For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSVLSGLRARAAKAWPFEFLPAASWSAQPPTYQDANPAVIDTALQRTLGRPGGNWFVIAASADITTKAFG TSVAGRELVAWRGSDGALLVAPRACPHLGADLATAPVDCGTLVCPWHGLRLGERRHGAWKPYPAHDDGVL CWVRLDDLDTGASAPTEQPVIPLRPGEPALAAVTRMEGVCEPRDIVANRLDPWHGAWFHPYSFSRLRVLS APPAEDGLAQDLDRFVVEVTFHIGRLGVPVIAEFTTPGPRTVVMHIVEGEGRGSVVETHATPLGPGVDGR PRTAVIEAVIAHSDRPHFGAGLVAAPLIRPLMRHAAGRLWRDDLAYAERLFEQRS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1581 | - | - | 100% (335) | Rieske (2Fe-2S) domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_3784 | - | 2e-05 | 35.29% (85) | Rieske (2Fe-2S) domain-containing protein |
| M. vanbaalenii PYR-1 | Mvan_2012 | - | 2e-05 | 34.15% (82) | Rieske (2Fe-2S) domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1843 | - | 1e-118 | 60.61% (330) | Rieske (2Fe-2S) domain-containing protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0726 | - | 6e-09 | 42.35% (85) | hypothetical protein MAB_0726 |
| M. marinum M | MMAR_3971 | - | 1e-07 | 26.24% (202) | oxidoreductase |
| M. avium 104 | MAV_3891 | - | 1e-114 | 61.35% (326) | methylesterase |
| M. smegmatis MC2 155 | MSMEG_2343 | - | 1e-112 | 59.94% (327) | methylesterase |
| M. thermoresistible (build 8) | TH_1484 | - | 1e-124 | 64.88% (336) | methylesterase |
| M. ulcerans Agy99 | MUL_3829 | - | 6e-07 | 27.50% (200) | oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_3891|M.avium_104 MNIRAQLRHLRPSVRAKDWPLQVIPRTPWADQRPTFREAQPAVIDAALQR
MSMEG_2343|M.smegmatis_MC2_155 MKIGDR--------WPKDWPLQLISSPRWSEQRPTYGEAKPAIIEAALRR
TH_1484|M.thermoresistible__bu MSIAANLR----SRWAKTVPFQVLPPLRWAAQRPTFRAAEPAVIAGALTR
Mvan_1581|M.vanbaalenii_PYR-1 MSVLSGLR----ARAAKAWPFEFLPAASWSAQPPTYQDANPAVIDTALQR
Mflv_1843|M.gilvum_PYR-GCK MSALGRLT----HSVKKAWPFEVLPRTAWARQSPTVGQASPQLIEAALAR
MMAR_3971|M.marinum_M ----------------------MAPSTSNSASSSAEEHSEQEFGPSGIAL
MUL_3829|M.ulcerans_Agy99 ----------------------MAPSTSNSASNSAEELSEQEFGPSGIAL
MAB_0726|M.abscessus_ATCC_1997 -----------------------MPKPPLSMR------------------
. :
MAV_3891|M.avium_104 CRRQPTGNWYAFAASTHVERGRPLGARVAGVDLVAWRDARGALCVGPRSC
MSMEG_2343|M.smegmatis_MC2_155 SQRRPTGNWYVLGANREIRADRPFGTTIGGIEVVAWRDRQGHLRVGPRSC
TH_1484|M.thermoresistible__bu SQRRPGGNWFAFAAADRIG-DRPLGTRVGGVELVAWRGADGTLRVGPGAC
Mvan_1581|M.vanbaalenii_PYR-1 TLGRPGGNWFVIAASADIT-TKAFGTSVAGRELVAWRGSDGALLVAPRAC
