For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NAVLGLSVTPSGVGVVLVEGHDDDRVTLDGERFEVRRRGSATAAETSAQAAAAVLRTEAVAADLGRRVHS IGVTWSDDAGTEASLLLTSLRESGYDNIVPVRLSEATDALARRIALVLGYRTTAVCVIEPEQLIALVVSV EDAADGTSEAVQTAVNHSVVTEDDLVGWLSTVFTRADWEPEALVLVGSGEDLEDLLPVLEDALAVPVFSP AEAALALARGAALACAQPGEFAAWEHTTRQPVTPHATRRRRRRWPQALLAAGAITFVASASAAVALQLTP EPIASPPRSAAESPVRQPAAPSPVPPAPVAPAPDPAPEPVAPAAEDVPVEAPPAPQELPEQVSPDVLPPA TAPVEAVPPPPPVEPAPAVIPAPVPAERPGILDRIRDRLSRVGDPVVEMPPPPVPGAPVAPVPPPLP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_3300 | - | - | 100% (418) | hypothetical protein Mflv_3300 |
M. gilvum PYR-GCK | Mflv_5241 | - | 4e-42 | 34.99% (423) | hypothetical protein Mflv_5241 |
M. gilvum PYR-GCK | Mflv_0290 | - | 6e-42 | 32.46% (496) | hypothetical protein Mflv_0290 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1919 | - | 8e-57 | 37.93% (377) | hypothetical protein Mb1919 |
M. tuberculosis H37Rv | Rv1887 | - | 9e-57 | 37.93% (377) | hypothetical protein Rv1887 |
M. leprae Br4923 | MLBr_00048 | - | 4e-08 | 31.51% (146) | hypothetical protein MLBr_00048 |
M. abscessus ATCC 19977 | MAB_4296c | - | 1e-40 | 32.84% (472) | hypothetical protein MAB_4296c |
M. marinum M | MMAR_2779 | - | 2e-58 | 38.50% (374) | hypothetical protein MMAR_2779 |
M. avium 104 | MAV_2814 | - | 5e-56 | 37.70% (382) | hypothetical protein MAV_2814 |
M. smegmatis MC2 155 | MSMEG_3531 | - | 7e-74 | 42.63% (441) | hypothetical protein MSMEG_3531 |
M. thermoresistible (build 8) | TH_3900 | - | 4e-32 | 31.69% (385) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2968 | - | 5e-59 | 38.77% (374) | hypothetical protein MUL_2968 |
M. vanbaalenii PYR-1 | Mvan_3021 | - | 1e-131 | 62.87% (439) | FHA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3300|M.gilvum_PYR-GCK --------MNAVLGLSVTPSGVGVVLVEGH-------------DDDRVTL Mvan_3021|M.vanbaalenii_PYR-1 --------MDAVLGLSVTPSAVGLVLVEGQ-------------DVDGVTL MSMEG_3531|M.smegmatis_MC2_155 --------MDAVIGVSVTPSTVGMVLVEGDSAA----------DFEAVNL Mb1919|M.bovis_AF2122/97 --------MDTVLGLSITPTTLGWVLAEGHG-------------ADGAIL Rv1887|M.tuberculosis_H37Rv --------MDTVLGLSITPTTLGWVLAEGHG-------------ADGAIL MMAR_2779|M.marinum_M --------MDTVLGLSVTPTTVGWVLAEGHG-------------ADGAIL MUL_2968|M.ulcerans_Agy99 ---MRCEVLDTVLGLSVTPTTVGWVLAEGHG-------------ADGAIL MAV_2814|M.avium_104 ----------------MTPTTVGWVLAEGHG-------------ADGTIL MAB_4296c|M.abscessus_ATCC_199 --------MDVVLGVSMTPTTARLVLVEGAG-------------ADGRIV TH_3900|M.thermoresistible__bu --------VDIVLGVSMTPTTVRMVLVEGEK-------------ADGVTV MLBr_00048|M.leprae_Br4923 MAADYDKLFRLDDGAYASPDQAAEQLFDDAPLYPPPIIPTCTTTPNGEVA :* * :. : Mflv_3300|M.gilvum_PYR-GCK D-----GERFEVRRRGSATAAETSAQAAAAVLRTEAVAADLGRRVHSIG- Mvan_3021|M.vanbaalenii_PYR-1 D-----GDGFEVGGDGAAGALCTSEQATAAVRRSEAVAADLGRRVHAIG- MSMEG_3531|M.smegmatis_MC2_155 D-----LELFDVAGLDLSRARAARKEIVATVARAENVAADNGRRLRSIG- Mb1919|M.bovis_AF2122/97 D-----RNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIG- Rv1887|M.tuberculosis_H37Rv D-----RNELELHSGRNAQAIHTAEQLAAEVLLAHEVAAAGDHRLRVIG- MMAR_2779|M.marinum_M D-----HHESQLHGSRGMRIVHTAEQVADEVWHAKEVASGAGHRLRMIG- MUL_2968|M.ulcerans_Agy99 D-----HHESQLHGSRGMRIVHTAEQVADEVWHAKEVASGAGHRLRMIG- MAV_2814|M.avium_104 D-----HQELALHSGGAVRAASAAEQVVDEVLRVEAAAAGSDQRLRVIG- MAB_4296c|M.abscessus_ATCC_199 D-----TDTIVVSEGEGTTS----EQVLSAIVGTRDGMLDGGHNLVSTG- TH_3900|M.thermoresistible__bu D-----HDVFDISAVDGSATPSAAEQVVAAVLGTQESAAAGGHRLISIG- MLBr_00048|M.leprae_Br4923 SPMPDWSEQLPPNPPAASKSPLPPMPIGSSVQPPPASSESPRAPMPVSAP . . : : . Mflv_3300|M.gilvum_PYR-GCK --------VTWSDDAGTEASLLLTSLRESGYDNIVPVRLSEATDALARRI Mvan_3021|M.vanbaalenii_PYR-1 --------VTWSDDADTEASLLLKSLSEAGFDNIVPVRLSEATDALARRI MSMEG_3531|M.smegmatis_MC2_155 --------VTWSDGADMQAAELVGDLNEAGFDNVVDVRFRQATDALANSI Mb1919|M.bovis_AF2122/97 --------VTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAI Rv1887|M.tuberculosis_H37Rv --------VTWNAEASAQAALLVESLTGAGFDNVVPVRRLRAIETLAQAI MMAR_2779|M.marinum_M --------VTWGDEASAQAALLLEALTDAGFDNVVPVRLLDAVETLAEAI MUL_2968|M.ulcerans_Agy99 --------VTWSDEASAQAALLLEALTDAGFDNVVPVRLVDAVETLAEAI MAV_2814|M.avium_104 --------VTWNDEASVPAALVLEALTDAGLHNVVPVRFLQAVETLAQAI MAB_4296c|M.abscessus_ATCC_199 --------VVWSDHA--EAAELRDSLASRGIDGVEFFSALHAGGALAKAA TH_3900|M.thermoresistible__bu --------VAWSDHA--EAAALREALAARGLDDVMLVSELHAAGALAQAV MLBr_00048|M.leprae_Br4923 PRSPAASLMPISEPPQWPPAEAPEHQFAKAEPPSVPIPINEPSPAKPATP : . . .: . . . : . Mflv_3300|M.gilvum_PYR-GCK ALVLGYRTTAVCVIEPEQLIALVVSVEDAADGTSEAVQTAVNHSVVTEDD Mvan_3021|M.vanbaalenii_PYR-1 AKLMGYRTTAVCVIEPEQLIALVATDEG-------AVQTAVNHSVVTEED MSMEG_3531|M.smegmatis_MC2_155 ADMAGFATTVVCVFEPEGALALTVDRRDG------VVDTARSRAIGSVRG Mb1919|M.bovis_AF2122/97 APVIGYEQIAVCVLEHESATVVMVDTHDG------KTQIAVKHVCRGLSG Rv1887|M.tuberculosis_H37Rv APVIGYEQIAVCVLEHESATVVMVDTHDG------KTQIAVKHVCRGLSG MMAR_2779|M.marinum_M APVIGYDQTAVCILEHDWATVVMVDTQDG------KTQTAVKHVRGGFDG MUL_2968|M.ulcerans_Agy99 APVIGYDQTAVCILEHDWATVVMVDTQDG------KTQTAVKHVRGGFDG MAV_2814|M.avium_104 APVIGYEQTAVCVLEHDWTTVVMVDSHDG------QTQTATKQVRGGFDG MAB_4296c|M.abscessus_ATCC_199 SSVTGYDKSALLVIEPQTATLAVVDSADG----SIVGLASEPLITGVTSG TH_3900|M.thermoresistible__bu GRRVGYDTTALFFIERDTATMAVVQTDDG----SVVKVLSRDLHNADAMA