNRHRAFGG
Mvan_4979|M.vanbaalenii_PYR-1       EVELSGCTFSPGESVIVNYAAANRDEQEFP-DAHRCILDRRDNRHLGFGA
Mflv_1768|M.gilvum_PYR-GCK          EVELSGCTFSPGESVIVNYASANRDEEQFP-EADRCILDRRENRHLGFGA
MMAR_4717|M.marinum_M               DVEFDGIHFKEGERLWISWAMANRDPQVFP-DPDELVLDRRGNRHFSFGI
MSMEG_4803|M.smegmatis_MC2_155      DAEVAGYKFKQYERLWLSWAMANRDPSVFD-KPNEVILDRKGNRHFSFGI
TH_3303|M.thermoresistible__bu      PVTVAGVELQPGERVLLSWASANQDETAFE-RPEEIILDRFPNRHTTFGI
MLBr_02088|M.leprae_Br4923          DMTIGQTTLTEGDTMVLLLAAANRDPAVYS-RPDEFDPDRPSSRHLAFAV
                                       .    :            ** *   :   .      *       *. 

Mb2289|M.bovis_AF2122/97            GGAHFCLGANLARREIRVAFDELRRQMPDVVATEEP---ARLLSQFIHGI
MUL_3863|M.ulcerans_Agy99           G-VHFCMGAALARMEVASFFTELLPRLKSIELSGDP---QFTATTFVGGL
Rv3518c|M.tuberculosis_H37Rv        G-THFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGL
MAB_1406c|M.abscessus_ATCC_199      G-NHHCLGAAAARMQSRIALEELLTRIPDFEVDLDG----VTWADGSYVR
MAV_2213|M.avium_104                G-PHRCLGSHLARMELRVALREFHRRIPDYEIKPGTQ---LTYTAALRSV
Mvan_4979|M.vanbaalenii_PYR-1       G-VHRCLGSNLARLEFQVGLERVLTRMPDFALSPTS-KAEFHGNSVTRGF
Mflv_1768|M.gilvum_PYR-GCK          G-VHRCLGSNLARLEFQVGLERVLTRMPDFTLTAGA-EAKFHGNSVTRGF
MMAR_4717|M.marinum_M               G-VHRCIGSNVARTVFKSMLSAVADRMPDYRCDPDG-AVHYETIGVIQGM
MSMEG_4803|M.smegmatis_MC2_155      G-VHRCVGSNVARTVFKSMLTAVLDRMPDYVCDPEG-TVHYDTIGVIQGM
TH_3303|M.thermoresistible__bu      G-IHRCLGSHVARIELETMIRRVLDRMPDYHVDLAA-ARRYPSIGIINGW
MLBr_02088|M.leprae_Br4923          G-SHFCLGAALARLEATVTLSAISARFPQVQLAGEL---VYKPNVAMRGM
                                    *  * *:*   **         .  :: .                     

Mb2289|M.bovis_AF2122/97            KTLPVTWS---------------------------------------
MUL_3863|M.ulcerans_Agy99           KRLPVSYSLM-------------------------------------
Rv3518c|M.tuberculosis_H37Rv        ESMPVVFTPSPPLG---------------------------------
MAB_1406c|M.abscessus_ATCC_199      RPLTVPIRVR-------------------------------------
MAV_2213|M.avium_104                ESLPLVFPVR-------------------------------------
Mvan_4979|M.vanbaalenii_PYR-1       RSVPVVFTPG--------------KRVTA------------------
Mflv_1768|M.gilvum_PYR-GCK          RSVPVTFTPA--------------ARTR-------------------
MMAR_4717|M.marinum_M               RKLPATFTPGRKAGAGLDETLAKLQRICDEQELARPVTERKQAAVID
MSMEG_4803|M.smegmatis_MC2_155      RNLPATFTPSRPLGPGLDETLEKLQRICNEEELARPITERKERAVID
TH_3303|M.thermoresistible__bu      INAPATFTPG--------------QRLRDEK-LPGA-----------
MLBr_02088|M.leprae_Br4923          SALPVQV----------------------------------------
                                       .