For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TALHEAPIQKDPGTPAVSERARGERRLGIYLTLPSYVVMLLVTAYPLGYALVLSLYNFRLTDPEGRSFVG LSNYLVILTDPLWWNDFVTTLAITVVTVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSAFI WRYAFAIDSGFVNQWLNLTEFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQVPEDMQEAAKVDGA TAWQRLWKITLPNMKAAIMVALLFRTLDAWRIFDNPYVMTAGANNTETISFLAYRQNVTLVNLGMGSAVS VLLFLSVVGIAWIFIKVFKTDLSQVRGDQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_2543 | - | - | 100% (310) | binding-protein-dependent transport systems inner membrane component |
M. vanbaalenii PYR-1 | Mvan_2623 | - | 4e-36 | 30.30% (264) | binding-protein-dependent transport systems inner membrane |
M. vanbaalenii PYR-1 | Mvan_2542 | - | 1e-08 | 21.98% (232) | binding-protein-dependent transport systems inner membrane |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1268 | sugA | 2e-75 | 52.71% (277) | sugar-transport integral membrane protein ABC transporter |
M. gilvum PYR-GCK | Mflv_3852 | - | 1e-173 | 96.45% (310) | binding-protein-dependent transport systems inner membrane |
M. tuberculosis H37Rv | Rv1236 | sugA | 2e-75 | 52.71% (277) | sugar-transport integral membrane protein ABC transporter |
M. leprae Br4923 | MLBr_01087 | - | 8e-75 | 51.64% (275) | putative ABC-transport protein, inner membrane component |
M. abscessus ATCC 19977 | MAB_1373 | - | 4e-77 | 50.00% (292) | sugar ABC transporter, permease protein SugA |
M. marinum M | MMAR_4205 | sugA | 2e-71 | 49.82% (281) | sugar-transport integral membrane protein ABC transporter |
M. avium 104 | MAV_1375 | sugA | 8e-74 | 52.00% (275) | ABC transporter, permease protein SugA |
M. smegmatis MC2 155 | MSMEG_5060 | - | 6e-79 | 51.04% (288) | ABC transporter, permease protein SugA |
M. thermoresistible (build 8) | TH_4307 | - | 8e-80 | 50.66% (304) | PUTATIVE binding-protein-dependent transport systems inner |
M. ulcerans Agy99 | MUL_4512 | sugA | 6e-65 | 49.05% (263) | sugar-transport integral membrane protein ABC transporter |
CLUSTAL 2.0.9 multiple sequence alignment Mb1268|M.bovis_AF2122/97 MTSVEQRTA------TAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYP Rv1236|M.tuberculosis_H37Rv MTSVEQRTA------TAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYP MAV_1375|M.avium_104 -----------------MLGRT----SEQRLALVLVAPAAILMLAVTAYP MMAR_4205|M.marinum_M ---------------MTALMRSRGRRAERRLAFALVAPATILMLLVIGYP MUL_4512|M.ulcerans_Agy99 ---------------MTAFLRSRGRRAERRLAFALVAPATILMLLVIGYP MLBr_01087|M.leprae_Br4923 ---MTAVVG------KSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYP MSMEG_5060|M.smegmatis_MC2_155 ---MTAAVT-----PSASAVASDDKKSERRLAFWLIAPAVLLMLAVTAYP TH_4307|M.thermoresistible__bu ---MTAAAEKADPTPAAAVARTDDTRSERRLAYWLIAPAVLLMVAVTGYP MAB_1373|M.abscessus_ATCC_1997 ---MTDRTS------------SEGKRAERRLGLLLIAPAALLMLAVTAYP Mvan_2543|M.vanbaalenii_PYR-1 ---MTALHEAPIQKDPGTPAVSERARGERRLGIYLTLPSYVVMLLVTAYP Mflv_3852|M.gilvum_PYR-GCK ---MTAPADAPIQKDPGKPSVSERAKGERRLGLYLTLPSYVVMLLVTAYP : *:**. * *: ::*: * .