For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSSDTKGEGVGVITDWAGGYVKRHPLASLTTVGDQFVLGVRTVQYFLLDLFSGRFQWQEFIRQGAFMAGT AVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLTAAILMAAAVGSAITADLGSRT MREETDAMEVMGVSVIRRLVVPRFAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFAT TGDMIVALVKAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMVVNVAISQLYIMMFPRVG L
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0957 | - | - | 100% (281) | hypothetical protein Mvan_0957 |
M. vanbaalenii PYR-1 | Mvan_0498 | - | 1e-47 | 39.34% (244) | hypothetical protein Mvan_0498 |
M. vanbaalenii PYR-1 | Mvan_4606 | - | 1e-46 | 38.39% (224) | hypothetical protein Mvan_4606 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0173 | yrbE1A | 2e-48 | 38.58% (254) | integral membrane protein YRBE1A |
M. gilvum PYR-GCK | Mflv_0012 | - | 1e-138 | 91.67% (276) | hypothetical protein Mflv_0012 |
M. tuberculosis H37Rv | Rv0167 | yrbE1A | 2e-48 | 38.58% (254) | integral membrane protein YRBE1A |
M. leprae Br4923 | MLBr_02587 | yrbE1A | 5e-47 | 41.44% (222) | hypothetical protein MLBr_02587 |
M. abscessus ATCC 19977 | MAB_1012c | - | 1e-129 | 83.58% (274) | putative YrbE family protein |
M. marinum M | MMAR_3862 | yrbE5A | 1e-131 | 86.13% (274) | YrbE family protein, YrbE5A |
M. avium 104 | MAV_2390 | - | 1e-130 | 84.67% (274) | hypothetical protein MAV_2390 |
M. smegmatis MC2 155 | MSMEG_1141 | - | 1e-135 | 90.84% (273) | ABC-transporter integral membrane protein |
M. thermoresistible (build 8) | TH_2930 | - | 1e-138 | 89.53% (277) | PUTATIVE protein of unknown function DUF140 |
M. ulcerans Agy99 | MUL_3794 | yrbE5A | 1e-130 | 85.04% (274) | YrbE family protein, YrbE5A |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_0957|M.vanbaalenii_PYR-1 -------------------------------MSSDTKGEG------VGVI MSMEG_1141|M.smegmatis_MC2_155 -----------------------------MTTSPDRVSDGGAPERGTDAI Mflv_0012|M.gilvum_PYR-GCK MRLPGPRTRCGRRHRRSECTAAERTSGMTTADQPVRRDDS------VHAV TH_2930|M.thermoresistible__bu ----------------------------------MTRSDG------VEVI MMAR_3862|M.marinum_M -----------------------------MTTQPEPALLGSRNDDGVAAI MUL_3794|M.ulcerans_Agy99 -----------------------------MTTQPEPALLGSRNDDGVAAI MAV_2390|M.avium_104 -----------------------------MTATLTTPLDG---VDGVAAI MAB_1012c|M.abscessus_ATCC_199 -----------------------------MTTQDERRATN----DGVAAI Mb0173|M.bovis_AF2122/97 -----------------------------MTTST---------------- Rv0167|M.tuberculosis_H37Rv -----------------------------MTTST---------------- MLBr_02587|M.leprae_Br4923 -----------------------------MTTETRS-------------- Mvan_0957|M.vanbaalenii_PYR-1 TDWAGGYVKRHPLASLTTVGDQFVLGVRTVQYFLLDLFSGRFQWQEFIRQ MSMEG_1141|M.smegmatis_MC2_155 EKWATGYVRRHPIASLTTVGDQFVLGVRTVQYLFTELFTGRFQWQEFIRQ Mflv_0012|M.gilvum_PYR-GCK QDWVGGYVRRHPLASLATVGDQFVLGVRTLQWFFVDLFTGRFQFQEFVRQ TH_2930|M.thermoresistible__bu GEWAGGYIRRHPLAALGTVGEQFVLGVRTLQYLFVDLFTGRFQWWEFVRQ MMAR_3862|M.marinum_M GDWAAGYVRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRFQWQEFVRQ MUL_3794|M.ulcerans_Agy99 GDWAAGYIRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRFQWQEFVRQ MAV_2390|M.avium_104 RNWSVGYVKRHPVASLTTVGEQFVLGVRTIQYFFYDLITGRFQWQEFVRQ MAB_1012c|M.abscessus_ATCC_199 QDWTTGYVKRHPLESLKTVGEQFMLGVRTIQWFFVDLFTGNFQWQEFVRQ Mb0173|M.bovis_AF2122/97 --TLGGYVRDQLQTPLTLVGGFFRMCVLTGK----ALFRWPFQWREFILQ Rv0167|M.tuberculosis_H37Rv --TLGGYVRDQLQTPLTLVGGFFRMCVLTGK----ALFRWPFQWREFILQ MLBr_02587|M.leprae_Br4923 --SLVEYAHTKLQTPLVLVGGFFRMLVLTGK----ALFRRPFQWREFILQ * : : .* ** * : * * : *. **: **: * Mvan_0957|M.vanbaalenii_PYR-1 GAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIR MSMEG_1141|M.smegmatis_MC2_155 GAFMASTAVVPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIR Mflv_0012|M.gilvum_PYR-GCK GAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIR TH_2930|M.thermoresistible__bu AAFMAGTAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIR MMAR_3862|M.marinum_M GAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIR MUL_3794|M.ulcerans_Agy99 GAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIR MAV_2390|M.avium_104 GAFMAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIR MAB_1012c|M.abscessus_ATCC_199 GAFQAGTAVVPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIR Mb0173|M.bovis_AF2122/97 CWFIMRVGFLPTIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT Rv0167|M.tuberculosis_H37Rv CWFIMRVGFLPTIMVSIPLTVLLIFTLNILLAQFGAADISGSGAAIGAVT MLBr_02587|M.leprae_Br4923 CWFIMRVAFLPTVMVSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVT * ...:*.::*::*: * * : : :* .