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M. vanbaalenii PYR-1 Mvan_2542 (-)

annotation: binding-protein-dependent transport systems inner membrane component
coordinates: 2681770 - 2682597
length: 275

TKNTKWWTIAGIVIVIYSFVPMLWMISLAFKPPSDIVSGKPSFLPSSITFDNFAQIFSQPLFTRALINSI
GIAVIATVISVIIAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRGLGIYDTWLGLIIP
YLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQAFRKVIVPLAAPGVFTTAILTFFFCWNDFLFAI
SLTSTDSARTVPAALAFFQGASYFESPVPYIMAASVIVTIPVVILVLIFQRRIVAGLTSGAVKG*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. vanbaalenii PYR-1 Mvan_2542 - - 100% (275) binding-protein-dependent transport systems inner membrane component
M. vanbaalenii PYR-1 Mvan_2622 - 2e-31 31.02% (274) binding-protein-dependent transport systems inner membrane
M. vanbaalenii PYR-1 Mvan_3390 - 9e-18 22.69% (260) binding-protein-dependent transport systems inner membrane

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb1269 sugB 3e-91 57.51% (273) sugar-transport integral membrane protein ABC transporter
M. gilvum PYR-GCK Mflv_3853 - 1e-154 97.45% (275) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37Rv Rv1237 sugB 3e-91 57.51% (273) sugar-transport integral membrane protein ABC transporter
M. leprae Br4923 MLBr_01088 - 1e-86 56.72% (268) putative ABC-transport protein, inner membrane component
M. abscessus ATCC 19977 MAB_1374 - 3e-92 59.12% (274) sugar ABC transporter, permease protein SugB
M. marinum M MMAR_4204 sugB 4e-90 56.51% (269) sugar-transport integral membrane protein ABC transporter
M. avium 104 MAV_1376 sugB 2e-86 56.87% (262) ABC transporter, permease protein SugB
M. smegmatis MC2 155 MSMEG_5059 - 2e-95 58.61% (273) ABC transporter, permease protein SugB
M. thermoresistible (build 8) TH_2867 - 4e-89 57.20% (271) PUTATIVE binding-protein-dependent transport systems inner
M. ulcerans Agy99 MUL_4511 sugB 6e-80 57.03% (249) sugar-transport integral membrane protein ABC transporter

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_4204|M.marinum_M               -----------MTTGSGRRTFWVVIDTMVVVYALLPVLWILSLSLKPTST
MUL_4511|M.ulcerans_Agy99           ----------------------------------------MSLSPKPTST
Mb1269|M.bovis_AF2122/97            -------------MGARRATYWAVLDTLVVGYALLPVLWIFSLSLKPTST
Rv1237|M.tuberculosis_H37Rv         -------------MGARRATYWAVLDTLVVGYALLPVLWIFSLSLKPTST
MLBr_01088|M.leprae_Br4923          MGIEKVKVTAGVRVGARRATIWVIIDTFVVGYALLPVLWILSLSLKPAST
MAV_1376|M.avium_104                -----------------------MIDTLVVVYALLPVLWIFSLSLKPTST
MSMEG_5059|M.smegmatis_MC2_155      ---------MADRVDARRATWWSVVNILVIVYALIPVLWILSLSLKPTSS
TH_2867|M.thermoresistible__bu      ---------VNERVTARRATGWIVIDLLVILYALFPVLWILSLSLKSTAT
MAB_1374|M.abscessus_ATCC_1997      ----------MSRPDSSRTAGWLIADVLVLCYALVPVLWVLSLSLKPTSS
Mvan_2542|M.vanbaalenii_PYR-1       --------------MTKNTKWWTIAGIVIVIYSFVPMLWMISLAFKPPSD
Mflv_3853|M.gilvum_PYR-GCK          --------------MTKNTKWWTIAGIVIVIYSFVPMLWMISLAFKPPSD
                                                                            :**: *..: 

