For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TAFLRSRGRRAERRLAFALVAPATILMLLVIGYPIGYAMWLSLQRNNLATPNETRFIGLGNYQTILVDRY WWTALAVTAAITVVSVACEFVLGLALALVMHRSLVAKGLVRTAVLVPYGIVTVVASYSWYYAWTPGTGYL ANLLPQGIAPLTQQIPSLGIVVIAEVWKTTPFMSLLLLAGLAMVPEDLLQAAQVDGAGAWRRLTKIILPL IKPAVLVALLFRTLDAFRIFDNIYVLTGGDNDTASVSILGYDNLFKGFNVGLAVQGIQCGPRFGDQRVDL RLCHSHCGCLHHAVRRPSIRFCARWCDRCALRLGPCRRVAGGERSGWPSTPWSWSTPCSRCCGS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4512 | sugA | - | 100% (345) | sugar-transport integral membrane protein ABC transporter SugA |
M. ulcerans Agy99 | MUL_1248 | uspA | 7e-35 | 33.20% (256) | sugar-transport integral membrane protein ABC transporter |
M. ulcerans Agy99 | MUL_2254 | - | 1e-25 | 28.73% (268) | ABC-type sugar transport integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1268 | sugA | 1e-127 | 85.38% (260) | sugar-transport integral membrane protein ABC transporter |
M. gilvum PYR-GCK | Mflv_3852 | - | 4e-65 | 49.22% (258) | binding-protein-dependent transport systems inner membrane |
M. tuberculosis H37Rv | Rv1236 | sugA | 1e-127 | 85.38% (260) | sugar-transport integral membrane protein ABC transporter |
M. leprae Br4923 | MLBr_01087 | - | 1e-119 | 80.69% (259) | putative ABC-transport protein, inner membrane component |
M. abscessus ATCC 19977 | MAB_1373 | - | 1e-110 | 71.48% (263) | sugar ABC transporter, permease protein SugA |
M. marinum M | MMAR_4205 | sugA | 1e-146 | 98.86% (263) | sugar-transport integral membrane protein ABC transporter |
M. avium 104 | MAV_1375 | sugA | 1e-121 | 83.14% (255) | ABC transporter, permease protein SugA |
M. smegmatis MC2 155 | MSMEG_5060 | - | 1e-118 | 78.60% (257) | ABC transporter, permease protein SugA |
M. thermoresistible (build 8) | TH_4307 | - | 1e-114 | 75.10% (261) | PUTATIVE binding-protein-dependent transport systems inner |
M. vanbaalenii PYR-1 | Mvan_2543 | - | 1e-64 | 49.05% (263) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment MUL_4512|M.ulcerans_Agy99 ---------------MTAFLRSRGRRAERRLAFALVAPATILMLLVIGYP MMAR_4205|M.marinum_M ---------------MTALMRSRGRRAERRLAFALVAPATILMLLVIGYP Mb1268|M.bovis_AF2122/97 MTSVEQRTA------TAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYP Rv1236|M.tuberculosis_H37Rv MTSVEQRTA------TAVFSRTGSRMAERRLAFMLVAPAAMLMVAVTAYP MAV_1375|M.avium_104 -----------------MLGRT----SEQRLALVLVAPAAILMLAVTAYP MLBr_01087|M.leprae_Br4923 ---MTAVVG------KSWHVRASSVQPEQRLAFLLVTPAAMLMLVVTAYP MSMEG_5060|M.smegmatis_MC2_155 ---MTAAVT-----PSASAVASDDKKSERRLAFWLIAPAVLLMLAVTAYP TH_4307|M.thermoresistible__bu ---MTAAAEKADPTPAAAVARTDDTRSERRLAYWLIAPAVLLMVAVTGYP MAB_1373|M.abscessus_ATCC_1997 ---MTDRTS------------SEGKRAERRLGLLLIAPAALLMLAVTAYP Mflv_3852|M.gilvum_PYR-GCK ---MTAPADAPIQKDPGKPSVSERAKGERRLGLYLTLPSYVVMLLVTAYP Mvan_2543|M.vanbaalenii_PYR-1 ---MTALHEAPIQKDPGTPAVSERARGERRLGIYLTLPSYVVMLLVTAYP : *:**. * *: ::*: * .