For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLGLMQNRPLVLPHIFHRAERYFGHKQVITATAGGAVAMSTVADVCGQVRRLATVFDELGISSDARVATF CWNTEEHLALYLAAPCTGRVLHTVNIRLFPEQIAYVVNHARDEIIFVERSLLSVLWPLADQLPEVRYFVV IDDGTDHEIPDSARILSYSSLLADSTPFDGAFVVDDENTAAAMCYTSGTTGNPKGVVYSHRSTVLHSLAA LAADVLGLSERDVVMPVVPMFHANSWGLPYAALLTGAGVVLPGPNMSPKALLGLLADHRVTVTAGVPTIW MGAAPLLADYDLSALRYILCGGSAVPKALSEEYRQAIGVSITQVWGMTETSPIAAACTPRTQYAELTTQE KAVALARQGQAVPLVDLRLVDPDTGADVPWDNHSTGEVQAAGPWIASSYYNSDDQQSSFTDDGWLRTGDV GVCDEFGSLLLVDRTKDLVKSGGEWISSVQLENEIMAHPKVSEAAVIAIPHERWVERPLACVVVKQGESM TTEEVIRHLSARVAKWWLPDAVEFIDAVPKTSVGKFSKKTLRARFENYRFPDQGAPV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_0905 | - | - | 100% (547) | AMP-dependent synthetase and ligase |
M. vanbaalenii PYR-1 | Mvan_5172 | - | e-123 | 41.82% (550) | AMP-dependent synthetase and ligase |
M. vanbaalenii PYR-1 | Mvan_3993 | - | 6e-60 | 31.81% (503) | AMP-dependent synthetase and ligase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1087 | fadD14 | 1e-134 | 46.64% (536) | acyl-CoA synthetase |
M. gilvum PYR-GCK | Mflv_4589 | - | 1e-126 | 45.34% (536) | acyl-CoA synthetase |
M. tuberculosis H37Rv | Rv1058 | fadD14 | 1e-134 | 46.64% (536) | acyl-CoA synthetase |
M. leprae Br4923 | MLBr_01051 | xclC | 1e-33 | 30.30% (363) | acyl-CoA synthetase |
M. abscessus ATCC 19977 | MAB_2080 | - | 1e-131 | 46.54% (535) | acyl-CoA synthetase |
M. marinum M | MMAR_4412 | fadD14 | 1e-136 | 48.23% (537) | medium chain fatty-acid-CoA ligase FadD14 |
M. avium 104 | MAV_1186 | - | 1e-139 | 48.14% (538) | acyl-CoA synthetase |
M. smegmatis MC2 155 | MSMEG_5348 | - | 1e-149 | 50.75% (530) | medium-chain fatty acid-CoA ligase |
M. thermoresistible (build 8) | TH_2961 | - | 1e-136 | 46.86% (542) | PUTATIVE AMP-dependent synthetase and ligase |
M. ulcerans Agy99 | MUL_0229 | fadD14 | 1e-137 | 48.60% (537) | acyl-CoA synthetase |