MMAR_4204|M.marinum_M               VKDGR--LIPSSVTLDNYRGVFGG---DLFSSALINSIGIGLTTTVIAVL
MUL_4511|M.ulcerans_Agy99           VKDGR--LIPSSVTLDNYRGVFGG---DLFSSALINSIGIGLTTTVIAVL
Mb1269|M.bovis_AF2122/97            VKDGK--LIPSTVTFDNYRGIFRG---DLFSSALINSIGIGLITTVIAVV
Rv1237|M.tuberculosis_H37Rv         VKDGK--LIPSTVTFDNYRGIFRG---DLFSSALINSIGIGLITTVIAVV
MLBr_01088|M.leprae_Br4923          VKDGK--LIPSLVTFDNYRGIFRS---DLFSSALINSIGIGLTTTVIAVM
MAV_1376|M.avium_104                VKDGK--LIPSAISLENYRGIFRG---DFFSSALINSVGIGLITTAVAVL
MSMEG_5059|M.smegmatis_MC2_155      VKDGK--LIPTEITFANYKAIFSG---DAFTSALFNSIGIGLITTIIAVV
TH_2867|M.thermoresistible__bu      VKDGK--LIPDEITFDNYKAIFRGGGSGVFTSALINSIGIGLITTVIAVV
MAB_1374|M.abscessus_ATCC_1997      VKDGK--FFPWPITLDNYRGIFSG---NVFTSALVNSIGIGLIATVIAVS
Mvan_2542|M.vanbaalenii_PYR-1       IVSGKPSFLPSSITFDNFAQIFSQ---PLFTRALINSIGIAVIATVISVI
Mflv_3853|M.gilvum_PYR-GCK          IVSGEPSFLPSTVTFDNFAQIFSN---PLFTRALINSIGIALVATVISVI
                                    : .*.  ::*  ::: *:  :*       *: **.**:**.: :* ::* 

MMAR_4204|M.marinum_M               LGAMAAYAVARLDFPGKRLLVGVALLITMFPAISLVTPLFNIERRIGLFD
MUL_4511|M.ulcerans_Agy99           LGAMAACAVARLDFPGKRLLVGVTLLITMFPAISLVTPLFNIERRIGLFD
Mb1269|M.bovis_AF2122/97            LGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERAIGLFD
Rv1237|M.tuberculosis_H37Rv         LGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERAIGLFD
MLBr_01088|M.leprae_Br4923          FGAMAAYAIARLAFPGKRLLVGTTLLVTMFPAISLVTPLFNIERRVGLFD
MAV_1376|M.avium_104                LGAMAAYAVARLDFPGKRLLIGATLLITMFPAISLVTPLFNIERFLGLFD
MSMEG_5059|M.smegmatis_MC2_155      IGGMAAYAVARLQFPGKQLLIGVALLIAMFPHISLVTPIFNMWRGIGLFD
TH_2867|M.thermoresistible__bu      VGGMAAYAVARLNFPGKRLLIGVALLIAMFPQISLVTPLFNIERQLGLFD
MAB_1374|M.abscessus_ATCC_1997      VGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERSVGLFD
Mvan_2542|M.vanbaalenii_PYR-1       IAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRGLGIYD
Mflv_3853|M.gilvum_PYR-GCK          IAMFAAYAIARLEFPGKKVLLSLALGIAMFPQAALVGPLFDMWRGLGIYD
                                    .. :** *:*** ****: *:. :* ::***  :** *:*:: * :*::*

MMAR_4204|M.marinum_M               TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAQMDGATPYQAFRKV
MUL_4511|M.ulcerans_Agy99           TWPELILPYITFALPLAIYTLSAFFREIPWDLEKAAQMDGATPYQAFRKV
Mb1269|M.bovis_AF2122/97            TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKV
Rv1237|M.tuberculosis_H37Rv         TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKV
MLBr_01088|M.leprae_Br4923          TWAGLILPYITFALPLAIYTLSAFFAEIPWDLEKAAKMDGATSGQAFRKV
MAV_1376|M.avium_104                TWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKIDGATPAQAFRKV
MSMEG_5059|M.smegmatis_MC2_155      TWPGLIIPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPAQAFRKV
TH_2867|M.thermoresistible__bu      TWAGLIIPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKV
MAB_1374|M.abscessus_ATCC_1997      TWPGLIIPYITFALPLAIYTLSAFFREIPWELEKAAKMDGATPAQAFWKV
Mvan_2542|M.vanbaalenii_PYR-1       TWLGLIIPYLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQAFRKV
Mflv_3853|M.gilvum_PYR-GCK          TWLGLIIPYLTFALPLSIWTMSAFFRQIPWEMEHAAQVDGATQWQAFRKV
                                    **  **:**:******:*:*:**** :***::*:**::****  *** **