** MUL_4512|M.ulcerans_Agy99 IGYAMWLSLQRNNLATPNETRFIGLGNYQTILVDRYWWTALAVTAAITVV MMAR_4205|M.marinum_M IGYAMWLSLQRNNLATPNETRFIGLGNYQTILVDRYWWTALAVTAAITVV Mb1268|M.bovis_AF2122/97 IGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRYWWTALAVTLAITAV Rv1236|M.tuberculosis_H37Rv IGYALWLSLQRNNLATPNDTAFIGLGNYHTILIDRYWWTALAVTLAITAV MAV_1375|M.avium_104 IGYAVWLSLQRNNLAAPHDTAFVGLSNYATILSDRYWWTALAVTLGITVV MLBr_01087|M.leprae_Br4923 IGYAVWLSLQRYSLATPNETVFIGLGNYQTILTDPYWWTALAVTLAITVV MSMEG_5060|M.smegmatis_MC2_155 IGYAVWLSLQRYNLAEPHDTEFIGLANYVTVLTDGYWWTAFAVTLGITVV TH_4307|M.thermoresistible__bu IAYAVWLSLLRYNLAQPDDVSFVGLENYVTVLTDEYWWTAFAVTLGITVV MAB_1373|M.abscessus_ATCC_1997 ICYAIWLSVQKYSFASPQDRKFVWFDNYITVLSDRYWWSALVVTLVITVI Mflv_3852|M.gilvum_PYR-GCK LGYALVLSLYNFRLTDPEGRSFVGLGNYLVILTDPIWWNDFVTTLAITVV Mvan_2543|M.vanbaalenii_PYR-1 LGYALVLSLYNFRLTDPEGRSFVGLSNYLVILTDPLWWNDFVTTLAITVV : **: **: . :: *. *: : ** .:* * **. :..* **.: MUL_4512|M.ulcerans_Agy99 SVACEFVLGLALALVMHRSLVAKGLVRTAVLVPYGIVTVVASYSWYYAWT MMAR_4205|M.marinum_M SVACEFVLGLALALVMHRSLVAKGLVRTAVLVPYGIVTVVASYSWYYAWT Mb1268|M.bovis_AF2122/97 SVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWT Rv1236|M.tuberculosis_H37Rv SVTIEFVLGLALALVMHRTLIGKGLVRTAVLIPYGIVTVVASYSWYYAWT MAV_1375|M.avium_104 SVSAEFVLGLALALVMHRTLVGKGLVRTAVLIPYGIVTAVASYSWYYAWT MLBr_01087|M.leprae_Br4923 SVSIEFILGLMLALVMHRTLLGKSLVRIAVLIPYSIVTVVASYSWYYAWT MSMEG_5060|M.smegmatis_MC2_155 SVAIEFALGLALALVMHRTIFGKGAVRTAILIPYGIVTVAASYSWYYAWT TH_4307|M.thermoresistible__bu SVAIEFVLGLALALVMHRTIFGKGVVRTAILIPYGIVTVAASYSWYYAWT MAB_1373|M.abscessus_ATCC_1997 SVLIELVLGLALALVMHRTIFGRGVVRTAVLIPYGIVTVAASYSWYYAWT Mflv_3852|M.gilvum_PYR-GCK TVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSAFIWRYAFA Mvan_2543|M.vanbaalenii_PYR-1 TVAIELVLGFWFAFVMLRIVRGRGPLRTAILIPYGIVTVVSAFIWRYAFA :* *: **: :*:** * : .:. :* *:*:**.***..::: * **:: MUL_4512|M.ulcerans_Agy99 PGTGYLANLLPQGIAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAM MMAR_4205|M.marinum_M PGTGYLANLLPQGSAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAM Mb1268|M.bovis_AF2122/97 PGTGYLANLLPYDSAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAL Rv1236|M.tuberculosis_H37Rv PGTGYLANLLPYDSAPLT-QQIPSLGIVVIAEVWKTTPFMSLLLLAGLAL MAV_1375|M.avium_104 PGTGYLANLLPHGSAPLT-AQIPSLAIVVLAEVWKTTPFMSLLLLAGLAL MLBr_01087|M.leprae_Br4923 PGTGYLASLLPQGSVPLT-EQIPSLSIVIIVEVWKTTPFMSLLLLVGLAL MSMEG_5060|M.smegmatis_MC2_155 PGTGYLANLLPEGSAPLT-DQLPSLAIVVLAEVWKTTPFMALLLLAGLAL TH_4307|M.thermoresistible__bu PGTGYLANLLPDGSAPLT-QQLPSLAIVVLAEVWKTTPFMALLLLAGLAL MAB_1373|M.abscessus_ATCC_1997 PGTGYLANLLPAGSAPLT-QQIPSLAVVILAEVWKTTPFMALLLLAGLAL Mflv_3852|M.gilvum_PYR-GCK IDSGFVNQWLNLTDFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQ Mvan_2543|M.vanbaalenii_PYR-1 IDSGFVNQWLNLTEFDWFGDRWSAIFVICLSEIWKTTPFISLLLLAGLVQ .:*:: . * : .:: :: : *:******::****.