For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. gilvum PYR-GCK Mflv_2773 (-)

annotation: TetR family transcriptional regulator
coordinates: 2918734 - 2919309
length: 191

MMSIRNSEPVEQRILDAAAECIRAYGVERTTVTEIARRAGVSRPTIYRRWPDIRWVIAEVLTVRISDVLA
AVPAAGPGREELVDRVVRIAEHLRRDDIVMSVIFNAPTLAMVYITERLGTSQQLLIDTLAAAIVQGQAHG
SVRAGDPHQMGAMCLLIAQSTIQSAQMVEKFLDRDALNAELAHSLNGYLKP
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_2773--100% (191)TetR family transcriptional regulator
M. gilvum PYR-GCKMflv_3024-7e-0936.13% (119) TetR family transcriptional regulator
M. gilvum PYR-GCKMflv_0492-1e-0840.86% (93) TetR family transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2274c-2e-5158.76% (177) transcriptional regulator
M. tuberculosis H37RvRv2250c-2e-5259.32% (177) transcriptional regulator
M. leprae Br4923MLBr_01733-7e-0630.00% (120) putative TetR-family transcriptional regulator
M. abscessus ATCC 19977MAB_3883c-1e-4549.73% (187) TetR family transcriptional regulator
M. marinum MMMAR_3343-1e-5053.68% (190) transcriptional regulatory protein
M. avium 104MAV_2187-2e-5558.25% (194) transcriptional regulator, TetR family protein
M. smegmatis MC2 155MSMEG_4333-3e-5859.79% (194) transcriptional regulator, TetR family protein
M. thermoresistible (build 8)TH_1508-7e-5961.54% (182) Possible transcriptional regulatory protein
M. ulcerans Agy99MUL_1299-2e-5053.68% (190) transcriptional regulatory protein
M. vanbaalenii PYR-1Mvan_3760-2e-7576.04% (192) TetR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2773|M.gilvum_PYR-GCK          -----------------------------------MMSIRNSE-------
Mvan_3760|M.vanbaalenii_PYR-1       -----------------------------------MVSIRNPER------
Mb2274c|M.bovis_AF2122/97           -----------------------------------MLSMSNDR-------
Rv2250c|M.tuberculosis_H37Rv        -----------------------------------MLSMSNDR-------
MMAR_3343|M.marinum_M               -----------------------------------MLSMSNAP-------
MUL_1299|M.ulcerans_Agy99           -----------------------------------MLSMSNAP-------
MAV_2187|M.avium_104                -----------------------------------MLSIRNDRP------
MSMEG_4333|M.smegmatis_MC2_155      -----------------------------------MVSISNDDA------
TH_1508|M.thermoresistible__bu      --------------------------------------------------
MAB_3883c|M.abscessus_ATCC_199      -----------------------------------MAPLVDAGGGVTVQA
MLBr_01733|M.leprae_Br4923          MTRRSIHTRKPLKWSGCAGQHVRSGKVFDVGRISLSYPSMKPGVKIDARS
                                                                                      

Mflv_2773|M.gilvum_PYR-GCK          --------PVEQRILDAAAECIRAYGVERTTVTEIARRAGVSRPTIYRRW
Mvan_3760|M.vanbaalenii_PYR-1       --------SVEQRILDAAAACILAYGVERTTMTEIARRARVSRPTIYRRW
Mb2274c|M.bovis_AF2122/97           -------ADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRW
Rv2250c|M.tuberculosis_H37Rv        -------ADTGGRILRAAASCVVDYGVDRVTLAEIARRAGVSRPTVYRRW
MMAR_3343|M.marinum_M               -------EDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRW
MUL_1299|M.ulcerans_Agy99           -------EDIGDRILQAAASCVRDYGVDRVTLAEIARRAGVSRPTVYRRW
MAV_2187|M.avium_104                ----DAALDTGERILAAAASCVVDFGVDRVTLAEIARRAGVSRPTVYRRW
MSMEG_4333|M.smegmatis_MC2_155      ----G--ESLGERILEAAASCVMAFGVDRVTLAEIARRAGVSRPTVYRRF
TH_1508|M.thermoresistible__bu      ---------VEDRILDAAAASVLAVGVNRVTLTDIARRARVSRPTIYRRW
MAB_3883c|M.abscessus_ATCC_199      MDAQASADPVTERILDAALSCVTEFGVRRTTLVEVAKRAGVSRPSVYRRW
MLBr_01733|M.leprae_Br4923          ERWREHRKKVRGEIVDAAFRALDRLGP-EVSVREIAEEAGTAKPKIYRHF
                                                .*: **  .:   *  ..:: ::*..* .::*.:**::