MMAR_4204|M.marinum_M               IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKASITAPVAIANFAGSS
MUL_4511|M.ulcerans_Agy99           IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKASITAPIAIANFAGSS
Mb1269|M.bovis_AF2122/97            IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSS
Rv1237|M.tuberculosis_H37Rv         IVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSS
MLBr_01088|M.leprae_Br4923          IVPLAAPGLVTAAILVFIFAWNDLLLALSLTSTKAAITAPVAITNFTGSS
MAV_1376|M.avium_104                IVPLAAPGVVTAAILVFIFAWNDLLLALTLTATKAAITAPVAIVSFSGSS
MSMEG_5059|M.smegmatis_MC2_155      IAPLAAPGIVTAAILVFIFAWNDLLLALSLTATQRAITAPVAIANFTGSS
TH_2867|M.thermoresistible__bu      IAPLAAPGIVTAAILVFIFAWNDLLLALSLTATERAITAPVAIANFTGSS
MAB_1374|M.abscessus_ATCC_1997      IAPLATPGIVTSAILVFIFAWNDLLLAISLTATDRSITAPVAIANFTGSS
Mvan_2542|M.vanbaalenii_PYR-1       IVPLAAPGVFTTAILTFFFCWNDFLFAISLTSTDSARTVPAALAFFQGAS
Mflv_3853|M.gilvum_PYR-GCK          IVPLAAPGVFTTAILTFFFCWNDFLFAISLTSTDSARTVPAALAFFQGAS
                                    *.***:**:.*:***.*:*.***:*:*::**:*. : *.* *:. * *:*

MMAR_4204|M.marinum_M               QFEEPTGSIAAGAMVITVPIIVFVLIFQRRIVAGLTSGAVKG
MUL_4511|M.ulcerans_Agy99           QFEEPTGSIAAGAMVITVPIIVFVLIFQLRIVAGLTSGAVKG
Mb1269|M.bovis_AF2122/97            QFEEPTGSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVKG
Rv1237|M.tuberculosis_H37Rv         QFEEPTGSIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVKG
MLBr_01088|M.leprae_Br4923          QFEEPTGSIAAGAIVITAPIIVFVWIFQRRIVAGLTSGAVKG
MAV_1376|M.avium_104                QFEEPTGSIAAGAVVITVPVILFVLIFQRRIVAGLTSGAVKG
MSMEG_5059|M.smegmatis_MC2_155      QFEEPTGSIAAGAMVITIPIIIFVLIFQRRIVAGLTSGAVKG
TH_2867|M.thermoresistible__bu      QFEEPTGSIAAGAMVITIPIIVFVLIFQRRIVSGLTSGAVKG
MAB_1374|M.abscessus_ATCC_1997      QFEEPTGSIAAGAIVITVPIIIFVLIFQRRIVAGLTSGAVKG
Mvan_2542|M.vanbaalenii_PYR-1       YFESPVPYIMAASVIVTIPVVILVLIFQRRIVAGLTSGAVKG
Mflv_3853|M.gilvum_PYR-GCK          YFESPVPYIMAASVIVTIPVVILVLVFQRRIVAGLTSGAVKG
                                     **.*.  * *.::::* *::::* :** ***:*********

species	id	gene	e-value	identity (len)	annotation
M. vanbaalenii PYR-1	Mvan_2542	-	-	100% (275)	binding-protein-dependent transport systems inner membrane component
M. vanbaalenii PYR-1	Mvan_2622	-	2e-31	31.02% (274)	binding-protein-dependent transport systems inner membrane
M. vanbaalenii PYR-1	Mvan_3390	-	9e-18	22.69% (260)	binding-protein-dependent transport systems inner membrane