For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
APEPLGSGEARNRRARIAVAALFLTNGALFANLLPRYPEIKADLAMSNAAYGAAVASFSAGALLAGPTAA ALIRRFQSSRVALATTVALAVLIVVAGLAGTPLLFAVALFAAGACDAVTDVAQNVNGLRLQRNYGRSIIN SLHAVWAVGAIVGGLMGAGAIALQIPRPIHLAAAAVLFCGVVLAAYPSLLHGPDHDDHPSTRNTDGSGVR AVVLLTLLALVGIAVAGATVEDAGSSWATLYLRDSLGAPGAVAVMGYIALVGFMFIGRMTGDRLVDRFGE RAVARSGGLITAAGMGAALAFPSVPGTIAGFAAAGLGVATVIPAAMRAADELPGLRAGTGLTVLTWLMRV GFLGAPLIVGVVADATSLRAGLLTVPVAGAALVVLAGVLGSRCRG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3174 | - | - | 100% (396) | major facilitator superfamily transporter |
M. vanbaalenii PYR-1 | Mvan_5926 | - | 2e-10 | 28.22% (404) | major facilitator superfamily transporter |
M. vanbaalenii PYR-1 | Mvan_1951 | - | 2e-10 | 23.02% (391) | major facilitator superfamily transporter |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2871c | efpA | 3e-06 | 24.12% (398) | integral membrane efflux protein EfpA |
M. gilvum PYR-GCK | Mflv_3420 | - | 1e-168 | 77.66% (385) | major facilitator transporter |
M. tuberculosis H37Rv | Rv2846c | efpA | 3e-06 | 24.12% (398) | integral membrane efflux protein EfpA |
M. leprae Br4923 | MLBr_01562 | - | 1e-08 | 24.21% (409) | putative transmembrane efflux protein |
M. abscessus ATCC 19977 | MAB_4138c | - | 4e-39 | 30.65% (385) | putative major facilitator superfamily protein |
M. marinum M | MMAR_1887 | efpA | 6e-08 | 23.88% (402) | integral membrane efflux protein EfpA |
M. avium 104 | MAV_4712 | - | 1e-38 | 30.14% (365) | transporter, major facilitator family protein |
M. smegmatis MC2 155 | MSMEG_3671 | - | 1e-152 | 73.47% (377) | integral membrane protein |
M. thermoresistible (build 8) | TH_3240 | - | 1e-142 | 67.25% (397) | PUTATIVE putative major facilitator superfamily MFS_1 |
M. ulcerans Agy99 | MUL_2115 | efpA | 7e-08 | 24.38% (402) | integral membrane efflux protein EfpA |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1887|M.marinum_M MTALNDTERAVHNWTSGRQERPTSARATRETETASERASRYYPTWLPSR- MUL_2115|M.ulcerans_Agy99 MTALNDTERAVHNWTSGRQERPTSARATRETETASERASRYYPTWLPSR- Mb2871c|M.bovis_AF2122/97 MTALNDTERAVRNWRAGRPHRPAPMRPPRSEETASERPSRYYPTWLPSR- Rv2846c|M.tuberculosis_H37Rv MTALNDTERAVRNWTAGRPHRPAPMRPPRSEETASERPSRYYPTWLPSR- MLBr_01562|M.leprae_Br4923 MVTLYDHERAVHNWTAARSDRPAPSRLTQQVEPASERTSK-YPTLLPSGR Mvan_3174|M.vanbaalenii_PYR-1 -----------------------MAPEPLGSGEARNRRAR---------- Mflv_3420|M.gilvum_PYR-GCK ------MDAILHRPRAARDLKGAWVGSHLMASDARIRRAR---------- MSMEG_3671|M.smegmatis_MC2_155 -----------------------MVTEQR--DPVTTRRAR---------- TH_3240|M.thermoresistible__bu -----------------------MASGRVESRTRQHQRAR---------- MAB_4138c|M.abscessus_ATCC_199 -----------------------MLLAEVAVGGARSLAQRRGEDYFLTKP MAV_4712|M.avium_104 ------------------MTDSSPPAKGTFTVEMLSRAKR---------- : MMAR_1887|M.marinum_M ----RFIAAVIAIGGMQLLATMDSTVAIVALPKIQDELSLSDAGRSWVIT MUL_2115|M.ulcerans_Agy99 ----RFIAAVIAIGGMQLLATMDSTVAIVALPKIQDELSLSDAGRSWVIT Mb2871c|M.bovis_AF2122/97 ----SFIAAVIAIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWVIT Rv2846c|M.tuberculosis_H37Rv ----SFIAAVIAIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWVIT MLBr_01562|M.leprae_Br4923 FPSGRFIAAVIVIGGMQLLATMDSTVAIVALPKIQNELSLSDAGRSWGIT Mvan_3174|M.vanbaalenii_PYR-1 ----IAVAALFLTNGALFANLLP------RYPEIKADLAMSNAAYGAAVA Mflv_3420|M.gilvum_PYR-GCK ----AASAALFLTNGALFANLLP------RFPEIKSDLAMSNAGYGAAVA MSMEG_3671|M.smegmatis_MC2_155 ----VAVAALFLTNGAIFANLLP------RYPEIKTDLQLSNATYGAAVA TH_3240|M.thermoresistible__bu ----RAVAVLFLTNGALFANLLP------RYPEIKTDLALSNTGYGVTIA MAB_4138c|M.abscessus_ATCC_199 LRMRVAVIGVFASFGLVVATWAV------HLPTMKQATGMSSTELGFVVL MAV_4712|M.avium_104 -----GVTAVFVAHGLLFASWAA------HIPQVKAGLGLDDAALGTALF :: * . * :: :..: . : MMAR_1887|M.marinum_M AYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATLV MUL_2115|M.ulcerans_Agy99 AYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATLV Mb2871c|M.bovis_AF2122/97 AYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATLV Rv2846c|M.tuberculosis_H37Rv AYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEATLV MLBr_01562|M.leprae_Br4923 AYVLTFGGLMLLGGRLGDTIGRKRTFIVGVALFTISSVLCAVAWDEVTLV Mvan_3174|M.vanbaalenii_PYR-1 SFS---AGALLAGPTAAALIRRFQSSRVALATTVALAVLIVVAGLAGTPL Mflv_3420|M.gilvum_PYR-GCK AFS---AGALLAGPAAGALIRRFQSARVAVVTTVALASLIVTAAVAPTPL MSMEG_3671|M.smegmatis_MC2_155 AFS---AGALIAGLTAGALIRRFRSSRVGVTLTVALAVFVFAAGLAPTPI TH_3240|M.thermoresistible__bu AFS---AGALTAGLTAAMLIRRFRSARVAVVGTLVLAAAVLAAGLAGTAP MAB_4138c|M.abscessus_ATCC_199 GLG---VGALLGMQLSGVLVDRFGSGPIAIVGGAAMALGVNIPLAAHTVW MAV_4712|M.avium_104 GAP---LGSVLATLAGHWALPRWGSHRLIPVTVAGYAAAGTTVGLARSGP . * : : * : : . : : MMAR_1887|M.marinum_M IARLSQGVGSAIASPTGLALVATTFPKGPARNAATAVFAAMTAVGSVMGL