**. MUL_4512|M.ulcerans_Agy99 VPEDLLQAAQVDGAGAWRRLTKIILPLIKPAVLVALLFRTLDAFRIFDNI MMAR_4205|M.marinum_M VPEDLLQAAQVDGAGAWRRLTKIILPLIKPAVLVALLFRTLDAFRIFDNI Mb1268|M.bovis_AF2122/97 VPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFDNI Rv1236|M.tuberculosis_H37Rv VPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFRIFDNI MAV_1375|M.avium_104 VPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLFRTLDAFRIFDNI MLBr_01087|M.leprae_Br4923 VPEDLLKAAQMDGAGAWRRLTKIILPIIKPAVMVALLFRTLDAFRIFDNI MSMEG_5060|M.smegmatis_MC2_155 VPQDLLNAAQVDGAGPWKRLTKVILPMIKPAILVALLFRTLDAFRIFDNI TH_4307|M.thermoresistible__bu VPQELLNAAQMDGANAWQRLVKIILPMIKPAILVALLFRTLDAFRIFDNI MAB_1373|M.abscessus_ATCC_1997 VPDDLLKAAQVDGANGWSRLIRVTVPIMKPAILVALLFRTLDAFRIFDNI Mflv_3852|M.gilvum_PYR-GCK VPEDMQEAAKVDGATAWQRLWKITLPNMKAAIMVALLFRTLDAWRIFDNP Mvan_2543|M.vanbaalenii_PYR-1 VPEDMQEAAKVDGATAWQRLWKITLPNMKAAIMVALLFRTLDAWRIFDNP **::: .**::*** * ** :: :* :*.*::**********:***** MUL_4512|M.ulcerans_Agy99 YVLTGGDNDTASVSILGYDNLFKGFNVGLAVQGIQCGPRFGDQRVDLRLC MMAR_4205|M.marinum_M YVLTGGDNDTASVSILGYDNLFKGFNVGLGSA----------------IS Mb1268|M.bovis_AF2122/97 YVLTGGSNNTGSVSILGYDNLFKGFNVGLGSA----------------IS Rv1236|M.tuberculosis_H37Rv YVLTGGSNNTGSVSILGYDNLFKGFNVGLGSA----------------IS MAV_1375|M.avium_104 YVLTNGANNTGSVSMLGYDNLFKGFNVGLGSA----------------IS MLBr_01087|M.leprae_Br4923 YVLTRGVNNTDSVSILGYDNLFKGFNVGLGSA----------------IS MSMEG_5060|M.smegmatis_MC2_155 YILTGGSNDTGSVSILGYDNLFKAFNVGLGSA----------------IS TH_4307|M.thermoresistible__bu YILTGGANNTGSVSILGYNNLFKAFNLGLGSA----------------IS MAB_1373|M.abscessus_ATCC_1997 YVLTGGSNNTGSVSILGYDNLFKAFNVGLGSA----------------IS Mflv_3852|M.gilvum_PYR-GCK YVMTAGANNTETISFLAYRQNVTLVNLGMGSA----------------VS Mvan_2543|M.vanbaalenii_PYR-1 YVMTAGANNTETISFLAYRQNVTLVNLGMGSA----------------VS *::* * *:* ::*:*.* : .. .*:*:. :. MUL_4512|M.ulcerans_Agy99 HSHCGCLHHAVRRPSIRFCARWCDRCALRLGPCRRVAGGERSGWPSTPWS MMAR_4205|M.marinum_M VLIFGCVTLIAVVFITLFGAHQFHSAPGGVTDAR---------------- Mb1268|M.bovis_AF2122/97 VLIFGCVAVIAFIFIKLFGA----AAPGGEPSGR---------------- Rv1236|M.tuberculosis_H37Rv VLIFGCVAVIAFIFIKLFGA----AAPGGEPSGR---------------- MAV_1375|M.avium_104 VLIFGCVGLIALVFVKVFGA----AAPGGDVDGR---------------- MLBr_01087|M.leprae_Br4923 VLIFGCVALIAVIFIKVFGV----VAPGGDSNGY---------------- MSMEG_5060|M.smegmatis_MC2_155 VLIFLSVAIIAFIYIKIFGA----AAPGSDEEVR---------------- TH_4307|M.thermoresistible__bu VLIFLCVAVIAFIYIKIFGT----SAPGSDAERS---------------- MAB_1373|M.abscessus_ATCC_1997 VLIFLCVAIIAVIFIKGFGA----SAPTTDGEEARR-------------- Mflv_3852|M.gilvum_PYR-GCK VLLFLSVVAIAWIFIKVFKT----DLSQVRGDQ----------------- Mvan_2543|M.vanbaalenii_PYR-1 VLLFLSVVGIAWIFIKVFKT----DLSQVRGDQ----------------- .: . * . . MUL_4512|M.ulcerans_Agy99 WSTPCSRCCGS MMAR_4205|M.marinum_M ----------- Mb1268|M.bovis_AF2122/97 ----------- Rv1236|M.tuberculosis_H37Rv ----------- MAV_1375|M.avium_104 ----------- MLBr_01087|M.leprae_Br4923 ----------- MSMEG_5060|M.smegmatis_MC2_155 ----------- TH_4307|M.thermoresistible__bu ----------- MAB_1373|M.abscessus_ATCC_1997 ----------- Mflv_3852|M.gilvum_PYR-GCK ----------- Mvan_2543|M.vanbaalenii_PYR-1 -----------