MLBr_00048|M.leprae_Br4923 MPMTPIDGSQRTPVTSPEPSLAEFEAQPPATPKPSLLPRPMSSPPEAPRP . . Mflv_3300|M.gilvum_PYR-GCK LVGWLSTVFTRADWEPEALVLVGSGEDLED----LLPVLEDALAVPVFSP Mvan_3021|M.vanbaalenii_PYR-1 LIGWLSSVFARADWAPEALVLVGSAEDLDG----LSPILEDALAVPVFSP MSMEG_3531|M.smegmatis_MC2_155 LVGWLERLLAASGRVPDALVVVGSAVDLDADVDRLMPKLQAALGIPVFTP Mb1919|M.bovis_AF2122/97 LTSWLTGMFGRDAWRPAGVVVVGSDSEVSE----FSWQLERVLPVPVFAQ Rv1887|M.tuberculosis_H37Rv LTSWLTGMFGRDAWRPAGVVVVGSDSEVSE----FSWQLERVLPVPVFAQ MMAR_2779|M.marinum_M LNSWLTGMFDRGAWRPAAVVVVGSDTDVEE----FSWQLEKALPVPVFAQ MUL_2968|M.ulcerans_Agy99 LNSWLTGMFDRGAWRPAAVVVVGSDTDVEE----FSWQLEKALPVPVFAQ MAV_2814|M.avium_104 LTRWLTGMFERDGWQPGGIVVVGAHSDIDG----LSWQLEKALPVPVFVQ MAB_4296c|M.abscessus_ATCC_199 VLANLVNPLKGKENAPDGVFLLGLGTDVSD----LAESLGDAIALPVNSP TH_3900|M.thermoresistible__bu TLTEMALTVDGQDSPPQGMFLIGSGVDISE----LKAHLDKLLRLPVHAP MLBr_00048|M.leprae_Br4923 SANQHSRHARRGHHHRDETQQANPASATEPMIAPRARTAELRQAPHAAAE . . . Mflv_3300|M.gilvum_PYR-GCK AEAALALARGAALACAQPGEFAAWEHTTR----QPVTP------------ Mvan_3021|M.vanbaalenii_PYR-1 DAAQLALARGAALACASNGDFDVWPGPAS----ERQTR------------ MSMEG_3531|M.smegmatis_MC2_155 ADGDLALARGAALVSARRGRF-MFPDKAD----QQRSR------------ Mb1919|M.bovis_AF2122/97 TMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAP------------ Rv1887|M.tuberculosis_H37Rv TMAQVTVARGAALAAAQSTEFTDAQLVADSVSQPTVAP------------ MMAR_2779|M.marinum_M TMAQVTIARGAALAAAQSTDFTDARLIAD-VSEPAPAP------------ MUL_2968|M.ulcerans_Agy99 TMAQVTIARGAALAAAQSTDFTDARLIAD-VSEPAPAP------------ MAV_2814|M.avium_104 SMAQVTIARGAALSAARSTEFTDEQLVARRSEPVTPAP------------ MAB_4296c|M.abscessus_ATCC_199 DQPELALARGAALASAQEPDFEASTALLGQAYSLEG-------------- TH_3900|M.thermoresistible__bu EESDLALCRGAALAAANAPTFEPSTVGLAYSQVPDGGPTVPASVYAAGFG MLBr_00048|M.leprae_Br4923 PAPTQHLTRPDGLVSHRTALHDSTATSAIGVQTGRSTG------------ : * .* . . Mflv_3300|M.gilvum_PYR-GCK --------------------------------------------HATRRR Mvan_3021|M.vanbaalenii_PYR-1 --------------------------------------------PATTRF MSMEG_3531|M.smegmatis_MC2_155 --------------------------------------------WTSR-- Mb1919|M.bovis_AF2122/97 --------------------------------------------RRSR-- Rv1887|M.tuberculosis_H37Rv --------------------------------------------RRSR-- MMAR_2779|M.marinum_M --------------------------------------------KRSL-- MUL_2968|M.ulcerans_Agy99 --------------------------------------------KRSL-- MAV_2814|M.avium_104 --------------------------------------------VRHRRL MAB_4296c|M.abscessus_ATCC_199 -PTGTGFAHPDAVTESAGEANTELREFEDFDDQPAE--------RKPFLL TH_3900|M.thermoresistible__bu