For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RCEVLDTVLGLSVTPTTVGWVLAEGHGADGAILDHHESQLHGSRGMRIVHTAEQVADEVWHAKEVASGAG HRLRMIGVTWSDEASAQAALLLEALTDAGFDNVVPVRLVDAVETLAEAIAPVIGYDQTAVCILEHDWATV VMVDTQDGKTQTAVKHVRGGFDGLNSWLTGMFDRGAWRPAAVVVVGSDTDVEEFSWQLEKALPVPVFAQT MAQVTIARGAALAAAQSTDFTDARLIADVSEPAPAPKRSLHYAGAATTLAAAAVTFVGSLSLAIGLQLTP ERHHTATGHAGHKPTPEIVEAVAPVVPMPAQPEPSAPHQAPAPGAGQEPIRLTAGEQITDAAPVEQPGGE APQSEPADGSPMLTRVLTHIPGSYGEEEGSRPPE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2968 | - | - | 100% (385) | hypothetical protein MUL_2968 |
M. ulcerans Agy99 | MUL_1227 | - | 5e-16 | 26.96% (382) | hypothetical protein MUL_1227 |
M. ulcerans Agy99 | MUL_0637 | - | 5e-06 | 25.88% (228) | hypothetical protein MUL_0637 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1919 | - | 1e-140 | 67.28% (382) | hypothetical protein Mb1919 |
M. gilvum PYR-GCK | Mflv_3300 | - | 6e-59 | 38.77% (374) | hypothetical protein Mflv_3300 |
M. tuberculosis H37Rv | Rv1887 | - | 1e-140 | 67.28% (382) | hypothetical protein Rv1887 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4296c | - | 6e-32 | 30.47% (384) | hypothetical protein MAB_4296c |
M. marinum M | MMAR_2779 | - | 0.0 | 99.47% (380) | hypothetical protein MMAR_2779 |
M. avium 104 | MAV_2814 | - | 1e-122 | 59.52% (378) | hypothetical protein MAV_2814 |
M. smegmatis MC2 155 | MSMEG_3531 | - | 4e-46 | 34.31% (408) | hypothetical protein MSMEG_3531 |
M. thermoresistible (build 8) | TH_3900 | - | 9e-37 | 31.28% (438) | PUTATIVE conserved hypothetical protein |
M. vanbaalenii PYR-1 | Mvan_3021 | - | 1e-61 | 41.76% (352) | FHA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3300|M.gilvum_PYR-GCK -----MNAVLGLSVTPSGVGVVLVEGH---DDDRVTLDGERFEVRRRGSA Mvan_3021|M.vanbaalenii_PYR-1 -----MDAVLGLSVTPSAVGLVLVEGQ---DVDGVTLDGDGFEVGGDGAA MSMEG_3531|M.smegmatis_MC2_155 -----MDAVIGVSVTPSTVGMVLVEGDSAADFEAVNLDLELFDVAGLDLS MUL_2968|M.ulcerans_Agy99 MRCEVLDTVLGLSVTPTTVGWVLAEGHG---ADGAILDHHESQLHGSRGM MMAR_2779|M.marinum_M -----MDTVLGLSVTPTTVGWVLAEGHG---ADGAILDHHESQLHGSRGM Mb1919|M.bovis_AF2122/97 -----MDTVLGLSITPTTLGWVLAEGHG---ADGAILDRNELELHSGRNA Rv1887|M.tuberculosis_H37Rv -----MDTVLGLSITPTTLGWVLAEGHG---ADGAILDRNELELHSGRNA MAV_2814|M.avium_104 -------------MTPTTVGWVLAEGHG---ADGTILDHQELALHSGGAV MAB_4296c|M.abscessus_ATCC_199 -----MDVVLGVSMTPTTARLVLVEGAG---ADGRIVDTDTIVVSEGEGT TH_3900|M.thermoresistible__bu -----VDIVLGVSMTPTTVRMVLVEGEK---ADGVTVDHDVFDISAVDGS :**: **.