** Mb1268|M.bovis_AF2122/97 IGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRYWWTALAVTLAITAV Rv1236|M.tuberculosis_H37Rv IGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRYWWTALAVTLAITAV MAV_1375|M.avium_104 IGYAVWLSLQRNNLAAPHDTAFVGLSNYATILSDRYWWTALAVTLGITVV MMAR_4205|M.marinum_M IGYAMWLSLQRNNLATPNETRFIGLGNYQTILVDRYWWTALAVTAAITVV MUL_4512|M.ulcerans_Agy99 IGYAMWLSLQRNNLATPNETRFIGLGNYQTILVDRYWWTALAVTAAITVV MLBr_01087|M.leprae_Br4923 IGYAVWLSLQRYSLATPNETVFIGLGNYQTILTDPYWWTALAVTLAITVV MSMEG_5060|M.smegmatis_MC2_155 IGYAVWLSLQRYNLAEPHDTEFIGLANYVTVLTDGYWWTAFAVTLGITVV TH_4307|M.thermoresistible__bu IAYAVWLSLLRYNLAQPDDVSFVGLENYVTVLTDEYWWTAFAVTLGITVV MAB_1373|M.abscessus_ATCC_1997 ICYAIWLSVQKYSFASPQDRKFVWFDNYITVLSDRYWWSALVVTLVITVI Mvan_2543|M.vanbaalenii_PYR-1 LGYALVLSLYNFRLTDPEGRSFVGLSNYLVILTDPLWWNDFVTTLAITVV Mflv_3852|M.gilvum_PYR-GCK LGYALVLSLYNFRLTDPEGRSFVGLGNYLVILTDPIWWNDFVTTLAITVV : **: **: . :: *. *: : ** .:* * **. :..* **.: Mb1268|M.bovis_AF2122/97 SVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWT Rv1236|M.tuberculosis_H37Rv SVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWT MAV_1375|M.avium_104 SVSAEFVLGLALALVMHRTLVGKGLVRTAVLIPYGIVTAVASYSWYYAWT MMAR_4205|M.marinum_M SVACEFVLGLALALVMHRSLVAKGLVRTAVLVPYGIVTVVASYSWYYAWT MUL_4512|M.ulcerans_Agy99 SVACEFVLGLALALVMHRSLVAKGLVRTAVLVPYGIVTVVASYSWYYAWT MLBr_01087|M.leprae_Br4923 SVSIEFILGLMLALVMHRTLLGKSLVRIAVLIPYSIVTVVASYSWYYAWT MSMEG_5060|M.smegmatis_MC2_155 SVAIEFALGLALALVMHRTIFGKGAVRTAILIPYGIVTVAASYSWYYAWT TH_4307|M.thermoresistible__bu SVAIEFVLGLALALVMHRTIFGKGVVRTAILIPYGIVTVAASYSWYYAWT MAB_1373|M.abscessus_ATCC_1997 SVLIELVLGLALALVMHRTIFGRGVVRTAVLIPYGIVTVAASYSWYYAWT Mvan_2543|M.vanbaalenii_PYR-1 TVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSAFIWRYAFA Mflv_3852|M.gilvum_PYR-GCK TVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSAFIWRYAFA :* *: **: :*:** * : .:. :* *:*:**.***..::: * **:: Mb1268|M.bovis_AF2122/97 PGTGYLANLLPYDSAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAL Rv1236|M.tuberculosis_H37Rv PGTGYLANLLPYDSAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAL MAV_1375|M.avium_104 PGTGYLANLLPHGSAPLT-AQIPSLAIVVLAEVWKTTPFMSLLLLAGLAL MMAR_4205|M.marinum_M PGTGYLANLLPQGSAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAM MUL_4512|M.ulcerans_Agy99 PGTGYLANLLPQGIAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAM MLBr_01087|M.leprae_Br4923 PGTGYLASLLPQGSVPLT-EQIPSLSIVIIVEVWKTTPFMSLLLLVGLAL MSMEG_5060|M.smegmatis_MC2_155 PGTGYLANLLPEGSAPLT-DQLPSLAIVVLAEVWKTTPFMALLLLAGLAL TH_4307|M.thermoresistible__bu PGTGYLANLLPDGSAPLT-QQLPSLAIVVLAEVWKTTPFMALLLLAGLAL MAB_1373|M.abscessus_ATCC_1997 PGTGYLANLLPAGSAPLT-QQIPSLAVVILAEVWKTTPFMALLLLAGLAL Mvan_2543|M.vanbaalenii_PYR-1 IDSGFVNQWLNLTEFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQ Mflv_3852|M.gilvum_PYR-GCK IDSGFVNQWLNLTDFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQ .:*:: . * : .:: :: : *:******::****.