Mflv_1843|M.gilvum_PYR-GCK SQARPSGNWYVIAAGADVG-AKPVGATVAGAELVCWRGADGEVHAGPASC
MMAR_3971|M.marinum_M SPYRFPTGWFIVAFSSELGAGEVKRVHYFGEELVLFRTASGRVHALDAYC
MUL_3829|M.ulcerans_Agy99 SPYRFPTGWFIVAFSSELGAGEVKRVHSFGEELVLFRTASGRVHALDAYC
MAB_0726|M.abscessus_ATCC_1997 -----PTGWFQVAWSAQITVGAVHRMSYFGREMVAWRAQSGELAVMDAHC
.*: .. : * ::* :* * : . *
MAV_3891|M.avium_104 PHLGADLATG-TVCGGTLICRWHGLPLDG---------------RAREFG
MSMEG_2343|M.smegmatis_MC2_155 PHLGADLATG-VVDDGSLICRWHGLPLTG---------------KTCEFG
TH_1484|M.thermoresistible__bu PHLGADLSTG-RVDHGTLVCPWHGLRLDG---------------GCREFG
Mvan_1581|M.vanbaalenii_PYR-1 PHLGADLATA-PVDCGTLVCPWHGLRLG----------------ERRHGA
Mflv_1843|M.gilvum_PYR-GCK PHLGADLCTG-TVDRGQLVCPWHGLRLTG---------------RSRP-D
MMAR_3971|M.marinum_M QHLGANLGVGGTVEGEHIVCPWHGWQWRGDGTNALIPYSKIGCKNNVGIR
MUL_3829|M.ulcerans_Agy99 QHLGANLGVGGTVEGEHIVCPWHGWQWRGDGTNALIPYSKIGCKKNVRIR
MAB_0726|M.abscessus_ATCC_1997 EHLGAHLGHGGHVEGDRIVCPFHGWEWNRDGRNVCIPYERR-PNPLRRIR
****.* . * ::* :**
MAV_3891|M.avium_104 WAPVPSHDDGTLAWVRLDAV--GGETPSPRPVIPPR------PAGHTLAS
MSMEG_2343|M.smegmatis_MC2_155 WAPLPSHDDGVLAWVRLDEL--GGEDPLTVPVVPTR------PAGETLHA
TH_1484|M.thermoresistible__bu WSPYPSHDDGVLAWVRLDRV--GGENPTDRPVPAPR------PAGVRLAA
Mvan_1581|M.vanbaalenii_PYR-1 WKPYPAHDDGVLCWVRLDDLDTGASAPTEQPVIPLR------PGEPALAA
Mflv_1843|M.gilvum_PYR-GCK WPSVPTFDDGVLVWARLDRI--GGEAPTEAPIVPVR------PEAPTIAA
MMAR_3971|M.marinum_M SYPSIQWYGFILVWHERHGRPPYWEPP-VLPELETN----EYYPLHPHTR
MUL_3829|M.ulcerans_Agy99 SYPSIQWYGFILVWQERHGRPPYWQPP-VLPELETN----EYYSLHPHTR
MAB_0726|M.abscessus_ATCC_1997 SYPVVERNEAVYIWHDTAGRPPYFDVPDVFTGFGDGGSARDYYPGYPHST
. * . * .
MAV_3891|M.avium_104 VAHLVGVCEPADIIANRLDPWHGAWFHPYSFTRLEVLATPTE------EA
MSMEG_2343|M.smegmatis_MC2_155 LTRLVGVCEPSDIIANRLDPWHGNWFHPYSFTRLEVLSTPTE------ED
TH_1484|M.thermoresistible__bu VTRLVGRCEPHDIIANRLDPWHGAWFHPYSFTRLEVVSAPPPGIEVPPEE
Mvan_1581|M.vanbaalenii_PYR-1 VTRMEGVCEPRDIVANRLDPWHGAWFHPYSFSRLRVLSAPPAEDGLAQDL
Mflv_1843|M.gilvum_PYR-GCK VTTLHGACEAVDIIANRMDPWHGGWFHPYSFTKLDVLSAPGEDGDIPEEL
MMAR_3971|M.marinum_M MLNR-VKVHPQMIIENAADPYHVQYVHKAASPANTASFEVSGYHLHATVN
MUL_3829|M.ulcerans_Agy99 MLNR-VKVHPQMIIENAADPYHVQYVHKAASPANTASFEVSGYHLHATVN
MAB_0726|M.abscessus_ATCC_1997 LYRERLQLHPQYVLENGVDFAHFKYVHKTPFIPRFTRQEFG----TPISY
: .. :: * * * :.* . .