ADAATAGGHPYAAYAAFAGAQTQLASIGGAAPSPVPGEPPVDEDRKPFLL MLBr_00048|M.leprae_Br4923 -----AKKPSKVVAKRGWRHWVHTVTRINLGLSPDERYELDLRTRVRRPP Mflv_3300|M.gilvum_PYR-GCK RRRWPQALLAAGAITFVASASAAVALQLTPEPIASP------------PR Mvan_3021|M.vanbaalenii_PYR-1 ARSAPAVLLAAGVVTFVASVSVAVALALTPGQPAPQ------------PR MSMEG_3531|M.smegmatis_MC2_155 -QLAPAAMLLVGVVTFVVSLSLAISQQMSPREQAFERPTRPVVNTSGTPA Mb1919|M.bovis_AF2122/97 HYAGAAAALAAAAVTFVASLSLAVGIQLAPHN------------------ Rv1887|M.tuberculosis_H37Rv HYAGAAAALAAAAVTFVASLSLAVGIQLAPHN------------------ MMAR_2779|M.marinum_M HYAGAATTLAAAAVTFVGSLSLAIGLQLTPER------------------ MUL_2968|M.ulcerans_Agy99 HYAGAATTLAAAAVTFVGSLSLAIGLQLTPER------------------ MAV_2814|M.avium_104 SYAGAMTALTAGAISFVGSVSLAVGIHVGPAS------------------ MAB_4296c|M.abscessus_ATCC_199 VGAPLLLVFGICSIALAVSLTVTVRSTVDQGPSSPDRGVVQNPLPAEAPK TH_3900|M.thermoresistible__bu VGSALTSIFVVGVVALVVSLAVSIRPTVDQRPSPADS--------ALAPG MLBr_00048|M.leprae_Br4923 RGSYQIGILGLKGGAGKTTVTVTLGSMFARVRNDRILVVDADTSCGNLAD : : : : :: . Mflv_3300|M.gilvum_PYR-GCK SAAESP---------VRQPAAPSP---VPP---APVAPAPDPAPEP---- Mvan_3021|M.vanbaalenii_PYR-1 PAAESA---------AAPPAAAPPRSQVPPPPVAAVEPAPVAAVEPAPVA MSMEG_3531|M.smegmatis_MC2_155 AVRQLP---------PALPAAPPPPPQAPP--AAEVAEAVPPAVDPPLAD Mb1919|M.bovis_AF2122/97 -----------------DTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPP Rv1887|M.tuberculosis_H37Rv -----------------DTGTAKHGAHKPTPRIAKAVAPAVPPPPTVTPP MMAR_2779|M.marinum_M -----------------HHTATGHAGHKPTPEIVEAVAPVVPMPAQPEPS MUL_2968|M.ulcerans_Agy99 -----------------HHTATGHAGHKPTPEIVEAVAPVVPMPAQPEPS MAV_2814|M.avium_104 -----------------ATAAAKHATHPPAPQVAEAVKAVTPLPAAP-QT MAB_4296c|M.abscessus_ATCC_199 QAAPPPSPVEAPAPAVSPAPVQQVVAPAPQHNPAPAPKQVAPAPVQAAPQ TH_3900|M.thermoresistible__bu VAAP-----------VQPETVPEALXXXPPH-PSPAPN-VKPLRCAGGFS MLBr_00048|M.leprae_Br4923 RAGRFSEAN--IADLLADKDVKSYNDIRTHTSVNAVNLEVLPAAEYSTAQ . . . . Mflv_3300|M.gilvum_PYR-GCK -VAPAAEDVPVEAPP-------APQELP-----EQVSPDVL--------- Mvan_3021|M.vanbaalenii_PYR-1 AVEPAPEPVAALVAP-------EPEAPPPVVDEAQSVPAPL--------- MSMEG_3531|M.smegmatis_MC2_155 VAESPVEQALPQLPPQLPLPDAATALPPPVVIPAPPTKKPLLSRIRDRLR Mb1919|M.bovis_AF2122/97 VPARAPRPAAQHEPP----------------------------------- Rv1887|M.tuberculosis_H37Rv VPARAPRPAAQHEPP----------------------------------- MMAR_2779|M.marinum_M APHQAPAPGAGQEP------------------------------------ MUL_2968|M.ulcerans_Agy99 APHQAPAPGAGQEP------------------------------------ MAV_2814|M.avium_104 KPQTKPPSGPAPAP------------------------------------ MAB_4296c|M.abscessus_ATCC_199 APAPAPEAPAPAAPAPVPEEQPAPVAPPPAVVPVPIPLFPPVWEPPRRQE