MUL_2115|M.ulcerans_Agy99 IARLSQGVGSAIASPTGLALVATTFPKGPTRNAATAVFAAMTAVGSVMGL Mb2871c|M.bovis_AF2122/97 IARLSQGVGSAIASPTGLALVATTFPKGPARNAATAVFAAMTAIGSVMGL Rv2846c|M.tuberculosis_H37Rv IARLSQGVGSAIASPTGLALVATTFPKGPARNAATAVFAAMTAIGSVMGL MLBr_01562|M.leprae_Br4923 IARLLQGIGSAIASPTGLALVATTFSKGSARNTATAVFAAMTAIGSVMGL Mvan_3174|M.vanbaalenii_PYR-1 LFAVALFAAGACDAVTDVAQNVNGLR--LQRNYGRSIINSLHAVWAVGAI Mflv_3420|M.gilvum_PYR-GCK VFAATLLFAGASDAITDVAQNVNALR--VQRNYGRSIINSLHAIWAAGAI MSMEG_3671|M.smegmatis_MC2_155 LFAGALFLAGACDSIVDVAQNAHGLR--VQREYGRSIINSLHAVWAIGAV TH_3240|M.thermoresistible__bu VLGAALFVAGAADAVTDVAQNAHGLR--VQRAYGRSIINSFHAVWSVGAL MAB_4138c|M.abscessus_ATCC_199 VAGVGAVLCGVTVGITDVAMNAAAVD--VERFYGRPIMASFHGVFSVGNV MAV_4712|M.avium_104 ALFAALALWGMFQGALDVAMNTQAGT--VERRAGAPMMARFHGMWSLGTL . . .:* . * . .:: : .: : : MMAR_1887|M.marinum_M VVGGALTEVSWRLAFMVNVPIGLVMIYLARTALRETNRERMKLDAAGAIL MUL_2115|M.ulcerans_Agy99 VVGGALTEVSWRLAFMVNVPIGLVMIYLARTALRETNRERMKLDAAGAIL Mb2871c|M.bovis_AF2122/97 VVGGALTEVSWRWAFLVNVPIGLVMIYLARTALRETNKERMKLDATGAIL Rv2846c|M.tuberculosis_H37Rv VVGGALTEVSWRWAFLVNVPIGLVMIYLARTALRETNKERMKLDATGAIL MLBr_01562|M.leprae_Br4923 VVGGALTEVSWRLAFLVNVPIGLVMIYLARTALHETHKERMKLDAAGAIL Mvan_3174|M.vanbaalenii_PYR-1 VGG-----------------------LMGAGAIALQIPRPIHLAAAAVLF Mflv_3420|M.gilvum_PYR-GCK TGG-----------------------LMGAGAIALGVPRAIHLVVAAVLF MSMEG_3671|M.smegmatis_MC2_155 LGG-----------------------LTGAATIAMHIPRGVHLAAIAVVF TH_3240|M.thermoresistible__bu FGG-----------------------LMGGTAVALNIPRSVHLAVAAVLF MAB_4138c|M.abscessus_ATCC_199 VGAG-----------------------IGSAAFALHLKVWATVLGVTVLC MAV_4712|M.avium_104 AGA-----------------------LIGAACVGAGIGLTAQLTVLGAVV . . . : .: MMAR_1887|M.marinum_M ATLACTAAVFAFSMGPEKGWLSITTIGSGAVAFAAALGFVLVERTAENPV MUL_2115|M.ulcerans_Agy99 ATLACTAAVFAFSMGPEKGWLSITTIGSGAVAFAAALGFVLVERTAENPV Mb2871c|M.bovis_AF2122/97 ATLACTAAVFAFSIGPEKGWMSGITIGSGLVALAAAVAFVIVERTAENPV Rv2846c|M.tuberculosis_H37Rv ATLACTAAVFAFSIGPEKGWMSGITIGSGLVALAAAVAFVIVERTAENPV MLBr_01562|M.leprae_Br4923 ATLACTAAVFAFSMGPEKGWISLTTIGSGLVALVAAIAFAVVERTAENPV Mvan_3174|M.vanbaalenii_PYR-1 CGVVLAAYPSLLHGPDHDDHPSTRNTDGSGVRAVVLL------------- Mflv_3420|M.gilvum_PYR-GCK CAIVCAAYPYLLKGPDHDDHPSARDGGTARVGPMVYL------------- MSMEG_3671|M.smegmatis_MC2_155 SIVALAAFRFLLPGDDHDDHPAAHAPAGLRAGPRTYL------------- TH_3240|M.thermoresistible__bu