** : :* . : Mflv_3300|M.gilvum_PYR-GCK TAAETSAQAAAAVLRTEAVAADLGRRVHSIGVTWSDDAGTEASLLLTSLR Mvan_3021|M.vanbaalenii_PYR-1 GALCTSEQATAAVRRSEAVAADLGRRVHAIGVTWSDDADTEASLLLKSLS MSMEG_3531|M.smegmatis_MC2_155 RARAARKEIVATVARAENVAADNGRRLRSIGVTWSDGADMQAAELVGDLN MUL_2968|M.ulcerans_Agy99 RIVHTAEQVADEVWHAKEVASGAGHRLRMIGVTWSDEASAQAALLLEALT MMAR_2779|M.marinum_M RIVHTAEQVADEVWHAKEVASGAGHRLRMIGVTWGDEASAQAALLLEALT Mb1919|M.bovis_AF2122/97 QAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESLT Rv1887|M.tuberculosis_H37Rv QAIHTAEQLAAEVLLAHEVAAAGDHRLRVIGVTWNAEASAQAALLVESLT MAV_2814|M.avium_104 RAASAAEQVVDEVLRVEAAAAGSDQRLRVIGVTWNDEASVPAALVLEALT MAB_4296c|M.abscessus_ATCC_199 TS----EQVLSAIVGTRDGMLDGGHNLVSTGVVWSDHA--EAAELRDSLA TH_3900|M.thermoresistible__bu ATPSAAEQVVAAVLGTQESAAAGGHRLISIGVAWSDHA--EAAALREALA : : . .:.: **.*. * *: : * Mflv_3300|M.gilvum_PYR-GCK ESGYDNIVPVRLSEATDALARRIALVLGYRTTAVCVIEPEQLIALVVSVE Mvan_3021|M.vanbaalenii_PYR-1 EAGFDNIVPVRLSEATDALARRIAKLMGYRTTAVCVIEPEQLIALVATDE MSMEG_3531|M.smegmatis_MC2_155 EAGFDNVVDVRFRQATDALANSIADMAGFATTVVCVFEPEGALALTVDRR MUL_2968|M.ulcerans_Agy99 DAGFDNVVPVRLVDAVETLAEAIAPVIGYDQTAVCILEHDWATVVMVDTQ MMAR_2779|M.marinum_M DAGFDNVVPVRLLDAVETLAEAIAPVIGYDQTAVCILEHDWATVVMVDTQ Mb1919|M.bovis_AF2122/97 GAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTH Rv1887|M.tuberculosis_H37Rv GAGFDNVVPVRRLRAIETLAQAIAPVIGYEQIAVCVLEHESATVVMVDTH MAV_2814|M.avium_104 DAGLHNVVPVRFLQAVETLAQAIAPVIGYEQTAVCVLEHDWTTVVMVDSH MAB_4296c|M.abscessus_ATCC_199 SRGIDGVEFFSALHAGGALAKAASSVTGYDKSALLVIEPQTATLAVVDSA TH_3900|M.thermoresistible__bu ARGLDDVMLVSELHAAGALAQAVGRRVGYDTTALFFIERDTATMAVVQTD * ..: . * :**. . *: .: .:* : . Mflv_3300|M.gilvum_PYR-GCK DAADGTSEAVQTAVNHSVVTEDDLVGWLSTVFTRADWEPEALVLVGSGED Mvan_3021|M.vanbaalenii_PYR-1 G-------AVQTAVNHSVVTEEDLIGWLSSVFARADWAPEALVLVGSAED MSMEG_3531|M.smegmatis_MC2_155 DG------VVDTARSRAIGSVRGLVGWLERLLAASGRVPDALVVVGSAVD MUL_2968|M.ulcerans_Agy99 DG------KTQTAVKHVRGGFDGLNSWLTGMFDRGAWRPAAVVVVGSDTD MMAR_2779|M.marinum_M DG------KTQTAVKHVRGGFDGLNSWLTGMFDRGAWRPAAVVVVGSDTD Mb1919|M.bovis_AF2122/97 DG------KTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSE Rv1887|M.tuberculosis_H37Rv DG------KTQIAVKHVCRGLSGLTSWLTGMFGRDAWRPAGVVVVGSDSE MAV_2814|M.avium_104 