MAV_3891|M.avium_104 DRFLVAVTFRMGRLGVPVVAEFDCP----------------EARTIVMRI
MSMEG_2343|M.smegmatis_MC2_155 DRFLLSVTFRLGRLGVPVVAEFTCP----------------SARTIVMRI
TH_1484|M.thermoresistible__bu DRFLVAVTFRMGRLGVPVIAEFTAP----------------GPRTIVMRI
Mvan_1581|M.vanbaalenii_PYR-1 DRFVVEVTFHIGRLGVPVIAEFTTP----------------GPRTVVMHI
Mflv_1843|M.gilvum_PYR-GCK DRFLVAVTFRIGRLGVPVIAEFTSP----------------EPRTLVMRI
MMAR_3971|M.marinum_M ANFGGGRTKTWLTPNGPVDAKIIYDNYSLGLGIVRFPSELVATVQVTGQT
MUL_3829|M.ulcerans_Agy99 ANFGGGRTKTWLTPNGPVDAKIVYDNYSLGLGIVRFPSELVATVQVTGQT
MAB_0726|M.abscessus_ATCC_1997 VDFTIAFDEIPGMSAEDIKSGVQAINGGLGVAVTKS-WGMVDNRTVSAVT
* : : . :
MAV_3891|M.avium_104 VDGEGTGSVVETHATPIGSGPDGR---PRTAVLEAVIAHSDRPGFARALW
MSMEG_2343|M.smegmatis_MC2_155 VDGEGAGSIVETHATPLGPGTDGR---PRTAVVEAVVAQSDRAGFRHARR
TH_1484|M.thermoresistible__bu VDGEGAGSVVETHATPIGPGADGA---PRTAVLEAVVAHSNRPNFVHALR
Mvan_1581|M.vanbaalenii_PYR-1 VEGEGRGSVVETHATPLGPGVDGR---PRTAVIEAVIAHSDRPHFGAGLV
Mflv_1843|M.gilvum_PYR-GCK VDGEGTGSVVETHATPQGYDRDGR---PRATVTEAVVAHSDRPGFARAMR
MMAR_3971|M.marinum_M PVDEDYTDYFYTQASIREPGDAGDVPTGRAARFLALQQEVIKQDFFTWEN
MUL_3829|M.ulcerans_Agy99 PVDEDYTDYFYTQASIRELGDAGDVPTGRAARFLALQQEVIKQDFFTWEN
MAB_0726|M.abscessus_ATCC_1997 PVDDETCDVRFTVFIGRQPGDDSAEPPQSAKTFAQAIIDQFLADIHIWSH
.: . * . . : . :
MAV_3891|M.avium_104 AAPLLTPVMRYAAGRLWRDDLAYAERRYEVRSQ---------------NH
MSMEG_2343|M.smegmatis_MC2_155 AAALITPLMRHAANRLWRDDLVYAERRYQIRHH---------------QR
TH_1484|M.thermoresistible__bu GAALIRPLMRRAATRLWRDDLAYAERLYRLRAD---------------RR
Mvan_1581|M.vanbaalenii_PYR-1 AAPLIRPLMRHAAGRLWRDDLAYAERLFEQRS------------------
Mflv_1843|M.gilvum_PYR-GCK VAPMITPFMRHAANRLWRDDLVYAERLQTVREQKASGAADLLRPLPEPTR
MMAR_3971|M.marinum_M MKYLEKPNLAPEEARDYAALRRWAHRFYPAAQTSTADFG--------YTA
MUL_3829|M.ulcerans_Agy99 MKYLEKPYLAPEEARDYAALRRWAHRFYPGAQTSPADFG--------YTA
MAB_0726|M.abscessus_ATCC_1997 QRYSDPPALVRAEYEGFIALRKWATQFYPEESTA----------------
* : . : :* :
MAV_3891|M.avium_104 ----------------
MSMEG_2343|M.smegmatis_MC2_155 DHRRTTGQGP------
TH_1484|M.thermoresistible__bu GGAAGSADGAGVVQ--
Mvan_1581|M.vanbaalenii_PYR-1 ----------------
Mflv_1843|M.gilvum_PYR-GCK GDRQPPAAAPGSAPTD
MMAR_3971|M.marinum_M DGLPDPAASKA-----
MUL_3829|M.ulcerans_Agy99 DGLPDPAASKA-----
MAB_0726|M.abscessus_ATCC_1997 ----------------