For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TATLTTPLDGVDGVAAIRNWSVGYVKRHPVASLTTVGEQFVLGVRTIQYFFYDLITGRFQWQEFVRQGAF MAGTAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLVAAVLMASAVGSAITADL GSRTMREETDAMEVMGVSVVRRLVVPRFAAAVMIGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSA SFATTGDMILALLKAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAISQLYIMLS PRTGL*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_2390 | - | - | 100% (286) | hypothetical protein MAV_2390 |
| M. avium 104 | MAV_5054 | - | 2e-46 | 40.17% (229) | ABC transporter integral membrane protein |
| M. avium 104 | MAV_5017 | - | 4e-46 | 38.58% (254) | hypothetical protein MAV_5017 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3531c | yrbE4A | 3e-45 | 38.29% (222) | integral membrane protein YrbE4a |
| M. gilvum PYR-GCK | Mflv_0012 | - | 1e-128 | 81.98% (283) | hypothetical protein Mflv_0012 |
| M. tuberculosis H37Rv | Rv3501c | yrbE4A | 4e-45 | 38.29% (222) | integral membrane protein YrbE4a |
| M. leprae Br4923 | MLBr_02587 | yrbE1A | 7e-43 | 37.79% (217) | hypothetical protein MLBr_02587 |
| M. abscessus ATCC 19977 | MAB_1012c | - | 1e-126 | 81.75% (274) | putative YrbE family protein |
| M. marinum M | MMAR_3862 | yrbE5A | 1e-137 | 90.15% (274) | YrbE family protein, YrbE5A |
| M. smegmatis MC2 155 | MSMEG_1141 | - | 1e-127 | 83.52% (273) | ABC-transporter integral membrane protein |
| M. thermoresistible (build 8) | TH_2930 | - | 1e-128 | 84.31% (274) | PUTATIVE protein of unknown function DUF140 |
| M. ulcerans Agy99 | MUL_3794 | yrbE5A | 1e-136 | 89.42% (274) | YrbE family protein, YrbE5A |
| M. vanbaalenii PYR-1 | Mvan_0957 | - | 1e-130 | 84.67% (274) | hypothetical protein Mvan_0957 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3862|M.marinum_M -----------------------MTTQPEPALLGSRNDDGVAAIGDWAAG
MUL_3794|M.ulcerans_Agy99 -----------------------MTTQPEPALLGSRNDDGVAAIGDWAAG
MAV_2390|M.avium_104 -----------------------MTATLTTPLDG---VDGVAAIRNWSVG
Mflv_0012|M.gilvum_PYR-GCK MRLPGPRTRCGRRHRRSECTAAERTSGMTTADQPVRRDDSVHAVQDWVGG
TH_2930|M.thermoresistible__bu ----------------------------------MTRSDGVEVIGEWAGG
MSMEG_1141|M.smegmatis_MC2_155 -----------------------MTTSPDRVSDGGAPERGTDAIEKWATG
Mvan_0957|M.vanbaalenii_PYR-1 -------------------------MSSDTKGEG------VGVITDWAGG
MAB_1012c|M.abscessus_ATCC_199 -----------------------MTTQDERRATN----DGVAAIQDWTTG
Mb3531c|M.bovis_AF2122/97 --------------------------------------------------
Rv3501c|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_02587|M.leprae_Br4923 ---------------------------------------MTTETRSSLVE