DG------QTQTATKQVRGGFDGLTRWLTGMFERDGWQPGGIVVVGAHSD MAB_4296c|M.abscessus_ATCC_199 DG----SIVGLASEPLITGVTSGVLANLVNPLKGKENAPDGVFLLGLGTD TH_3900|M.thermoresistible__bu DG----SVVKVLSRDLHNADAMATLTEMALTVDGQDSPPQGMFLIGSGVD . : : . * .:.::* : Mflv_3300|M.gilvum_PYR-GCK LED----LLPVLEDALAVPVFSPAEAALALARGAALACAQPGEFAAWEHT Mvan_3021|M.vanbaalenii_PYR-1 LDG----LSPILEDALAVPVFSPDAAQLALARGAALACASNGDFDVWPGP MSMEG_3531|M.smegmatis_MC2_155 LDADVDRLMPKLQAALGIPVFTPADGDLALARGAALVSARRGRF-MFPDK MUL_2968|M.ulcerans_Agy99 VEE----FSWQLEKALPVPVFAQTMAQVTIARGAALAAAQSTDFTDARLI MMAR_2779|M.marinum_M VEE----FSWQLEKALPVPVFAQTMAQVTIARGAALAAAQSTDFTDARLI Mb1919|M.bovis_AF2122/97 VSE----FSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLV Rv1887|M.tuberculosis_H37Rv VSE----FSWQLERVLPVPVFAQTMAQVTVARGAALAAAQSTEFTDAQLV MAV_2814|M.avium_104 IDG----LSWQLEKALPVPVFVQSMAQVTIARGAALSAARSTEFTDEQLV MAB_4296c|M.abscessus_ATCC_199 VSD----LAESLGDAIALPVNSPDQPELALARGAALASAQEPDFEASTAL TH_3900|M.thermoresistible__bu ISE----LKAHLDKLLRLPVHAPEESDLALCRGAALAAANAPTFEPSTVG :. : * : :** :::.***** .* * Mflv_3300|M.gilvum_PYR-GCK TR--QPVTP----------------------------------------- Mvan_3021|M.vanbaalenii_PYR-1 AS--ERQTR----------------------------------------- MSMEG_3531|M.smegmatis_MC2_155 AD--QQRSR----------------------------------------- MUL_2968|M.ulcerans_Agy99 AD-VSEPAP----------------------------------------- MMAR_2779|M.marinum_M AD-VSEPAP----------------------------------------- Mb1919|M.bovis_AF2122/97 ADSVSQPTV----------------------------------------- Rv1887|M.tuberculosis_H37Rv ADSVSQPTV----------------------------------------- MAV_2814|M.avium_104 ARRSEPVTP----------------------------------------- MAB_4296c|M.abscessus_ATCC_199 LGQAYSLEG---------------PTGTGFAHPDAVTESAGEANTELREF TH_3900|M.thermoresistible__bu LAYSQVPDGGPTVPASVYAAGFGADAATAGGHPYAAYAAFAGAQTQLASI Mflv_3300|M.gilvum_PYR-GCK ---------------HATRRR--RRRWPQALLAAGAITFVASASAAVALQ Mvan_3021|M.vanbaalenii_PYR-1 ---------------PATTRF--ARSAPAVLLAAGVVTFVASVSVAVALA MSMEG_3531|M.smegmatis_MC2_155 ---------------WTSR-----QLAPAAMLLVGVVTFVVSLSLAISQQ MUL_2968|M.ulcerans_Agy99 ---------------APKRSL--HYAGAATTLAAAAVTFVGSLSLAIGLQ MMAR_2779|M.marinum_M ---------------APKRSL--HYAGAATTLAAAAVTFVGSLSLAIGLQ Mb1919|M.bovis_AF2122/97 ---------------APRRSR--HYAGAAAALAAAAVTFVASLSLAVGIQ Rv1887|M.tuberculosis_H37Rv ---------------APRRSR--HYAGAAAALAAAAVTFVASLSLAVGIQ MAV_2814|M.avium_104 ---------------APVRHRRLSYAGAMTALTAGAISFVGSVSLAVGIH MAB_4296c|M.abscessus_ATCC_199 EDFDDQPAE--------RKPFLLVGAPLLLVFGICSIALAVSLTVTVRST TH_3900|M.thermoresistible__bu GGAAPSPVPGEPPVDEDRKPFLLVGSALTSIFVVGVVALVVSLAVSIRPT : :::. * : :: Mflv_3300|M.gilvum_PYR-GCK LTPEPIASP------------PRSAAESPVRQPAAPSP---VPP---APV Mvan_3021|M.vanbaalenii_PYR-1 LTPGQPAPQ------------PRPAAESAAAPPAAAPPRSQVPPPPVAAV MSMEG_3531|M.smegmatis_MC2_155 MSPREQAFERPTRPVVNTSGTPAAVRQLPPALPAAPPPPPQAPP--AAEV MUL_2968|M.ulcerans_Agy99 LTP---------------------ERHHTATGHAGHKP----TP----EI MMAR_2779|M.marinum_M LTP---------------------ERHHTATGHAGHKP----TP----EI Mb1919|M.bovis_AF2122/97 LAP---------------------HNDTGTAKHGAHKP----TP----RI Rv1887|M.tuberculosis_H37Rv LAP---------------------HNDTGTAKHGAHKP----TP----RI MAV_2814|M.avium_104 VGP---------------------ASATAAAKHATHPP----AP----QV MAB_4296c|M.abscessus_ATCC_199 VDQGPSSPDRGV---------VQNPLPAEAPKQAAPPPSPVEAPAPAVSP TH_3900|M.thermoresistible__bu VDQRPSPADS-----------------ALAPGVAAP-----------VQP : . Mflv_3300|M.gilvum_PYR-GCK APAPDPAPEP-----VAPAAEDVPVEAPP-------APQELP-----EQV Mvan_3021|M.vanbaalenii_PYR-1 EPAPVAAVEPAPVAAVEPAPEPVAALVAP-------EPEAPPPVVDEAQS MSMEG_3531|M.smegmatis_MC2_155 AEAVPPAVDPPLADVAESPVEQALPQLPPQLPLPDAATALPPPVVIPAPP MUL_2968|M.ulcerans_Agy99 VEAVAPVVPMP-----AQPEPSAPHQAPA------------------PGA MMAR_2779|M.marinum_M VEAVAPVVPMP-----AQPEPSAPHQAPA------------------PGA Mb1919|M.bovis_AF2122/97 AKAVAPAVPPP-----PTVTPPVPARAPR------------------PAA Rv1887|M.tuberculosis_H37Rv AKAVAPAVPPP-----PTVTPPVPARAPR------------------PAA MAV_2814|M.avium_104 AEAVKAVTPLP-----AAP-QTKPQTKPP------------------SGP MAB_4296c|M.abscessus_ATCC_199 APVQQVVAPAPQHNPAPAPKQVAPAPVQA-----------APQAPAPAPE TH_3900|M.thermoresistible__bu ETVPEALXXXPPH-PSPAPN-VKPLRCAG-----------GFSAVVARTT . Mflv_3300|M.gilvum_PYR-GCK SPDVL--------------------------------------------- Mvan_3021|M.vanbaalenii_PYR-1 VPAPL--------------------------------------------- MSMEG_3531|M.smegmatis_MC2_155 TKKPLLSRIRDRLR------------------------------------ MUL_2968|M.ulcerans_Agy99 GQEP---------------------------------------------- MMAR_2779|M.marinum_M GQEP---------------------------------------------- Mb1919|M.bovis_AF2122/97 QHEPP--------------------------------------------- Rv1887|M.tuberculosis_H37Rv