CLUSTAL 2.0.9 multiple sequence alignment Mb1087|M.bovis_AF2122/97 MYGTMQDFPLTITAIMRHGCGVHGRRTVTTATGEG-YRHSSYRDVGQRAG Rv1058|M.tuberculosis_H37Rv MYGTMQDFPLTITAIMRHGCGVHGRRTVTTATGEG-YRHSSYRDVGQRAG MMAR_4412|M.marinum_M MYSTMQDFPLTITAIMRHGCGVHGSRQVITATGDA-YRQTTYREVGQRAA MUL_0229|M.ulcerans_Agy99 MYSTMQDFPLTITAIMRHGCGVHGSRQVITATGDA-YRQTTYREVGQRAA MAV_1186|M.avium_104 MDGTMQDFPLTITAIMRHGCSVHGARTVTTATGDG-YRRTSYRELGDRAA TH_2961|M.thermoresistible__bu MQSTMQPIPLTVAAIMRYAIEVHGDRTVTTATGDGGYRHATYADLGREAA MAB_2080|M.abscessus_ATCC_1997 ----MQNVPLTVSAIVQHAAAIHGDSEVVTPTGNG-YRRTPYRIVLARVA Mflv_4589|M.gilvum_PYR-GCK ----MQDVALTVPAIVAHAAAVHGDREVLTARGPQQISGVSYHELGQRAA Mvan_0905|M.vanbaalenii_PYR-1 MLGLMQNRPLVLPHIFHRAERYFGHKQVITATAGGAVAMSTVADVCGQVR MSMEG_5348|M.smegmatis_MC2_155 MHGLMQDRPLSLPLLMSGLDGRFSHKTVTTNHPDA-PTVATYGAVAQRVR MLBr_01051|M.leprae_Br4923 ---------------------------MLLASLNP--SVVTATDIADAVC : . : . Mb1087|M.bovis_AF2122/97 QLANALRRLGVTGDQRVATFMWNNTEHLVTYFAVPSMGAVLHTLNIRLFP Rv1058|M.tuberculosis_H37Rv QLANALRRLGVTGDQRVATFMWNNTEHLVTYFAVPSMGAVLHTLNIRLFP MMAR_4412|M.marinum_M QLANALRGLGISGDQRVATFMWNNAEHLVAYLAVPSMGAVLHTLNIRLFA MUL_0229|M.ulcerans_Agy99 QLANALRGLGISGDQRVATFMWNNAEHLVTYLAVPSMGAVLHTLNIRLFA MAV_1186|M.avium_104 QLANALRGLGVTGDQRVATFMWNNAEHLAAYLAVPSMGAVLHTLNIRLFP TH_2961|M.thermoresistible__bu RLANALRRLGITGDERVATFQWNNQEHLATYVAVPSMGAVLHTLNIRLFP MAB_2080|M.abscessus_ATCC_1997 RLANALRSLGVTADQRVATFQWSNQEHLEAYCAIPSMGAVLHTLNIRLAP Mflv_4589|M.gilvum_PYR-GCK RLANALREIGVRGDERVATLQWSNQEHLDCYAAVPSMGAVLHTLNLRLPP Mvan_0905|M.vanbaalenii_PYR-1 RLATVFDELGISSDARVATFCWNTEEHLALYLAAPCTGRVLHTVNIRLFP MSMEG_5348|M.smegmatis_MC2_155 RLAGVLDALAVPVGARVGSFGWNTQRHLELYLAVPCTNRVLHTVNHRLFA MLBr_01051|M.leprae_Br4923 VDGVVLSRSGLVG-AATSVAERVGGARLVAVLATPTASTVLAITGCLIAG . .: .: .. :* * * . ** . : Mb1087|M.bovis_AF2122/97 EQIAYVTNEAEDRVILVDLSLARLLAPVLPKLDTVHTVIAVGEGDTTPLR Rv1058|M.tuberculosis_H37Rv EQIAYVTNEAEDRVILVDLSLARLLAPVLPKLDTVHTVIAVGEGDTTPLR MMAR_4412|M.marinum_M EQIAYVANEAEDQVVLVDLSLTNLLAPVLPDLGTVHTVIAVGEGDTAPLE MUL_0229|M.ulcerans_Agy99 EQIAYVANEAEDQVVLVDLSLTNLLAPVLPNLDTVHTVIAVGEGDTAALE MAV_1186|M.avium_104 