For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQGVELTAQLRAKALWLRSRRRGVLAGYSASAFHGA KWIDADLPAAIIDTNRRRAPGLQVWEERIEPDEICVIEGMRVTTPERTALDLTSRFPLDPAVAAVDALIQ ATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPKETWLRLLLIRAGFPRPQTQIAVRNEWGWAE AHLDMGWQDIKVAAEYDGDHHLTSRYHYRKDILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEARAFRA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1518c | - | - | 100% (280) | hypothetical protein Mb1518c |
M. bovis AF2122 / 97 | Mb3546 | - | 2e-86 | 58.97% (273) | hypothetical protein Mb3546 |
M. bovis AF2122 / 97 | Mb1102 | - | 1e-64 | 47.43% (272) | hypothetical protein Mb1102 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4708 | - | 2e-73 | 50.55% (275) | hypothetical protein Mflv_4708 |
M. tuberculosis H37Rv | Rv1482c | - | 1e-163 | 100.00% (280) | hypothetical protein Rv1482c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1570 | - | 7e-87 | 57.71% (279) | hypothetical protein MAB_1570 |
M. marinum M | MMAR_5026 | - | 1e-76 | 51.79% (280) | hypothetical protein MMAR_5026 |
M. avium 104 | MAV_3296 | - | 1e-115 | 73.57% (280) | hypothetical protein MAV_3296 |
M. smegmatis MC2 155 | MSMEG_5643 | - | 9e-88 | 57.14% (280) | hypothetical protein MSMEG_5643 |
M. thermoresistible (build 8) | TH_1775 | - | 3e-84 | 54.01% (274) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4100 | - | 5e-66 | 52.77% (235) | hypothetical protein MUL_4100 |
M. vanbaalenii PYR-1 | Mvan_1730 | - | 8e-59 | 44.89% (274) | hypothetical protein Mvan_1730 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5026|M.marinum_M -------------MAVPFLGSEAVASGEVRKSALRTRYHRLFPDVYIRCD MUL_4100|M.ulcerans_Agy99 -------------MAVPFLGSEAVAGGEVRKSALRTRYHRLFPDVYIRCD Mb1518c|M.bovis_AF2122/97 -------------MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQG Rv1482c|M.tuberculosis_H37Rv -------------MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQG MAV_3296|M.avium_104 MRHGVGVAQHTFAMTDPFLGSEALAARLLSRHELRSRYVALHRDVYVARD MSMEG_5643|M.smegmatis_MC2_155 -------------MGEPFIGSEALAAGTLTRHQLRSRFIAVYQDIYVEKG TH_1775|M.thermoresistible__bu ---------MAAPFSEPFLGSEALTSGALTRHQLRTRYRAIHRDVYIAND Mflv_4708|M.gilvum_PYR-GCK -------------MGEPFIGSEALRAGRLTRHQLRTAHIAVYPDVYVPVA MAB_1570|M.abscessus_ATCC_1997 -------------MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRG Mvan_1730|M.vanbaalenii_PYR-1 -------------MGGVILGSEAIADGLVTSGRLRFGYSRLYPNVYVPRG : ::****: : ** . :. ::*: MMAR_5026|M.marinum_M AELSPQARARAGWLWSRRRGIVAGLAASALHGARWVDPDAPLDILHVNRN MUL_4100|M.ulcerans_Agy99 AELSPQARARAGWLWSRRRGIVTGLSASALHGARWVDPDAPLDILHVNRN Mb1518c|M.bovis_AF2122/97 VELTAQLRAKALWLRSRRRGVLAGYSASAFHGAKWIDADLPAAIIDTNRR Rv1482c|M.tuberculosis_H37Rv VELTAQLRAKALWLRSRRRGVLAGYSASAFHGAKWIDADLPAAIIDTNRR MAV_3296|M.avium_104 AELTAVVRAKAAWLRSRRRGVLAGFSAAALHGSKWIDAARPAEIIDTNRR MSMEG_5643|M.smegmatis_MC2_155 TLPTAILRAKACWLRSRRRGVLAGYSAAALHGARWIDPGLPAYILDTNRR TH_1775|M.thermoresistible__bu AELDAVLRAKACWLRSRGHGVLAGFSASALHGAKYVDPRRPATVIDTNRR Mflv_4708|M.gilvum_PYR-GCK TTLTAVAKAKAASLWTGREGIIAGQSAAAIHGARWVDARRPAEVLWHNRR MAB_1570|M.abscessus_ATCC_1997 AQLTPLVRAQASWLWTGRRGILAGHSASALHGARWIDAARNAEIVHDNRH Mvan_1730|M.vanbaalenii_PYR-1 QPQSLIDNTVGAWLWSGRRAIVTGRAAAALHGARWVSEKARVELNYNCRR .: . * : ..:::* :*:*:**::::. : *. MMAR_5026|M.marinum_M PRPGIRARGDRIATDEVMQIGGIPVTTPARTALDLGCWYPTGEAVAAIDS MUL_4100|M.ulcerans_Agy99 PRPGIRARGDRIATDEVMQIGGIPVTTPARTALDLGCWYPTGEAVAAIDS Mb1518c|M.bovis_AF2122/97 RAPGLQVWEERIEPDEICVIEGMRVTTPERTALDLTSRFPLDPAVAAVDA Rv1482c|M.tuberculosis_H37Rv