For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VASDVISKPVRAFGGFYSMALDTFVAMFQPPFAWREFISQAWFVARVSILPTLLLTIPYTVLLTFIETIL LTEIGASDFSGTGAALGTVRQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALVVPR VLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGLTLIIGATDVVIALVKAALFGLSAGLIAC YKGISVRGGPAGVGNAVNETVVFTFMALFAINIVATAVAIKITL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4606 | - | - | 100% (255) | hypothetical protein Mvan_4606 |
| M. vanbaalenii PYR-1 | Mvan_3984 | - | e-106 | 73.33% (255) | hypothetical protein Mvan_3984 |
| M. vanbaalenii PYR-1 | Mvan_0361 | - | e-104 | 73.79% (248) | hypothetical protein Mvan_0361 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3531c | yrbE4A | 3e-87 | 60.08% (248) | integral membrane protein YrbE4a |
| M. gilvum PYR-GCK | Mflv_2099 | - | 1e-126 | 89.80% (255) | hypothetical protein Mflv_2099 |
| M. tuberculosis H37Rv | Rv1964 | yrbE3A | 3e-91 | 67.34% (248) | integral membrane protein YrbE3A |
| M. leprae Br4923 | MLBr_02587 | yrbE1A | 1e-77 | 56.91% (246) | hypothetical protein MLBr_02587 |
| M. abscessus ATCC 19977 | MAB_4155c | - | 1e-83 | 59.11% (247) | hypothetical protein MAB_4155c |
| M. marinum M | MMAR_4049 | yrbE3A_1 | 1e-125 | 89.80% (255) | integral membrane protein YrbE3A_1 |
| M. avium 104 | MAV_2059 | - | 9e-92 | 62.06% (253) | TrnB1 protein |
| M. smegmatis MC2 155 | MSMEG_0344 | - | 1e-105 | 73.33% (255) | hypothetical protein MSMEG_0344 |
| M. thermoresistible (build 8) | TH_0179 | - | 1e-109 | 75.29% (255) | CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4A |
| M. ulcerans Agy99 | MUL_3916 | yrbE3A_1 | 1e-124 | 89.41% (255) | integral membrane protein YrbE3A_1 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4049|M.marinum_M MVAPV----------AVAKPLRAFGGFYSMALDTFVAMVHPPFAWREYIA
MUL_3916|M.ulcerans_Agy99 MVTPV----------AVAKPLRAFGGFYSMALDTFVAMVHPPFAWREYIA
Mvan_4606|M.vanbaalenii_PYR-1 MVASD----------VISKPVRAFGGFYSMALDTFVAMFQPPFAWREFIS
Mflv_2099|M.gilvum_PYR-GCK MVASG----------VIAKPMRAFGGFFSMALDTFVAMVKPPFAWREFIS
MSMEG_0344|M.smegmatis_MC2_155 MIALG----------PAAKPVGALGGFFAMTLDVFITIARPPFAWREYLN
Rv1964|M.tuberculosis_H37Rv MVIVADK-AAGRVADPVLRPVGALGDFFAMTLDTSVCMFKPPFAWREYLL
TH_0179|M.thermoresistible__bu MVLAP---------QPVTEPVRAVGGFFAMSLDTFVQMFRPPFAWREYVH
MAV_2059|M.avium_104 MNATA-----------IAKPMTALGQFFLLSAEALAAAVRGPWAWREILE
Mb3531c|M.bovis_AF2122/97 ------------MIQQLAVPARAVGGFFEMSMDTARAAFRRPFQFREFLD
MAB_4155c|M.abscessus_ATCC_199 ------------MKQQLAAPARAVGGFVSMSLATFRNIFRRPFQGQEFLD
MLBr_02587|M.leprae_Br4923 MTTETRSSLVEYAHTKLQTPLVLVGGFFRMLVLTGKALFRRPFQWREFIL
* .* * : . : *: :* :
MMAR_4049|M.marinum_M QAWFVARVSLLPTLMLTIPYTVLLTFIENILLTEIGAADFSGTGAALGSV
MUL_3916|M.ulcerans_Agy99 QAWFVARVSLLPTLMLTIPYTVLLTFIENILLTEIGAADFSGTGAALGSV
Mvan_4606|M.vanbaalenii_PYR-1 QAWFVARVSILPTLLLTIPYTVLLTFIETILLTEIGASDFSGTGAALGTV
Mflv_2099|M.gilvum_PYR-GCK QSWFVARVSIVPTLMLTIPYTVLLTFTFNILLTEFGAADFSGTGAALGTV
MSMEG_0344|M.smegmatis_MC2_155 QTWFVARVSLVPALMLTVPYTVLLVFTFNILLIEFGAADFSGTGAAIGTV
Rv1964|M.tuberculosis_H37Rv QCWFVARVSTLPGVLMTIPWAVISGFLFNVLLTDIGAADFSGTGCAIFTV
TH_0179|M.thermoresistible__bu QSWFVARVSVVPALLLTMPYSVLLVFTFNVLLAEFGAADYSGTGAAIGTV
MAV_2059|M.avium_104 QIWFVARVSIFPTIMLSIPYTVLIVFVLNILLVEIGAGDLSGAGAGLASV
Mb3531c|M.bovis_AF2122/97 QTWMVARVSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTI
MAB_4155c|M.abscessus_ATCC_199 QTWFIARVSLLPTLLVAIPFTVLVAFTLNILLREIGAADLSGAATAFGTV
MLBr_02587|M.leprae_Br4923 QCWFIMRVAFLPTVMVSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAV
* *:: **: .* :::::* :*: * .:** ::.*.* **:. .: ::
MMAR_4049|M.marinum_M RQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGVDPIQALVVP
MUL_3916|M.ulcerans_Agy99 RQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGVDPIQALVVP
Mvan_4606|M.vanbaalenii_PYR-1 RQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALVVP
Mflv_2099|M.gilvum_PYR-GCK RQIGPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGVNPIQALVVP
MSMEG_0344|M.smegmatis_MC2_155 SQIGPIVTVLVVAGAGSTAMCADLGARTIREELDAMRVMGIDPIQALVVP
Rv1964|M.tuberculosis_H37Rv NQSAPIVTVLVVAGAGATAMCADLGARTIREELDALRVMGINPIQALAAP
TH_0179|M.thermoresistible__bu NQIGPIVTVLVVSGAGATAMCADLGARTIREELDALRVMGINPIQALVVP
MAV_2059|M.avium_104 TQVGPVVTAMVVSGAGSTAMCADLGARTIREEIDAMKVIGVNPVQALVVP
Mb3531c|M.bovis_AF2122/97 TQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVP
MAB_4155c|M.abscessus_ATCC_199 TQLGPVVTVLVVAGAGATAICADLGARTIREEIDAMQVLGIDPIQRLVVP
MLBr_02587|M.leprae_Br4923 TQLGPLTTVLVVAGAGSTSICADLGARTIREEIDAMEVLGIDPIHRLVVP
* .*:.*.:**:***:*::************:**:.*:*::*:: *..*
MMAR_4049|M.marinum_M RVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLIIGTT
MUL_3916|M.ulcerans_Agy99 RVLAATTVSLALSASVILVGLSGAYFFCVFIQHVSPGAFAAGLTLIIGTT
Mvan_4606|M.vanbaalenii_PYR-1 RVLAAMVVSLALSATVILVGLSGAYFFVVYIQDVSPGAFAAGLTLIIGAT
Mflv_2099|M.gilvum_PYR-GCK RVLAATLVSLALSATVILVGLAGAYFFCVYIQNVSPGAFAAGLTLIIGAT
MSMEG_0344|M.smegmatis_MC2_155 RVLAATTVALALSATVIIVGLAGGFVFAVFIQHVPPGSFVAGLTVLTHGA
Rv1964|M.tuberculosis_H37Rv RVLAATTVSLALNSVVTATGLIGAFFCSVFLMHVSAGAWVTGLTTLTHTV
TH_0179|M.thermoresistible__bu RVLAATTVSLALASTVILVGLVGAFFFVVYVQHVSAGAFVTGLTLMTGAA
MAV_2059|M.avium_104 RIIAATFVAVMLYAVVAVTGLTGSYIFVVFVQHVTPGAFVAGMTLVTGLP
Mb3531c|M.bovis_AF2122/97 RVLASTLVALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLR
MAB_4155c|M.abscessus_ATCC_199 RVLASTFVALLLNGLVCAIGMVGGYVFSVFLQGVNPGAFINGLTVLTGLG
MLBr_02587|M.leprae_Br4923 RVLAATLVATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLP
*::*: *: * . * *: *.: *:: * *:: :* :
MMAR_4049|M.marinum_M DVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF
MUL_3916|M.ulcerans_Agy99 DVVIALVKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF
Mvan_4606|M.vanbaalenii_PYR-1 DVVIALVKAALFGLSAGLIACYKGISVRGGPAGVGNAVNETVVFTFMALF
Mflv_2099|M.gilvum_PYR-GCK DVIIALVKAALFGLSAGMIACYKGISVGGGPAGVGNAVNETVVFTFMALF
MSMEG_0344|M.smegmatis_MC2_155 DVAVALAKAALFGLSAGLIACYKGISVGGGPAGVGNAVNETVVFTFMALF
Rv1964|M.tuberculosis_H37Rv DVVISMIKATLFGLMAGLIACYKGMSVGGGPAGVGRAVNETVVFAFIVLF
TH_0179|M.thermoresistible__bu DVIVSLVKATLFGMAAGLIACYKGISVGGGPAGVGNAVNETVVFSFMVLF
MAV_2059|M.avium_104 QVVISLIKATLFGLSAGLIACYKGLSVGGGPTGVGNAVNETVVFSFMALF
Mb3531c|M.bovis_AF2122/97 ELILAEIKALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLF
MAB_4155c|M.abscessus_ATCC_199 ELMISEVKAFLFGIFAGLVGCYRGLTVKGGPKGVGDAVNETVVYAFICLF
MLBr_02587|M.leprae_Br4923 EVVIATVKAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALY
:: :: ** **: **::.**:*: * **. *:* ******* .: *:
MMAR_4049|M.marinum_M AINIVATAVAIKVTL--
MUL_3916|M.ulcerans_Agy99 AINIVATAVAIKVTL--
Mvan_4606|M.vanbaalenii_PYR-1 AINIVATAVAIKITL--
Mflv_2099|M.gilvum_PYR-GCK AINIVATAVAVKVTM--
MSMEG_0344|M.smegmatis_MC2_155 AINVIATAVGVKITVV-
Rv1964|M.tuberculosis_H37Rv VINIVVTAVGIPFMVS-
TH_0179|M.thermoresistible__bu AINIVVTAVGIQFTV--
MAV_2059|M.avium_104 FINILTTALGVKVTAK-
Mb3531c|M.bovis_AF2122/97 VINVVMTAIGVRISAQ-
MAB_4155c|M.abscessus_ATCC_199 VINVVMTAIGVRVLVKH
MLBr_02587|M.leprae_Br4923 AVNVVLTTIGVRFGTGH
:*:: *::.: .