EQIAYVANEAGDQVVLVDASLVKLLAPVLPGLHTVHTVIVVGDGDTEPLR TH_2961|M.thermoresistible__bu EQLQFIAYEAQDRVVIVDASLVPLLAPVLPTMETVHTVIVVGAGDLSPLQ MAB_2080|M.abscessus_ATCC_1997 EQLAYIANHASDQIVLVDASVAPLLARALPAMASVHTVIVTGEGDLAPLQ Mflv_4589|M.gilvum_PYR-GCK EQLTWIANHAEDQVIIVDGTVLNLLAGALPSMTSVHTVLVTGTGDLAAVQ Mvan_0905|M.vanbaalenii_PYR-1 EQIAYVVNHARDEIIFVERSLLSVLWPLADQLPEVRYFVVIDDGTDHEIP MSMEG_5348|M.smegmatis_MC2_155 DDIVYIVNDAADDVLFVDRSLLDVVWPLVGRFTTVRHVIVMNDGSGPQIP MLBr_01051|M.leprae_Br4923 VPVVPVP----ADIGVVERRHMLTDSGAQAWLGPGPSADSAPDG------ : : : .*: : * Mb1087|M.bovis_AF2122/97 EAGKTVLRFAELIDAESPDFG--WPQIDENSAAAMCYTSGTTGNPKGVVY Rv1058|M.tuberculosis_H37Rv EAGKTVLRFAELIDAESPDFG--WPQIDENSAAAMCYTSGTTGNPKGVVY MMAR_4412|M.marinum_M ESGKTVLRYDELLDGQPTEFD--WPHIDENSAAAMCYTSGTTGHPKGVVY MUL_0229|M.ulcerans_Agy99 ESGKTVLRYDELLDGQSTEFD--WPHIDENSAAAMCYTSGTTGHPKGVVY MAV_1186|M.avium_104 ASGKTVLRYADVIGAEPAEFD--WPRIDENSAAAMCYTSGTTGNPKGVVY TH_2961|M.thermoresistible__bu VPGKQVLRYEEILAAESDEFD--WPELDENSAAAMCYTSGTTGHPKGVVY MAB_2080|M.abscessus_ATCC_1997 GCGKTVLRYEEVLAGQEESFD--WPRLDELSAAAMCYTSGTTGDPKGVVY Mflv_4589|M.gilvum_PYR-GCK GCGKDVLRYDDVVGAQSSTFD--WPDVDEQSAAAMCYTSGTTGRPKGVVY Mvan_0905|M.vanbaalenii_PYR-1 DSAR-ILSYSSLL-ADSTPFDGAFVVDDENTAAAMCYTSGTTGNPKGVVY MSMEG_5348|M.smegmatis_MC2_155 DGAH---DYEHLLAEARPVAR--FEVSDERTAAALCYTSGTTGRPKGVLY MLBr_01051|M.leprae_Br4923 ------LPHIPVQLDARSWNR--YPEPSPDATAMVIYTSGTTGPPKGVLL . : : . ::* : ******* ****: Mb1087|M.bovis_AF2122/97 SHRSSFLHTMAACTTNGIGVGSSDKVLPIVPMFHANGWGLPYAALMAGAD Rv1058|M.tuberculosis_H37Rv SHRSSFLHTMAACTTNGIGVGSSDKVLPIVPMFHANGWGLPYAALMAGAD MMAR_4412|M.marinum_M SHRSSFLHSMATCTANGIGVGSNDRVLPIVPMFHANAWGLPYAALMAGAD MUL_0229|M.ulcerans_Agy99 SHRSSFLHSMATCTANGIGLGSSDRVLPIVPMFHANAWGLPYAALMAGAD MAV_1186|M.avium_104 SHRSSFLHTMAACTANGIGIGATDSLLPIVPMFHANAWGLPYAALMAGAD TH_2961|M.thermoresistible__bu SHRSSYLHSTAVCSGNGLGLGFEDRVLPIVPMFHANAWGLPYAALMAGAD MAB_2080|M.abscessus_ATCC_1997 SHRSTYLHSLTACTANALSVSEADRVLAIVPMFHANAWGLIYAALMSGAD Mflv_4589|M.gilvum_PYR-GCK