RAPGLQVWEERIEPDEICVIEGMRVTTPERTALDLTSRFPLDPAVAAVDA MAV_3296|M.avium_104 HARGVRVWEERIESDEITVVDGTAVTTPARTALDLARRHPRGVAVAAIDA MSMEG_5643|M.smegmatis_MC2_155 PARGVVVWSDAIEDDEICLIGDMRVTTPVRTALDLACKFPEDVAVPAIDS TH_1775|M.thermoresistible__bu RTPGILTWGHTLDEDEICEIDGMRLTTPARTAVDLACRYPVGTSVAAIDA Mflv_4708|M.gilvum_PYR-GCK APRGVLVWSDRVADDEVTTVRGVRVTTPERTALDIACRYPQRRAVAAIDA MAB_1570|M.abscessus_ATCC_1997 RQPGITVWSGEIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDA Mvan_1730|M.vanbaalenii_PYR-1 PPKGIVCRDERIGCDEVIQVGELAVAAAHRTAFDLGRHLPLNSAVVHLDA *: : **: : ::. ***.*: * :* :*: MMAR_5026|M.marinum_M LMRAADVGRAQIETLLHRYPTRRWIRRARRAVERADPGAQSPKETWLRLL MUL_4100|M.ulcerans_Agy99 LMRAADVGRAQIETLLHRYPTRRWIRRARRAVERADPGAQSPKETWLRLL Mb1518c|M.bovis_AF2122/97 LIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPKETWLRLL Rv1482c|M.tuberculosis_H37Rv LIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPKETWLRLL MAV_3296|M.avium_104 LVQATELKMADVELLVDRYRGRHDIKAARAALALVDGGAQSPKESWLRVL MSMEG_5643|M.smegmatis_MC2_155 LARAAKLKVADIELAAEHHAARRGIRQARTIIALVDPGAESPRETWLRLV TH_1775|M.thermoresistible__bu LARAARLKVADIEAAAQRHPGRHGLRRAREAIALVDPGAESPRETALRLL Mflv_4708|M.gilvum_PYR-GCK LARAAHMKLADVELLVDRHTGRRGIRAARAALNLVDPGAESPQETYLRLT MAB_1570|M.abscessus_ATCC_1997 LCRATELQISEALELASRHAGMRGIRRARTAFELVDAGAQSPKETWLRLL Mvan_1730|M.vanbaalenii_PYR-1 LANATGLTRERVLPLLDEYRGARGMKKLRTALDLMDGGAQSPRETWLRLL * .*: : .: : :: * . * **:**:*: **: MMAR_5026|M.marinum_M LLDDGLPRPQTQIRVADEWGELVAYLDMGWEELMVAVEYDGEQHRNDRRQ MUL_4100|M.ulcerans_Agy99 LLDDGLPRPQTQIRVADEWGELVAYLDMGWEELMVAVEYDGEQHRNDRRQ Mb1518c|M.bovis_AF2122/97 LIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYH Rv1482c|M.tuberculosis_H37Rv LIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYH MAV_3296|M.avium_104 LIDAGFPRPQTQIAVRNEWGWAEAYLDMGWEEIKVAAEYDGDQHRASRYQ MSMEG_5643|M.smegmatis_MC2_155 VVRAGYPPPQTQYAVLNEYGALIGEVDMAWPELKIALEYEGQHH-TDPVT TH_1775|M.thermoresistible__bu IVRAGYPPPETQLPIHNEFGVLIGVVDMGWRDRRIAVEYEGRHHFTSRRA Mflv_4708|M.gilvum_PYR-GCK VIGNHFPPPQTQIPVW-DCGALVAELDMGWEHMMIGLDYEGDHHRTTREA MAB_1570|M.abscessus_ATCC_1997 LRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQ Mvan_1730|M.vanbaalenii_PYR-1 LMKD-FPRPTTQIPLFNSRGAPFAYLDMGWEDLKIAVEYDGEHHQKNRDQ : * ** : . :**.* . :. :*:* :* MMAR_5026|M.marinum_M YSWDIRRKEILER-LGWTVIRVLAGDRPTDILRRVRAALVRRASR----- MUL_4100|M.ulcerans_Agy99 -------------------------------------------------- Mb1518c|M.bovis_AF2122/97 YRKDILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEARAFRA------- Rv1482c|M.tuberculosis_H37Rv YRKDILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEARAFRA------- MAV_3296|M.avium_104 YVKDIRRLEMLER-YGWIVVRVIAEDRPDEIIRRVHDARRRRS------- MSMEG_5643|M.smegmatis_MC2_155 LRKDIQRADEMME-NGWIVIRVTARDGEATVLKRVAKAWAS--------- TH_1775|M.thermoresistible__bu INRDIRRHDDMLE-MGWTVLRVTAADTDGGFLRRLETAWSRPAEHS---P Mflv_4708|M.gilvum_PYR-GCK FNKGIRRHDAVTE-LGWTDIRVTCNDTEGAIIARLTTAWRQRLCALGENP MAB_1570|M.abscessus_ATCC_1997 YLKDIRRLEMLEG-MGWLIVRVVAEDHPHDIIRRVREALARRV------- Mvan_1730|M.vanbaalenii_PYR-1 YIWDEQRLRLIRA-RDWLHIKVIKEDEPDDVTARVKRAWALRERAFAVAE MMAR_5026|M.marinum_M ---------------- MUL_4100|M.ulcerans_Agy99 ---------------- Mb1518c|M.bovis_AF2122/97 ---------------- Rv1482c|M.tuberculosis_H37Rv ---------------- MAV_3296|M.avium_104 ---------------- MSMEG_5643|M.smegmatis_MC2_155 -------RS------- TH_1775|M.thermoresistible__bu AQHSPAQRSPAQRS-- Mflv_4708|M.gilvum_PYR-GCK DAGPPWTHVRRQRPGQ MAB_1570|M.abscessus_ATCC_1997 ---------------- Mvan_1730|M.vanbaalenii_PYR-1 RVS-------------