SVVVLVGYRFLLPGEDHDDRAHGVRNPGPRSGLRVYA------------- MAB_4138c|M.abscessus_ATCC_199 LALLTCSASVLLRGKLRAGEVEAPDTVPYTMPPPVSYR------------ MAV_4712|M.avium_104 LLVVVMLTRRLLPDAADSVAAPPEPAAGRRVTP----------------- : : MMAR_1887|M.marinum_M VPFDLFHDRNRLVTFIAIFLAGGVMFSLTVCIG-LYVQDVLGYSALRAGV MUL_2115|M.ulcerans_Agy99 VPFDLFHDRNRLVTFIAIFLAGGVMFSLTVCIG-LYVQDVLGYSALRAGV Mb2871c|M.bovis_AF2122/97 VPFHLFRDRNRLVTFSAILLAGGVMFSLTVCIG-LYVQDILGYSALRAGV Rv2846c|M.tuberculosis_H37Rv VPFHLFRDRNRLVTFSAILLAGGVMFSLTVCIG-LYVQDILGYSALRAGV MLBr_01562|M.leprae_Br4923 VPFDLFRDRNRLVTFIAIFLAGGVIFSLTVSIG-LYIQDILGYSALRAGI Mvan_3174|M.vanbaalenii_PYR-1 ----------TLLALVGIAVAGATVEDAGSSWATLYLRDSLGAPGAVAVM Mflv_3420|M.gilvum_PYR-GCK ----------TLLALVALAMAGATVEDAGSSWATLYLRDELGAPGAVAAF MSMEG_3671|M.smegmatis_MC2_155 ----------ILLALVVIAIAGATVEDAGSSWATLYLRDTLHTPPAVAAF TH_3240|M.thermoresistible__bu ----------ILAALVGIAVAGAVIEDAGSTWAILYLRDNLTAPPAVAVS MAB_4138c|M.abscessus_ATCC_199 --------RGQVVVLGLLAFLLMLSEGSATDWSSLHAQEHLGASHSEGAF MAV_4712|M.avium_104 ----------AVAILAAVSFASFLCEGAATDWSATYLRDVVGAGPSVAAA : : : . . . : :: : . MMAR_1887|M.marinum_M GFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGYLLVCAMIYGWAFMQRG MUL_2115|M.ulcerans_Agy99 GFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGYLLVCAMIYGWAFMQRG Mb2871c|M.bovis_AF2122/97 GFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGYLLFGAMLYGSFFMHRG Rv2846c|M.tuberculosis_H37Rv GFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGYLLFGAMLYGSFFMHRG MLBr_01562|M.leprae_Br4923 GFIPFVIAMGIGLGVSSQLVSRFSPRVLTIGGGWLLMVAMLYGWAFMNRG Mvan_3174|M.vanbaalenii_PYR-1 GYIALVGFMFIGRMTGDRLVDRFGERAVARSGGLITAAGMG-----AALA Mflv_3420|M.gilvum_PYR-GCK GYVALVGFLFVGRLIGDRLVDRYGDRAVARAGGMITAVGMG-----IALA MSMEG_3671|M.smegmatis_MC2_155 GYIALVGFMFIGRMIGDRLVDRFGETAVVRAGGLIAAVGMG-----AALA TH_3240|M.thermoresistible__bu GYLALAGGMLIGRMTGDRLVDRFGERAVVRTGALLIAAGMG-----GALA MAB_4138c|M.abscessus_ATCC_199 AFGVFMLAMTVGRFTVDKLVERVGRVRVLRGGCALAAVGML-----TVIA MAV_4712|M.avium_104 SYAAYTLTMVVTRFAAGRLHARLPSRRLLPALAVLAVAGMS-----VTLA .: : : .:* * : : .