SHRSTWLHSQAACTSNALGIGHDDTVLAIVPMFHANAWGLPYAAMMAGAQ Mvan_0905|M.vanbaalenii_PYR-1 SHRSTVLHSLAALAADVLGLSERDVVMPVVPMFHANSWGLPYAALLTGAG MSMEG_5348|M.smegmatis_MC2_155 DHRSIVLHAMSLLMADAFGIGEADVVMPIVPMFHVNAWGLPYAAVMSGAS MLBr_01051|M.leprae_Br4923 SRRAIAVD--LDALAQAWQWTADDVLVHGLPLFHVHGLVLGLLGSLRIGN .:*: :. : * :: :*:**.:. * . : . Mb1087|M.bovis_AF2122/97 LVLPDRHLDARSLIHMVETLKPTLAGAVPTIWNDVMHYLEKDPDHDMSSL Rv1058|M.tuberculosis_H37Rv LVLPDRHLDARSLIHMVETLKPTLAGAVPTIWNDVMHYLEKDPDHDMSSL MMAR_4412|M.marinum_M LVLPDRHLDARSLVHMVENLRPTRAGAVPTIWNDVMHYLEKNPGHDVSSL MUL_0229|M.ulcerans_Agy99 LVLPDRHLDARSLVHMVENLRPTRAGAVPTIWNDVMHYLEKNPGHDVSSL MAV_1186|M.avium_104 LVLPDCHLDPRSLVRMVEDLRPTVTGAVPTIWNAVLHHLEDDPDHDMSSL TH_2961|M.thermoresistible__bu LVMPDRYLDAKSLVNLIETQRPTVAGAVPTIWNDVLHHLDSEPDHDISSL MAB_2080|M.abscessus_ATCC_1997 LVLPDRYLQAEPLVSIIEDTRPTVAGAVPTIWNDVDRYLDSHPERDISSL Mflv_4589|M.gilvum_PYR-GCK LLLPDRFLQAGPLVEMIEAARPTMAGAVPTIWTDVLHYLRDNPGHDLSSL Mvan_0905|M.vanbaalenii_PYR-1 VVLPGPNMSPKALLGLLADHRVTVTAGVPTIWMGAAPLLAD---YDLSAL MSMEG_5348|M.smegmatis_MC2_155 LVLPGPAMQPASLAETLDTAGVTFAAAVTTVWRNVLPHLSG---RSLPSV MLBr_01051|M.leprae_Br4923 RFVHTGKPTPTAYAQACSEAGGSLYFGVPTVWSRLVA--DEAVARALRPA .: . . : .*.*:* : . Mb1087|M.bovis_AF2122/97 RLVACGGSAVPESLMRTFEDKHDVQIRQLWGMTETSPLATMAWPP---PG Rv1058|M.tuberculosis_H37Rv RLVACGGSAVPESLMRTFEDKHDVQIRQLWGMTETSPLATMAWPP---PG MMAR_4412|M.marinum_M GLVACGGSAVPESLMRTFEEKYGVQIRQLWGMTETSPLATMAWPP---PG MUL_0229|M.ulcerans_Agy99 GLVACGGSAVPESLMRTFEEKYGVQIRQLWGMTETSPLATMAWPP---PG MAV_1186|M.avium_104 RLVVCGGSAVPVSLMRTFEEKHGVQIRQLWGMTETSPLATMAWPP---PG TH_2961|M.thermoresistible__bu RLVGCGGSAVPVSLMQSFEEKFGVQIRQLWGMTETSPVCTLAWPA---PN MAB_2080|M.abscessus_ATCC_1997 RLVACGGSAVPLSLMRAFEEKYNVPIVQAWGMTETSPLATVARPA---HR Mflv_4589|M.gilvum_PYR-GCK KMVACGGSAVPRSLMTAYDELG-IRIVQAWGMTETSPLAAVALPR---DT Mvan_0905|M.vanbaalenii_PYR-1 RYILCGGSAVPKALSEEYRQAIGVSITQVWGMTETSPIAAACTPRTQYAE MSMEG_5348|M.smegmatis_MC2_155 RRLVSGGGPLPESLSRRYASEIGVPLCSSWGMTETSPLVCSARIP----T MLBr_01051|M.leprae_Br4923 RLLVSGSASLPVPVFDRLAHLTGHRPIERYGSTESLITLSTLADG----- : .