QHEPP--------------------------------------------- MAV_2814|M.avium_104 APAP---------------------------------------------- MAB_4296c|M.abscessus_ATCC_199 APAPAAPAPVPEEQPAPVAPPPAVVPVPIPLFPPVWEPPRRQENPWWPDR TH_3900|M.thermoresistible__bu APGP---------------------------FPTGWS------------- Mflv_3300|M.gilvum_PYR-GCK ------PPATAPVEAVPP------PPPVEP-APAVIPAPVPAERPGILDR Mvan_3021|M.vanbaalenii_PYR-1 ------PEQAPVVEAASPDAGLPTAPPVIP-APEVVP-PVPQERPGILQR MSMEG_3531|M.smegmatis_MC2_155 -GEPDVPEQMVIGEPPPPAEITPIPPPGAPPAPPVDDAPAPEAPP---EP MUL_2968|M.ulcerans_Agy99 ---IRLTAGEQITDAAPVE------QPGGE-APQSEPADGSPMLTRVLTH MMAR_2779|M.marinum_M ---IRLTAGEQITDAAPVE------QPGGE-APQSEPADGSPMLTRVLTH Mb1919|M.bovis_AF2122/97 ---ARVTSGEALTEPNPPEE-----QPNAS-APQQDRNDSQP-ITRVLEH Rv1887|M.tuberculosis_H37Rv ---ARVTSGEALTEPNPPEE-----QPNAS-APQQDRNDSQP-ITRVLEH MAV_2814|M.avium_104 -------AGEP---AAPDEQ-----PGIGD-DRQMESGNRQPYLTRVLEH MAB_4296c|M.abscessus_ATCC_199 DRPRYTPPAQTQQPPIISIPGLPPIGGGDSDRGSHGGSRGGSGRGGWGDD TH_3900|M.thermoresistible__bu ---RRSAAAELVSHATVRCS---------------GDGPGSAGVPGWDPD . Mflv_3300|M.gilvum_PYR-GCK IRDRLSRVG--DP-VVEMPPP------PVPGAPV-APVPPPLP------- Mvan_3021|M.vanbaalenii_PYR-1 IRDRLSNVGPDDPQQAAVPPP------PAP--------APPLP------- MSMEG_3531|M.smegmatis_MC2_155 PPAPEAPPAADPPPPADVPPPDPPPAEPAPVEPEPAPEAPPAP------- MUL_2968|M.ulcerans_Agy99 IPGSYGE--EEGSRPPE--------------------------------- MMAR_2779|M.marinum_M IPGSYGE--EEGSRPPE--------------------------------- Mb1919|M.bovis_AF2122/97 IPGAYG----DSAPPAE--------------------------------- Rv1887|M.tuberculosis_H37Rv IPGAYG----DSAPPAE--------------------------------- MAV_2814|M.avium_104 IPGDTGEPAADSAPHPTLDPQP---------------------------- MAB_4296c|M.abscessus_ATCC_199 GDSRGGSDSGSRGGWGDNGGSRGGWGDSGSSRGGSDSGSRGGWGGNSGSH TH_3900|M.thermoresistible__bu PSIK-----------ADGGRHRFRFAVQMTTRCGLIAHP----------- Mflv_3300|M.gilvum_PYR-GCK ------------------- Mvan_3021|M.vanbaalenii_PYR-1 ------------------- MSMEG_3531|M.smegmatis_MC2_155 ------------------- MUL_2968|M.ulcerans_Agy99 ------------------- MMAR_2779|M.marinum_M ------------------- Mb1919|M.bovis_AF2122/97 ------------------- Rv1887|M.tuberculosis_H37Rv ------------------- MAV_2814|M.avium_104 ------------------- MAB_4296c|M.abscessus_ATCC_199 GGGSGGGSNSGFPWPFGGR TH_3900|M.thermoresistible__bu -------------------