MMAR_3862|M.marinum_M YVRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRFQWQEFVRQGAFMAG
MUL_3794|M.ulcerans_Agy99 YIRRHPLAALTTVGEQFVLGVRTIQYFFVDLVTGRFQWQEFVRQGAFMAG
MAV_2390|M.avium_104 YVKRHPVASLTTVGEQFVLGVRTIQYFFYDLITGRFQWQEFVRQGAFMAG
Mflv_0012|M.gilvum_PYR-GCK YVRRHPLASLATVGDQFVLGVRTLQWFFVDLFTGRFQFQEFVRQGAFMAG
TH_2930|M.thermoresistible__bu YIRRHPLAALGTVGEQFVLGVRTLQYLFVDLFTGRFQWWEFVRQAAFMAG
MSMEG_1141|M.smegmatis_MC2_155 YVRRHPIASLTTVGDQFVLGVRTVQYLFTELFTGRFQWQEFIRQGAFMAS
Mvan_0957|M.vanbaalenii_PYR-1 YVKRHPLASLTTVGDQFVLGVRTVQYFLLDLFSGRFQWQEFIRQGAFMAG
MAB_1012c|M.abscessus_ATCC_199 YVKRHPLESLKTVGEQFMLGVRTIQWFFVDLFTGNFQWQEFVRQGAFQAG
Mb3531c|M.bovis_AF2122/97 -MIQQLAVPARAVGGFFEMSMDTAR----AAFRRPFQFREFLDQTWMVAR
Rv3501c|M.tuberculosis_H37Rv -MIQQLAVPARAVGGFFEMSMDTAR----AAFRRPFQFREFLDQTWMVAR
MLBr_02587|M.leprae_Br4923 YAHTKLQTPLVLVGGFFRMLVLTGK----ALFRRPFQWREFILQCWFIMR
: . ** * : : * : . **: **: * :
MMAR_3862|M.marinum_M TAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLV
MUL_3794|M.ulcerans_Agy99 TAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLV
MAV_2390|M.avium_104 TAVLPTILVSLPISVTLSIQFALLAGQVGATSLAGAASGLAVIRQGASLV
Mflv_0012|M.gilvum_PYR-GCK TAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLT
TH_2930|M.thermoresistible__bu TAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLT
MSMEG_1141|M.smegmatis_MC2_155 TAVVPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLT
Mvan_0957|M.vanbaalenii_PYR-1 TAVLPTVLVALPIGVTLSIQFALLAGQVGATSLAGAASGLAVIRQAASLT
MAB_1012c|M.abscessus_ATCC_199 TAVVPVILVTLPIGVTLSIQFALLAGQVGATSLAGAASGIAIIRQAASLV
Mb3531c|M.bovis_AF2122/97 VSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVV
Rv3501c|M.tuberculosis_H37Rv VSLVPTLLVSIPFTVLVAFTLNILLREIGAADLSGAGTAFGTITQLGPVV
MLBr_02587|M.leprae_Br4923 VAFLPTVMVSIPLTVLLIFTLNVLLAQFSAADLSGAGAAIGAVTQLGPLT
.:.:*.::*::*: * : : : :* :..*:.*:**.:.:. : * ..:.
MMAR_3862|M.marinum_M AAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIM
MUL_3794|M.ulcerans_Agy99 AAVLMASAVGSAITADLGSRTMREETDAMEVMGLSVIRRLVVPRFAAAIM
MAV_2390|M.avium_104 AAVLMASAVGSAITADLGSRTMREETDAMEVMGVSVVRRLVVPRFAAAVM
Mflv_0012|M.gilvum_PYR-GCK AAILMAAAVGSAITADLGSRKMREETDAMEVMGVSVIRRLVVPRFAAAIM
TH_2930|M.thermoresistible__bu AAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIM
MSMEG_1141|M.smegmatis_MC2_155 AAVLMAAAVGSAITADLGSRKMREETDAMEVMGVSVIKRLVVPRFAAAIM
Mvan_0957|M.vanbaalenii_PYR-1 AAILMAAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIM
MAB_1012c|M.abscessus_ATCC_199 AALLMSAAVGSAITADLGSRTMREETDAMEVMGVSVIRRLVVPRFAAAIM
Mb3531c|M.bovis_AF2122/97 TVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTL
Rv3501c|M.tuberculosis_H37Rv TVLVVAGAGATAICADLGARTIREEIDAMRVLGIDPIQRLVVPRVLASTL
MLBr_02587|M.leprae_Br4923 TVLVVAGAGSTSICADLGARTIREEIDAMEVLGIDPIHRLVVPRVLAATL
:.::::.* .::* ****:*.:*** ***.*:*:. ::******. *: :
MMAR_3862|M.marinum_M IGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALF
MUL_3794|M.ulcerans_Agy99 IGVALTGVVCFVGFFASYMFNVYFQNGAPGSFVATFASFATTDDMFLALF
MAV_2390|M.avium_104 IGVALTGVVCFAGFFASYMFNVYFQNGAPGSFVSTSASFATTGDMILALL
Mflv_0012|M.gilvum_PYR-GCK IGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV
TH_2930|M.thermoresistible__bu IGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFTTTGDMLVALI
MSMEG_1141|M.smegmatis_MC2_155 IGVALTGVVCFVGFIASFLFNVYFQDGAPGSFVATFASFATTGDMIVALI
Mvan_0957|M.vanbaalenii_PYR-1 IGVALTGVVCFVGFLASYLFNVYFQNGAPGSFVATFASFATTGDMIVALV
MAB_1012c|M.abscessus_ATCC_199 IGIALTGVVCFVGFLGAYLFNVYWQNGAPGSFVTTFSAFATPGDMILALI
Mb3531c|M.bovis_AF2122/97 VALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEI
Rv3501c|M.tuberculosis_H37Rv VALLLNGLVCAIGLSGGYAFSVFLQGVNPGAFINGLTVLTGLRELILAEI
MLBr_02587|M.leprae_Br4923 VATLLNGLVITVGLVGGYLFGVYLQNVSGGAYLATLTTITGLPEVVIATV
:. *.*:* *: ..: *.*: *. *::: : :: ::.:* .
MMAR_3862|M.marinum_M KAVIFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVSIS
MUL_3794|M.ulcerans_Agy99 KAVMFGAIVAVVSAQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVSIS
MAV_2390|M.avium_104 KAIVFGAIVAIVSSQKGLSTKGGPTGVANSVNAAVVEAILLLMIVNVAIS
Mflv_0012|M.gilvum_PYR-GCK KAVIFGAIVAIVSCQKGLSTQGGPTGVANSVNAAVVESILVLMVVNVAIS
TH_2930|M.thermoresistible__bu KAVVFGAIVAVVSCQKGLSTKGGPTGVANSVNAAVVESILVLMIVNVGIS
MSMEG_1141|M.smegmatis_MC2_155 KAVIFGAIVAVVSCQKGLSTVGGPTGVANSVNAAVVESILLLMVVNVAIS
Mvan_0957|M.vanbaalenii_PYR-1 KAVIFGAIVAVVSCQKGLATQGGPTGVANSVNAAVVESILLLMVVNVAIS
MAB_1012c|M.abscessus_ATCC_199 KAVIYGAIVAVVACQKGLSTKGGPIGVANSVNAAVVESILLLMTVNLAIS
Mb3531c|M.bovis_AF2122/97 KALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMT
Rv3501c|M.tuberculosis_H37Rv KALLFGVMAGLVGCYRGLTVKGGPKGVGNAVNETVVYAFICLFVINVVMT
MLBr_02587|M.leprae_Br4923 KAATFGLIAGLVGCYRGLIVRGGSNGLGAAVNETVVLCVVALYAVNVVLT
** :* :..:*.. :** . **. *:. :** :** ..: * :*: ::
MMAR_3862|M.marinum_M QLHVMLAPRTGL
MUL_3794|M.ulcerans_Agy99 QLHVMLAPRTGL
MAV_2390|M.avium_104 QLYIMLSPRTGL
Mflv_0012|M.gilvum_PYR-GCK QLYILMFPRVGL
TH_2930|M.thermoresistible__bu QLYIMLFPRVGL
MSMEG_1141|M.smegmatis_MC2_155 QLYIMLFPRVGL
Mvan_0957|M.vanbaalenii_PYR-1 QLYIMMFPRVGL
MAB_1012c|M.abscessus_ATCC_199 QLYIMMFPRTGL
Mb3531c|M.bovis_AF2122/97 AIGVRISAQ---
Rv3501c|M.tuberculosis_H37Rv AIGVRISAQ---
MLBr_02587|M.leprae_Br4923 TIGVRFGTGH--
: : : .