For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGAQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVIAAWLWSGRKGVIAGASASALHG AKWVDDHALVELIWRNARAPNGVRTKDELLLDGEVQRLCGLTVTTVERTAFDLGRRPPLGQAITRLDALA NATDFKINDVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWLRLLLINAGFPRPSTQIPLLGVYGHP KYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVERLEYIRRAGWTHIRVLADHKGPDVVRRVRQAWDTLT SRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1102 | - | - | 100% (283) | hypothetical protein Mb1102 |
M. bovis AF2122 / 97 | Mb3546 | - | 4e-74 | 48.01% (277) | hypothetical protein Mb3546 |
M. bovis AF2122 / 97 | Mb3741c | - | 2e-70 | 51.11% (270) | hypothetical protein Mb3741c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4733 | - | 9e-67 | 47.04% (270) | hypothetical protein Mflv_4733 |
M. tuberculosis H37Rv | Rv1073 | - | 1e-166 | 100.00% (283) | hypothetical protein Rv1073 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1570 | - | 8e-65 | 44.49% (272) | hypothetical protein MAB_1570 |
M. marinum M | MMAR_0712 | - | 2e-85 | 55.31% (273) | hypothetical protein MMAR_0712 |
M. avium 104 | MAV_4752 | - | 7e-83 | 54.18% (275) | hypothetical protein MAV_4752 |
M. smegmatis MC2 155 | MSMEG_0785 | - | 1e-79 | 50.18% (279) | hypothetical protein MSMEG_0785 |
M. thermoresistible (build 8) | TH_3202 | - | 1e-62 | 49.80% (247) | PUTATIVE conserved hypothetical protein |
M. ulcerans Agy99 | MUL_2811 | - | 2e-84 | 54.98% (271) | hypothetical protein MUL_2811 |
M. vanbaalenii PYR-1 | Mvan_1730 | - | 4e-69 | 48.15% (270) | hypothetical protein Mvan_1730 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1102|M.bovis_AF2122/97 MG--AQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVI Rv1073|M.tuberculosis_H37Rv MG--AQPFIGSEALAAGLISWHELGKYYTAIMPNVYLDKRLKPSLRQRVI MAB_1570|M.abscessus_ATCC_1997 MG---EPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRGAQLTPLVRAQ MSMEG_0785|M.smegmatis_MC2_155 MT---APFLGSEALADGTLNRHQLRTRFRTLYPNVYVPKTSEPTLEQRTV MMAR_0712|M.marinum_M MCDLRAPFIGSKALACGAVTRHQLRTRYRPVLPNVYLSAGVHPCLQSRIA MUL_2811|M.ulcerans_Agy99 MCDLRAPFIGSKALACGAVTRHQLRTRYRPVLPNVYLSAGVHPCLQSRIA MAV_4752|M.avium_104 MG--EAPVVGSEELASGRLNRHRLRVAYRPVFPNVYLPAQVEPTLPLRIR TH_3202|M.thermoresistible__bu ----------------------------------VYTQREARLTLGQRVH Mflv_4733|M.gilvum_PYR-GCK MG---TILIGTEAVAEGLVTPGQLRYGYRRLFPDVYVPKAQPQSLADDAI Mvan_1730|M.vanbaalenii_PYR-1 MG---GVILGSEAIADGLVTSGRLRFGYSRLYPNVYVPRGQPQSLIDNTV ** Mb1102|M.bovis_AF2122/97 AAWLWSGRKGVIAGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDE Rv1073|M.tuberculosis_H37Rv AAWLWSGRKGVIAGASASALHGAKWVDDHALVELIWRNARAPNGVRTKDE MAB_1570|M.abscessus_ATCC_1997 ASWLWTGRRGILAGHSASALHGARWIDAARNAEIVHDNRHRQPGITVWSG MSMEG_0785|M.smegmatis_MC2_155 GAWLWSGRRAVIAGPAAAALHGAKWIDPSIPIDLIHDNPRQPRGITTRRD MMAR_0712|M.marinum_M AAWLWSRGSATVGGAAAAALHGAKWIPEDVPVELICARSRPPRGVLTRRD MUL_2811|M.ulcerans_Agy99 AAWLWSRGSATVGGAAAAALHGAKWIPEDVPVELICARSSPPRGVLTRRD MAV_4752|M.avium_104 AAWLWSGRTAVIAGAAAAAVHGAAWIPDAVPIELIHHNTRAPDGVLIRRD TH_3202|M.thermoresistible__bu AAWLWSRRRGTIAGSAAAAVHGTKWIDVDTPVELVHTNPRPPDGIVTRRC Mflv_4733|M.gilvum_PYR-GCK GAWLWSGRRGIVTVRAAASLHGARWVNSETPVELIYDCRRRPNGIIARNE Mvan_1730|M.vanbaalenii_PYR-1 GAWLWSGRRAIVTGRAAAALHGARWVSEKARVELNYNCRRPPKGIVCRDE .:***: . : :*:::**: *: :: *: Mb1102|M.bovis_AF2122/97 LLLDGEVQRLCGLTVTTVERTAFDLGRRPPLGQAITRLDALANATDFKIN Rv1073|M.tuberculosis_H37Rv LLLDGEVQRLCGLTVTTVERTAFDLGRRPPLGQAITRLDALANATDFKIN MAB_1570|M.abscessus_ATCC_1997 EIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDALCRATELQIS MSMEG_0785|M.smegmatis_MC2_155 TLLPGETVVIGGMLLTSSARTAFDIGRRSPTNRGVAHLDALLRATGCTVA MMAR_0712|M.marinum_M VLIDGETQFLGGYSVTTAERTAFDIGRRGAMRSAVVRLDALARATGFTVA MUL_2811|M.ulcerans_Agy99 VLIDGETQFLGGYSVTTAERTAFDIGRRGAMRSAVVRLDALARATGFTVA MAV_4752|M.avium_104 GLCPGETQICDGLAVTTPERTAFDIGRRGAVRSAVVRLDSLARATGFKAD TH_3202|M.thermoresistible__bu LLFDDEVTTIDGRPVTTPERTAFDIGRRGSIMSTVPRLDALVNATGIKLD Mflv_4733|M.gilvum_PYR-GCK RIDWDEIVDNGQLSLATVERTAVDLGRHLPLGRAVAHLDALANATGLTAE Mvan_1730|M.vanbaalenii_PYR-1 RIGCDEVIQVGELAVAAAHRTAFDLGRHLPLNSAVVHLDALANATGLTRE : .* :: ***.*:. : . : :*:* .** Mb1102|M.bovis_AF2122/97 DVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWLRLLLINAGFPRPS Rv1073|M.tuberculosis_H37Rv DVRELARKHPHTRGLRQLDKALDLVDPGAQSPKETWLRLLLINAGFPRPS MAB_1570|M.abscessus_ATCC_1997 EALELASRHAGMRGIRRARTAFELVDAGAQSPKETWLRLLLRDAGLPPVS MSMEG_0785|M.smegmatis_MC2_155 DIADLANRHRGARGLRRLEATLPLVDAGAQSPKETWLRLLIVRDGLPKPT MMAR_0712|M.marinum_M DVLQVARNHRGTRGLRQLETALELVDPGAQSPRESYLRLFLIDAGLPRPQ MUL_2811|M.ulcerans_Agy99 DVLQVARNHRGTRGLRQLETALELVDPGAQSPRESYLRLFLIDAGLPRPQ MAV_4752|M.avium_104 DVLRVAGAHPRSPGLRRLEAALGLVDPGAQSPRESYLRLLLIDAGLPRPQ TH_3202|M.thermoresistible__bu DIARLAARHPGARGLRLLETVLELVDGGAQSPKESQVRLWLIEAGFPVPH Mflv_4733|M.gilvum_PYR-GCK SVYPLVDRYSGARGMKTLRKALDLMDGGAESPKETWLRLLLMRE-FPRPQ Mvan_1730|M.vanbaalenii_PYR-1 RVLPLLDEYRGARGMKKLRTALDLMDGGAQSPRETWLRLLLMKD-FPRPT : : *:: .: *:* **:**:*: :** : :* Mb1102|M.bovis_AF2122/97 TQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVERLEY Rv1073|M.tuberculosis_H37Rv TQIPLLGVYGHPKYFLDMGWEDIMLAVEYDGEQHRLSRDQFVKDVERLEY MAB_1570|M.abscessus_ATCC_1997 TQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQYLKDIRRLEM MSMEG_0785|M.smegmatis_MC2_155 TQIPVLADDGTPLAYLDMGWEEWMVAVEYDGDQHRTDRRQYVRDIRRLEL MMAR_0712|M.marinum_M TQLPVLGVNGMPVAYLDMGWERYMVAVEYDGDHHRSDRQQYVKDIRRGEM MUL_2811|M.ulcerans_Agy99 TQLPVLGVNGMPVAYLDMGWERYMVAVEYDGDHHRSDRQQYVKDIRRGEM MAV_4752|M.avium_104 TQVPVPGADGLPVAYLDMGWPEWMVAVEYDGDHHRTDRRQYVKDIRRLEM TH_3202|M.thermoresistible__bu TQIPVCDSDGVPFAFLDMGWPEWLLAVEYEGEHHR-ERFRYTGDIHRLEK Mflv_4733|M.gilvum_PYR-GCK TQIPLVDEWGMPLIRLDMGWEAAKIAVEYDGAHHQENRSQYVTDERRLRL Mvan_1730|M.vanbaalenii_PYR-1 TQIPLFNSRGAPFAYLDMGWEDLKIAVEYDGEHHQKNRDQYIWDEQRLRL **: : . :**** :.:**:* :*: .* :: * .* . Mb1102|M.bovis_AF2122/97 IRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR------- Rv1073|M.tuberculosis_H37Rv IRRAGWTHIRVLADHKGPDVVRRVRQAWDTLTSRR------- MAB_1570|M.abscessus_ATCC_1997 LEGMGWLIVRVVAEDHPHDIIRRVREALARRV---------- MSMEG_0785|M.smegmatis_MC2_155 LAELGWIVIRVVAEDGTAEILRRIRAALTARQSTVRSGRKAS MMAR_0712|M.marinum_M LERMGWIVIRVVAEDRRVDILRRVTAALDERRSAVP------ MUL_2811|M.ulcerans_Agy99 LERMGWIVIRVVAEDRRVDILRRVTAALAERRSAVP------ MAV_4752|M.avium_104 LEQLGWVIVRVVAEDRPADIVRRVRAALAKSGVAPRLSV--- TH_3202|M.thermoresistible__bu VQQQ-WSVVRLTADDTQVSAIHRVHRAVSALGVNCPCRL--- Mflv_4733|M.gilvum_PYR-GCK IQARDWLYVKVIKEDKPAEILARVRRAWALRETATTVAKRAS Mvan_1730|M.vanbaalenii_PYR-1 IRARDWLHIKVIKEDEPDDVTARVKRAWALRERAFAVAERVS : * ::: :. . *: *