Mflv_2773|M.gilvum_PYR-GCK          PDIRWVIAEVLTVR----ISDVLAAVPAAGPGREELVDR----VVRIAEH
Mvan_3760|M.vanbaalenii_PYR-1       PDIRWVIAELLTVR----ITGVLEAVPDRGAGRESVVGR----VVAVADH
Mb2274c|M.bovis_AF2122/97           PDTRSIMASMLTSH----IAAVLREVPLDGDDREALVKQ----IVAVADR
Rv2250c|M.tuberculosis_H37Rv        PDTRSIMASMLTSH----IADVLREVPLDGDDREALVKQ----IVAVADR
MMAR_3343|M.marinum_M               PDTRSIISALLTSH----VTDVVRAVSLDGHDRQTVVRQ----VVAVADR
MUL_1299|M.ulcerans_Agy99           PDTRSIISALLTSH----VTDVVRAVFLDGHDRQTVVRQ----VVAVADR
MAV_2187|M.avium_104                PDTRSIVAALLTRH----VTDVMRAAPLLGDDRESLVRQ----IVTVADL
MSMEG_4333|M.smegmatis_MC2_155      PDTRSILAALLTAR----IVRVLDEVESDARGREALVRR----IVAVAER
TH_1508|M.thermoresistible__bu      PDTNALLASLLTTR----ITAVLDEVPTRGNDRESLVER----IVGFAER
MAB_3883c|M.abscessus_ATCC_199      PDVRTLVAELLTRE----MGSILPATG-RGCARERLVRS----VTGLVTQ
MLBr_01733|M.leprae_Br4923          TDKSDLFEAIGIRLRDMLWAAIFPAIDLATDSAREIIRRSVDEYVSLVDK
                                    .*   :.  :           :.          . ::       . ..  

Mflv_2773|M.gilvum_PYR-GCK          LR-------------RDDIVMSVIFNAPTLAMVYITERLGTSQQLLIDTL
Mvan_3760|M.vanbaalenii_PYR-1       LR-------------ADEIVQSVIRNAPGLAMTYITDRLGTSQQILIDAL
Mb2274c|M.bovis_AF2122/97           LR-------------GDDLIMSVMHS--ELARVYITERLGTSQQVLIEGL
Rv2250c|M.tuberculosis_H37Rv        LR-------------GDDLIMSVMHS--ELARVYITERLGTSQQVLIEGL
MMAR_3343|M.marinum_M               LR-------------GDELVKALMHS--DLARVYITERLGASQHFLLEGL
MUL_1299|M.ulcerans_Agy99           LR-------------GDELVKALMHS--DLARVYITERLGASQHFLLEGL
MAV_2187|M.avium_104                LR-------------QDRLVMSVLHS--ELAPIYITERLGTSQHMLIDAL
MSMEG_4333|M.smegmatis_MC2_155      LR-------------HDEVIMAVLHTAPDVAMVYIAERLGTSQQILIDAV
TH_1508|M.thermoresistible__bu      LR-------------ADEVVMSVLYGAPEFTMVYITDRLGSSQRIMIEAL
MAB_3883c|M.abscessus_ATCC_199      VR-------------EHSIFAAILRSDPELLLTYIVQRLGTSQRALIGWT
MLBr_01733|M.leprae_Br4923          HPNVLRVFIQGRFSAQSEATVRTLDEGREITLTMAEMFNNELREMELNRA
                                                           :     .         .  :.  :   

Mflv_2773|M.gilvum_PYR-GCK          AAAIVQGQAHGSVRAG---------DPHQMGAMCLLIAQSTIQSAQMVEK
Mvan_3760|M.vanbaalenii_PYR-1       AEAIKAGQDEGSIRAG---------DPRGMAAMCLLITQSTIQSAQMVAE
Mb2274c|M.bovis_AF2122/97           AARLTVAQRSGSVRSG---------DARRLATMVLLIAQSTIQSADIVDS
Rv2250c|M.tuberculosis_H37Rv        AARLTVAQRSGSVRSG---------DARRLATMVLLIAQSTIQSADIVDS
MMAR_3343|M.marinum_M               AARLQVAQGTGSVRAG---------DPRKLAAMVLLITQSTIQSVDIIDP
MUL_1299|M.ulcerans_Agy99           AARLQVAQGTGSVRAG---------DPRKLAAMVLLITQSTIQSVDIIDP
MAV_2187|M.avium_104                AARLRVAQRNGSVRPG---------DPVQMATMVLLIAQSTIQSAQIVEP
MSMEG_4333|M.smegmatis_MC2_155      AGEIKIAQEGGSVRAG---------DARQLATMCLLITQSAIQSAQMVAP
TH_1508|M.thermoresistible__bu      AREIAEAQETGTVRAG---------DPHQLAAMCGLIAQSAVQSARIVEP
MAB_3883c|M.abscessus_ATCC_199      AMLIVEGQADGSIRAG---------IPEQMAAMVLLIGQSVLQSARIVAD
MLBr_01733|M.leprae_Br4923          ASELAAFAAFGSVASATEWWLGPEPDSPRRMPREQFVAHLTIIMMAVIVG
                                    *  :      *:: ..          .    .   :: : .:    ::  

Mflv_2773|M.gilvum_PYR-GCK          FLDRDALNAELAHSLNGYLKP-----
Mvan_3760|M.vanbaalenii_PYR-1       LLDNEALNEELAHSLNGYLKP-----
Mb2274c|M.bovis_AF2122/97           ILDSAALATELTHALNGYLC------
Rv2250c|M.tuberculosis_H37Rv        ILDSAALATELTHALNGYLC------
MMAR_3343|M.marinum_M               ILDSEALAAELTYSLNGYLA------
MUL_1299|M.ulcerans_Agy99           ILDSEALAAELTYSLNGYLA------
MAV_2187|M.avium_104                LLDAEALATELAYSLNGYLS------
MSMEG_4333|M.smegmatis_MC2_155      ILDADALARELAYSLNGYLKP-----
TH_1508|M.thermoresistible__bu      FLDSEALAAELRRSLNGYLKP-----
MAB_3883c|M.abscessus_ATCC_199      ILSPDELVDELATAIDGYLKA-----
MLBr_01733|M.leprae_Br4923          TAETLGISMNPDRPIHDAVPLDRSAS
                                      .   :  :   .:.. :