* . MMAR_1887|M.marinum_M VPYFPNLVAPIVIGGIGIGMAVVPLTLAAIAGVGFDRIGPVSALTLMLQS MUL_2115|M.ulcerans_Agy99 VPYFPNLVAPIVIGGIGIGMAVVPLTLAAIAGVGFDRIGPVSALTLMLQS Mb2871c|M.bovis_AF2122/97 VPYFPNLVMPIVVGGIGIGMAVVPLTLSAIAGVGFDQIGPVSAIALMLQS Rv2846c|M.tuberculosis_H37Rv VPYFPNLVMPIVVGGIGIGMAVVPLTLSAIAGVGFDQIGPVSAIALMLQS MLBr_01562|M.leprae_Br4923 VPYFPNLLAPIVVGGIGIGMAVVPLTLSAIAGVGFDRIGPVSAIALMLQS Mvan_3174|M.vanbaalenii_PYR-1 FPSVPGTIAGFAAAGLGVATVIPAAMRAADELPGLRAGTGLTVLTWLMRV Mflv_3420|M.gilvum_PYR-GCK FPTVPGTIVGFAAAGLGVATVIPAAMRTADELPGLRPGTGLTMLTWLMRI MSMEG_3671|M.smegmatis_MC2_155 FPSTAGSIAGFAAAGFGVATLIPAAMHAADQLPGLRPGTGLTAVTWLMRV TH_3240|M.thermoresistible__bu VPTVPGTIGGFAAAGLGVATLIPAAMHGADQLPGIRAGTGLMAVTWLMRV MAB_4138c|M.abscessus_ATCC_199 APVLPLTLAGWVAVGLGLAGGVPQVFTVAGNIDEQHEGRVLSRVVGTGYV MAV_4712|M.avium_104 TADAAAGVLGFAALGVGVALLVPTAFSAAYGARG--AGSAIAIVAATGWL . . : . *.*:. : * : :. MMAR_1887|M.marinum_M --LGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDAQLHALDHGYTYGLL MUL_2115|M.ulcerans_Agy99 --LGGPLVLAGIQAVITSRTLYLGGTTGPVKFMNDAQLHALDHGYTYGLL Mb2871c|M.bovis_AF2122/97 --LGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDVQLAALDHAYTYGLL Rv2846c|M.tuberculosis_H37Rv --LGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDVQLAALDHAYTYGLL MLBr_01562|M.leprae_Br4923 --LGGPLVLAVIQAVITSRTLYLGGTTGPVKFMNDAQLRALDHGYTYGLL Mvan_3174|M.vanbaalenii_PYR-1 GFLGAPLIVGVVADATSLR---------------------------AGLL Mflv_3420|M.gilvum_PYR-GCK GFLGAPLIVGVVADAVSLR---------------------------AGLL MSMEG_3671|M.smegmatis_MC2_155 GFFGAPLLVGVVADAAGLR---------------------------AGLL TH_3240|M.thermoresistible__bu GFLASPPVVGAIADATSLR---------------------------VGLL MAB_4138c|M.abscessus_ATCC_199 AVLGGPALIGWVADALSLN---------------------------TALV MAV_4712|M.avium_104 GYLLGPPLIGHLSEWVGLS---------------------------GALV : .* ::. : .*: MMAR_1887|M.marinum_M WVAGAAVIVGGAAVFIGYTPEQVAHAQEVKEAIDAGEL MUL_2115|M.ulcerans_Agy99 WVAGAAVIVGGAAVFIGYTPEQVAHAQEVKEAIDAGEL Mb2871c|M.bovis_AF2122/97 WVAGAAIIVGGMALFIGYTPQQVAHAQEVKEAIDAGEL Rv2846c|M.tuberculosis_H37Rv WVAGAAIIVGGMALFIGYTPQQVAHAQEVKEAIDAGEL MLBr_01562|M.leprae_Br4923 WVAGAVVIVGVAALFIGYTPEQVAYAQEVKEAVDAGEL Mvan_3174|M.vanbaalenii_PYR-1 TVPVAGAALVVLAGVLGSRCRG---------------- Mflv_3420|M.gilvum_PYR-GCK SVPIAGIAIIALAAALLTARRRR--------------- MSMEG_3671|M.smegmatis_MC2_155 VVPAAGVLAIVLAGALRPHRVSVGDAGQLDREHT---- TH_3240|M.thermoresistible__bu GVPLAGLVAAVLAGVLSGRRRTPRW------------- MAB_4138c|M.abscessus_ATCC_199 LPIFAVVICGCAAGALAVTPPSKSVKPPR--------- MAV_4712|M.avium_104 TIPVMMTIVAVAIRYTPAFDTADEFHRAPAG-------