*...:* .: . :* **: Mb1087|M.bovis_AF2122/97 TPDDQHWAFRITQGQPVCGVETRIVD-DDGQVLPNDGNAVGEVEVRGPWI Rv1058|M.tuberculosis_H37Rv TPDDQHWAFRITQGQPVCGVETRIVD-DDGQVLPNDGNAVGEVEVRGPWI MMAR_4412|M.marinum_M TPPDRHWAIRSTQGQPVCGVETRIVD-DNGEALPNDGQAVGEVEVRGPWI MUL_0229|M.ulcerans_Agy99 TPPDRHWAIRSTQGQPVCGVETRIVD-DNGEALPNDGQAVGEVEVRGPWI MAV_1186|M.avium_104 TPEDQHWAYRGTQGQPVCGVQMRIVD-DDGRVLPNDGTAVGEVEVRGPWI TH_2961|M.thermoresistible__bu TPADRHWEVRGSQGRPICGVEARIVD-DEGNVLPRDNEAVGELEVRGPWI MAB_2080|M.abscessus_ATCC_1997 ADATRRWEMRASQGRPICGVEIRLRD-DDGKDVPWDGQSVGEIQARGPWI Mflv_4589|M.gilvum_PYR-GCK DTPERSLYLRGTQGRVVAGVQARIVD-DSGAEQPWDGKSVGEIQIRGPWI Mvan_0905|M.vanbaalenii_PYR-1 LTTQEKAVALARQGQAVPLVDLRLVDPDTGADVPWDNHSTGEVQAAGPWI MSMEG_5348|M.smegmatis_MC2_155 GHSGDEVETLCLPGVSIPLVQLRLQR-DDGSFAPHDGKSSGELQVAGPTI MLBr_01051|M.leprae_Br4923 ------ERRAGWVGLPLAGVQTRLVD-ESGGPVPYDGETVGRLQVRSPTM * : *: *: : * * *. : *.:: .* : Mb1087|M.bovis_AF2122/97 AGSYYGGRDE--SKFDS-GWLRTGDVGRIDEQGFITLTDR-AKDVIKSGG Rv1058|M.tuberculosis_H37Rv AGSYYGGRDE--SKFDS-GWLRTGDVGRIDEQGFITLTDR-AKDVIKSGG MMAR_4412|M.marinum_M TGAYYLGYDQ--SKFDS-GWLRTGDVGRIDELGFITLTDR-AKDVIKSGG MUL_0229|M.ulcerans_Agy99 TGAYYLGYDQ--SEFDS-GWLRTGDVGRIDELGFITLTDR-AKDVIKSGG MAV_1186|M.avium_104 AGSYYLGRDD--SKFDS-GWLRTGDVGRIDERGFVTLTDR-AKDVIKSGG TH_2961|M.thermoresistible__bu TGSYYHDADP--SKFEN-GWLRTGDVGRMDAQSYITLTDR-AKDVIKSGG MAB_2080|M.abscessus_ATCC_1997 TGSYFGDNDT--EKFDE-GWLRTGDVGKIDAEGYLTLTDR-SKDVIKSGG Mflv_4589|M.gilvum_PYR-GCK TQSYYEYDSP--AVSPD-GWLCTGDVGTISADAFITLTDR-AKDVIKSGG Mvan_0905|M.vanbaalenii_PYR-1 ASSYYNSDDQQSSFTDD-GWLRTGDVGVCDEFGSLLLVDR-TKDLVKSGG MSMEG_5348|M.smegmatis_MC2_155 ASGYYGATDGSAAFTED-GWLRTGDVATIDAHGLVRIVDR-IKDLIKSGG MLBr_01051|M.leprae_Br4923 FGGYLNRPEATAEAFDEDGWYRTGDVAVVDSGGMHRIVGRESVDLIKLGG .* . . ** ****. . . :..