*..*:.::*:.:.:. : Mvan_0957|M.vanbaalenii_PYR-1 QAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPR MSMEG_1141|M.smegmatis_MC2_155 QAASLTAAVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRLVVPR Mflv_0012|M.gilvum_PYR-GCK QAASLTAAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRLVVPR TH_2930|M.thermoresistible__bu QAASLTAAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPR MMAR_3862|M.marinum_M QGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPR MUL_3794|M.ulcerans_Agy99 QGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRLVVPR MAV_2390|M.avium_104 QGASLVAAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRLVVPR MAB_1012c|M.abscessus_ATCC_199 QAASLVAALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPR Mb0173|M.bovis_AF2122/97 QLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPR Rv0167|M.tuberculosis_H37Rv QLGPLTTVLVVAGAGSTAICADLGARTIREEIDAMEVLGIDPIHRLVVPR MLBr_02587|M.leprae_Br4923 QLGPLTTVLVVAGAGSTSICADLGARTIREEIDAMEVLGIDPIHRLVVPR * ..*.:.::::.* .::* ****:*.:*** *****:*:. ::****** Mvan_0957|M.vanbaalenii_PYR-1 FAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGD MSMEG_1141|M.smegmatis_MC2_155 FAAAIMIGVALTGVVCFVGFIASFLFNVYFQDGAPGSFVATFASFATTGD Mflv_0012|M.gilvum_PYR-GCK FAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGD TH_2930|M.thermoresistible__bu FAAAIMIGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFTTTGD MMAR_3862|M.marinum_M FAAAIMIGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDD MUL_3794|M.ulcerans_Agy99 FAAAIMIGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDD MAV_2390|M.avium_104 FAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSASFATTGD MAB_1012c|M.abscessus_ATCC_199 FAAAIMIGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGD Mb0173|M.bovis_AF2122/97 VLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPE Rv0167|M.tuberculosis_H37Rv VLASMLVATLLNGLVITVGLVGGFLFGVYLQNVSGGAYLATLTLITGLPE MLBr_02587|M.leprae_Br4923 VLAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLPE . *: ::. *.*:* .*:...::*.** *: : *::::* : :: : Mvan_0957|M.vanbaalenii_PYR-1 MIVALVKAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMV MSMEG_1141|M.smegmatis_MC2_155 MIVALIKAVIFGAIVAVVSCQKGLSTVGGPTGVANSVNAAVVESILLLMV Mflv_0012|M.gilvum_PYR-GCK MIVALVKAVIFGAIVAIVSCQKGLSTQGGPTGVANSVNAAVVESILVLMV TH_2930|M.thermoresistible__bu MLVALIKAVVFGAIVAVVSCQKGLSTKGGPTGVANSVNAAVVESILVLMI MMAR_3862|M.marinum_M MFLALFKAVIFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMI MUL_3794|M.ulcerans_Agy99 MFLALFKAVMFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMI MAV_2390|M.avium_104 MILALLKAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMI MAB_1012c|M.abscessus_ATCC_199 MILALIKAVIYGAIVAVVACQKGLSTKGGPIGVANSVNAAVVESILLLMT Mb0173|M.bovis_AF2122/97 VVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFA Rv0167|M.tuberculosis_H37Rv VVIATIKAATFGLIAGLVGCYRGLTVRGGSKGLGTAVNETVVLCVIALFA MLBr_02587|M.leprae_Br4923 VVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALYA :.:* .** :* *..:*.. :** . **. *:. :** :** .:: * Mvan_0957|M.vanbaalenii_PYR-1 VNVAISQLYIMMFPRVGL MSMEG_1141|M.smegmatis_MC2_155 VNVAISQLYIMLFPRVGL Mflv_0012|M.gilvum_PYR-GCK VNVAISQLYILMFPRVGL TH_2930|M.thermoresistible__bu VNVGISQLYIMLFPRVGL MMAR_3862|M.marinum_M VNVSISQLHVMLAPRTGL MUL_3794|M.ulcerans_Agy99 VNVSISQLHVMLAPRTGL MAV_2390|M.avium_104 VNVAISQLYIMLSPRTGL MAB_1012c|M.abscessus_ATCC_199 VNLAISQLYIMMFPRTGL Mb0173|M.bovis_AF2122/97 VNVILTTIGVRFG--TGR Rv0167|M.tuberculosis_H37Rv VNVILTTIGVRFG--TGR MLBr_02587|M.leprae_Br4923 VNVVLTTIGVRFG--TGH **: :: : : : .*