TH_3900|M.thermoresistible__bu AVVARTTAPGP---------------------------FPTGWS------ MLBr_00048|M.leprae_Br4923 HALSGEDWNFAAATVSKYYNVMLADCGVGLFDPVTRG------------- Mflv_3300|M.gilvum_PYR-GCK -----PPATAPVEAVPP------PPPVEP-APAVIPAPVPAERPGILDRI Mvan_3021|M.vanbaalenii_PYR-1 -----PEQAPVVEAASPDAGLPTAPPVIP-APEVVP-PVPQERPGILQRI MSMEG_3531|M.smegmatis_MC2_155 GEPDVPEQMVIGEPPPPAEITPIPPPGAPPAPPVDDAPAPEAPP---EPP Mb1919|M.bovis_AF2122/97 --------ARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP-ITRVLEHI Rv1887|M.tuberculosis_H37Rv --------ARVTSGEALTEPNPPEEQPNASAPQQDRNDSQP-ITRVLEHI MMAR_2779|M.marinum_M --------IRLTAGEQITDAAPVE-QPGGEAPQSEPADGSPMLTRVLTHI MUL_2968|M.ulcerans_Agy99 --------IRLTAGEQITDAAPVE-QPGGEAPQSEPADGSPMLTRVLTHI MAV_2814|M.avium_104 ------------AGEP---AAPDEQPGIGDDRQMESGNRQPYLTRVLEHI MAB_4296c|M.abscessus_ATCC_199 -----NPWWPDRDRPRYTPPAQTQQPPIISIPGLPPIGGGDSDRGSHGGS TH_3900|M.thermoresistible__bu ---------------RRSAAAELVSHATVRCS---------------GDG MLBr_00048|M.leprae_Br4923 ---------VLSTASGVVIVTSTSVDAARQAAIALDWLRHNGYQDLLSRA Mflv_3300|M.gilvum_PYR-GCK RDRLSRVG--DP-VVEMPPP------PVPGAPV-APVPPPLP-------- Mvan_3021|M.vanbaalenii_PYR-1 RDRLSNVGPDDPQQAAVPPP------PAP--------APPLP-------- MSMEG_3531|M.smegmatis_MC2_155 PAPEAPPAADPPPPADVPPPDPPPAEPAPVEPEPAPEAPPAP-------- Mb1919|M.bovis_AF2122/97 PGAYG----DSAPPAE---------------------------------- Rv1887|M.tuberculosis_H37Rv PGAYG----DSAPPAE---------------------------------- MMAR_2779|M.marinum_M PGSYGE--EEGSRPPE---------------------------------- MUL_2968|M.ulcerans_Agy99 PGSYGE--EEGSRPPE---------------------------------- MAV_2814|M.avium_104 PGDTGEPAADSAPHPTLDPQP----------------------------- MAB_4296c|M.abscessus_ATCC_199 RGGSGRGGWGDDGDSRGGSDSGSRGGWGDNGGSRGGWGDSGSSRGGSDSG TH_3900|M.thermoresistible__bu PGSAGVPGWDPDPSIK-----------ADGGRHRFRFAVQMTTRCGLIAH MLBr_00048|M.leprae_Br4923 CVVINHVMPKEPNIASKDLVQQFEQQIQPGRVVVLPWDKHIAAGTEIRLD Mflv_3300|M.gilvum_PYR-GCK ------------------------------- Mvan_3021|M.vanbaalenii_PYR-1 ------------------------------- MSMEG_3531|M.smegmatis_MC2_155 ------------------------------- Mb1919|M.bovis_AF2122/97 ------------------------------- Rv1887|M.tuberculosis_H37Rv ------------------------------- MMAR_2779|M.marinum_M ------------------------------- MUL_2968|M.ulcerans_Agy99 ------------------------------- MAV_2814|M.avium_104 ------------------------------- MAB_4296c|M.abscessus_ATCC_199 SRGGWGGNSGSHGGGSGGGSNSGFPWPFGGR TH_3900|M.thermoresistible__bu P------------------------------ MLBr_00048|M.leprae_Br4923 RLDPLYRRRILELAAALSDDFERAGRH----