* *::* ** Mb1087|M.bovis_AF2122/97 EWISSVELENCLIAHPDVLEAAVVGVPDERWQERPLAVVVVREGATVSAG Rv1058|M.tuberculosis_H37Rv EWISSVELENCLIAHPDVLEAAVVGVPDERWQERPLAVVVVREGATVSAG MMAR_4412|M.marinum_M EWISSVELENCLIAHPDVVEAAVVGVPDERWQERPLAVVVRREGATVSAA MUL_0229|M.ulcerans_Agy99 EWISSVELENCLIAHPDVVEAAVVGVPDERWQERPLAVVVRREGATVSAA MAV_1186|M.avium_104 EWISSVELENCLIGHPDVVEAAVVGVPDERWEERPLAVVVVKDGASVDAD TH_2961|M.thermoresistible__bu EWISSVELENHLIGHPKVREAAVVGVPDDRWQERPLAAVVLHEGQQATPE MAB_2080|M.abscessus_ATCC_1997 EWISSVELENTLIGHPAVYEAAVVGVADDKWQERPLALVVVHPGTDVDID Mflv_4589|M.gilvum_PYR-GCK EWISSVELENELAAHPAVRTATVIGVPDDKWQERPLAVVVLAADCTATAA Mvan_0905|M.vanbaalenii_PYR-1 EWISSVQLENEIMAHPKVSEAAVIAIPHERWVERPLACVVVKQGESMTTE MSMEG_5348|M.smegmatis_MC2_155 EWISSVELENAIMTCPAVAEAAVVGAPHERWGERPLAFVVPAAGHDATPD MLBr_01051|M.leprae_Br4923 YRIGAGEIEMALLGHPDVREVAVVGLPDEDLGQRIVAFVVG--AEALDAD *.: ::* : * * .:*:. ..: :* :* ** Mb1087|M.bovis_AF2122/97 DLRAFLADKVVRWWLPERWAFVDEIPRTSVGKYDKKAIRSRYAEGAYQIT Rv1058|M.tuberculosis_H37Rv DLRAFLADKVVRWWLPERWAFVDEIPRTSVGKYDKKAIRSRYAEGAYQIT MMAR_4412|M.marinum_M ELRKFLADRVVRWWLPERWAFADQVPRTSVGKYDKKTIRAGYAEGVYQVT MUL_0229|M.ulcerans_Agy99 ELRKFLADRVVRWWLPERWAFADQVPRTSVGKYDKKTIRAGYAESVYQVT MAV_1186|M.avium_104 QLRKFLADKVVRWWLPERWTFVDEIPRTSVGKYDKKAVRSRYADGGYRVI TH_2961|M.thermoresistible__bu ELREFLSDKVVRWWLPERWTFVEEIPRTSVGKYDKKTIRARYADGAYQVT MAB_2080|M.abscessus_ATCC_1997 QLRSFLADKVAKWWIPERWSFVSDIPRTSVGKYDKKAIRARHSAGEYLIE Mflv_4589|M.gilvum_PYR-GCK ELTEFLRARVAKWWLPERWAFVADVPLTSTGKFDKKKLRSQHADGDLAVE Mvan_0905|M.vanbaalenii_PYR-1 EVIRHLSARVAKWWLPDAVEFIDAVPKTSVGKFSKKTLRARFENYRFPDQ MSMEG_5348|M.smegmatis_MC2_155 LVRDHLQQRVARWWIPDDIVIVDELPKTATGKISKRALRQNLCAPAG--- MLBr_01051|M.leprae_Br4923 ELINYVAQQLSIHKRPREVRFVDALPRNAMGKVLKKQLLFEG-------- : .: :: * : :* .: ** *: : Mb1087|M.bovis_AF2122/97 EVHT Rv1058|M.tuberculosis_H37Rv EVHT MMAR_4412|M.marinum_M EVHN MUL_0229|M.ulcerans_Agy99 DVHN MAV_1186|M.avium_104 EARD TH_2961|M.thermoresistible__bu HLGG MAB_2080|M.abscessus_ATCC_1997 IETS Mflv_4589|M.gilvum_PYR-GCK TLA- Mvan_0905|M.vanbaalenii_PYR-1 GAPV MSMEG_5348|M.smegmatis_MC2_155 ---- MLBr_01051|M.leprae_Br4923 ----