**. Mb1268|M.bovis_AF2122/97 VPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFDNI Rv1236|M.tuberculosis_H37Rv VPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFDNI MAV_1375|M.avium_104 VPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDAFRIFDNI MMAR_4205|M.marinum_M VPEDLLQAAQVDGAGAWRRLTKIILPLIKPAVLVALLFRTLDAFRIFDNI MUL_4512|M.ulcerans_Agy99 VPEDLLQAAQVDGAGAWRRLTKIILPLIKPAVLVALLFRTLDAFRIFDNI MLBr_01087|M.leprae_Br4923 VPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNI MSMEG_5060|M.smegmatis_MC2_155 VPQDLLNAAQVDGAGPWKRLTKVILPMIKPAILVALLFRTLDAFRIFDNI TH_4307|M.thermoresistible__bu VPQELLNAAQMDGANAWQRLVKIILPMIKPAILVALLFRTLDAFRIFDNI MAB_1373|M.abscessus_ATCC_1997 VPDDLLKAAQVDGANGWSRLIRVTVPIMKPAILVALLFRTLDAFRIFDNI Mvan_2543|M.vanbaalenii_PYR-1 VPEDMQEAAKVDGATAWQRLWKITLPNMKAAIMVALLFRTLDAWRIFDNP Mflv_3852|M.gilvum_PYR-GCK VPEDMQEAAKVDGATAWQRLWKITLPNMKAAIMVALLFRTLDAWRIFDNP **::: .**::*** * ** :: :* :*.*::**********:***** Mb1268|M.bovis_AF2122/97 YVLTGGSNNTGSVSILGYDNLFKGFNVGLGSA----------------IS Rv1236|M.tuberculosis_H37Rv YVLTGGSNNTGSVSILGYDNLFKGFNVGLGSA----------------IS MAV_1375|M.avium_104 YVLTNGANNTGSVSMLGYDNLFKGFNVGLGSA----------------IS MMAR_4205|M.marinum_M YVLTGGDNDTASVSILGYDNLFKGFNVGLGSA----------------IS MUL_4512|M.ulcerans_Agy99 YVLTGGDNDTASVSILGYDNLFKGFNVGLAVQGIQCGPRFGDQRVDLRLC MLBr_01087|M.leprae_Br4923 YVLTRGVNNTDSVSILGYDNLFKGFNVGLGSA----------------IS MSMEG_5060|M.smegmatis_MC2_155 YILTGGSNDTGSVSILGYDNLFKAFNVGLGSA----------------IS TH_4307|M.thermoresistible__bu YILTGGANNTGSVSILGYNNLFKAFNLGLGSA----------------IS MAB_1373|M.abscessus_ATCC_1997 YVLTGGSNNTGSVSILGYDNLFKAFNVGLGSA----------------IS Mvan_2543|M.vanbaalenii_PYR-1 YVMTAGANNTETISFLAYRQNVTLVNLGMGSA----------------VS Mflv_3852|M.gilvum_PYR-GCK YVMTAGANNTETISFLAYRQNVTLVNLGMGSA----------------VS *::* * *:* ::*:*.* : .. .*:*:. :. Mb1268|M.bovis_AF2122/97 VLIFGCVAVIAFIFIKLFGA----AAPGGEPSGR---------------- Rv1236|M.tuberculosis_H37Rv VLIFGCVAVIAFIFIKLFGA----AAPGGEPSGR---------------- MAV_1375|M.avium_104 VLIFGCVGLIALVFVKVFGA----AAPGGDVDGR---------------- MMAR_4205|M.marinum_M VLIFGCVTLIAVVFITLFGAHQFHSAPGGVTDAR---------------- MUL_4512|M.ulcerans_Agy99 HSHCGCLHHAVRRPSIRFCARWCDRCALRLGPCRRVAGGERSGWPSTPWS MLBr_01087|M.leprae_Br4923 VLIFGCVALIAVIFIKVFGV----VAPGGDSNGY---------------- MSMEG_5060|M.smegmatis_MC2_155 VLIFLSVAIIAFIYIKIFGA----AAPGSDEEVR---------------- TH_4307|M.thermoresistible__bu VLIFLCVAVIAFIYIKIFGT----SAPGSDAERS---------------- MAB_1373|M.abscessus_ATCC_1997 VLIFLCVAIIAVIFIKGFGA----SAPTTDGEEARR-------------- Mvan_2543|M.vanbaalenii_PYR-1 VLLFLSVVGIAWIFIKVFKT----DLSQVRGDQ----------------- Mflv_3852|M.gilvum_PYR-GCK VLLFLSVVAIAWIFIKVFKT----DLSQVRGDQ----------------- .: . * . . Mb1268|M.bovis_AF2122/97 ----------- Rv1236|M.tuberculosis_H37Rv ----------- MAV_1375|M.avium_104 ----------- MMAR_4205|M.marinum_M ----------- MUL_4512|M.ulcerans_Agy99 WSTPCSRCCGS MLBr_01087|M.leprae_Br4923 ----------- MSMEG_5060|M.smegmatis_MC2_155 ----------- TH_4307|M.thermoresistible__bu ----------- MAB_1373|M.abscessus_ATCC_1997 ----------- Mvan_2543|M.vanbaalenii_PYR-1 ----------- Mflv_3852|M.gilvum_PYR-GCK -----------