For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRHGVGVAQHTFAMTDPFLGSEALAARLLSRHELRSRYVALHRDVYVARDAELTAVVRAKAAWLRSRRRG VLAGFSAAALHGSKWIDAARPAEIIDTNRRHARGVRVWEERIESDEITVVDGTAVTTPARTALDLARRHP RGVAVAAIDALVQATELKMADVELLVDRYRGRHDIKAARAALALVDGGAQSPKESWLRVLLIDAGFPRPQ TQIAVRNEWGWAEAYLDMGWEEIKVAAEYDGDQHRASRYQYVKDIRRLEMLERYGWIVVRVIAEDRPDEI IRRVHDARRRRS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3296 | - | - | 100% (292) | hypothetical protein MAV_3296 |
M. avium 104 | MAV_3351 | - | 1e-89 | 57.91% (278) | hypothetical protein MAV_3351 |
M. avium 104 | MAV_0642 | - | 8e-87 | 58.06% (279) | hypothetical protein MAV_0642 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1518c | - | 1e-115 | 73.57% (280) | hypothetical protein Mb1518c |
M. gilvum PYR-GCK | Mflv_4708 | - | 2e-76 | 52.88% (278) | hypothetical protein Mflv_4708 |
M. tuberculosis H37Rv | Rv1482c | - | 1e-115 | 73.57% (280) | hypothetical protein Rv1482c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1570 | - | 1e-88 | 59.35% (278) | hypothetical protein MAB_1570 |
M. marinum M | MMAR_5026 | - | 1e-82 | 54.84% (279) | hypothetical protein MMAR_5026 |
M. smegmatis MC2 155 | MSMEG_5917 | - | 1e-82 | 55.47% (274) | hypothetical protein MSMEG_5917 |
M. thermoresistible (build 8) | TH_1775 | - | 6e-83 | 53.26% (276) | conserved hypothetical protein |
M. ulcerans Agy99 | MUL_4737 | - | 3e-70 | 51.09% (276) | hypothetical protein MUL_4737 |
M. vanbaalenii PYR-1 | Mvan_5526 | - | 3e-63 | 48.20% (278) | hypothetical protein Mvan_5526 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1518c|M.bovis_AF2122/97 -------------MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQG Rv1482c|M.tuberculosis_H37Rv -------------MTDPFLGSEALAAGVLTPYELRSRYVALHKDVYVPQG MAV_3296|M.avium_104 MRHGVGVAQHTFAMTDPFLGSEALAARLLSRHELRSRYVALHRDVYVARD Mflv_4708|M.gilvum_PYR-GCK -------------MGEPFIGSEALRAGRLTRHQLRTAHIAVYPDVYVPVA MSMEG_5917|M.smegmatis_MC2_155 -------------MGDPVIGTEAVAAGFATPYQLRSRYWPVYPGIYVPKD TH_1775|M.thermoresistible__bu ---------MAAPFSEPFLGSEALTSGALTRHQLRTRYRAIHRDVYIAND MAB_1570|M.abscessus_ATCC_1997 -------------MGEPFVGSEAVRSGRLTAYALRTRYVAIHPDVYLPRG MMAR_5026|M.marinum_M -------------MAVPFLGSEAVASGEVRKSALRTRYHRLFPDVYIRCD MUL_4737|M.ulcerans_Agy99 ---MDAREARAARSEDVFVGSGAVRRGRLSPYRLRTEFRAIYPDVYLPAH Mvan_5526|M.vanbaalenii_PYR-1 ----------MPGMGEVILGGEAVRAGVVTRHELARWYTPLYRGVFVRKG .:* *: * . :. .::: Mb1518c|M.bovis_AF2122/97 VELTAQLRAKALWLRSRRRGVLAGYSASAFHGAKWIDADLPAAIIDTNRR Rv1482c|M.tuberculosis_H37Rv VELTAQLRAKALWLRSRRRGVLAGYSASAFHGAKWIDADLPAAIIDTNRR MAV_3296|M.avium_104 AELTAVVRAKAAWLRSRRRGVLAGFSAAALHGSKWIDAARPAEIIDTNRR Mflv_4708|M.gilvum_PYR-GCK TTLTAVAKAKAASLWTGREGIIAGQSAAAIHGARWVDARRPAEVLWHNRR MSMEG_5917|M.smegmatis_MC2_155 TQPTAALRAKAAWLWSDRRAVLAGRSASALHRSRWLDPRAPAELIHDNRR TH_1775|M.thermoresistible__bu AELDAVLRAKACWLRSRGHGVLAGFSASALHGAKYVDPRRPATVIDTNRR MAB_1570|M.abscessus_ATCC_1997 AQLTPLVRAQASWLWTGRRGILAGHSASALHGARWIDAARNAEIVHDNRH MMAR_5026|M.marinum_M AELSPQARARAGWLWSRRRGIVAGLAASALHGARWVDPDAPLDILHVNRN MUL_4737|M.ulcerans_Agy99 AAPSFRTRCKAAWLWTGRRGVLGGLAAAGLHGSDWIGDDEPVELIWRNPH Mvan_5526|M.vanbaalenii_PYR-1 VEVTLRDRAVGAWLATGRKGVIAGLAAAALHGAAWIDADIPIEVAGVKRR . :. . * : ..::.* :*:.:* : ::. : : . Mb1518c|M.bovis_AF2122/97 RAPGLQVWEERIEPDEICVIEGMRVTTPERTALDLTSRFPLDPAVAAVDA Rv1482c|M.tuberculosis_H37Rv RAPGLQVWEERIEPDEICVIEGMRVTTPERTALDLTSRFPLDPAVAAVDA MAV_3296|M.avium_104 HARGVRVWEERIESDEITVVDGTAVTTPARTALDLARRHPRGVAVAAIDA Mflv_4708|M.gilvum_PYR-GCK APRGVLVWSDRVADDEVTTVRGVRVTTPERTALDIACRYPQRRAVAAIDA MSMEG_5917|M.smegmatis_MC2_155 PPCGIKTWLDRFEDDEITVVDGIRVTTPARTAVDLACRYPLDTAVTLIDA TH_1775|M.thermoresistible__bu RTPGILTWGHTLDEDEICEIDGMRLTTPARTAVDLACRYPVGTSVAAIDA MAB_1570|M.abscessus_ATCC_1997 RQPGITVWSGEIAPDEICVVRGMRATTAARTALDLACRCPRGRAVAAIDA MMAR_5026|M.marinum_M PRPGIRARGDRIATDEVMQIGGIPVTTPARTALDLGCWYPTGEAVAAIDS MUL_4737|M.ulcerans_Agy99 PPAGVITRNQRIEPDEVTRVAGLAVTTLARTAFDLGRQLPGGESVARLDA Mvan_5526|M.vanbaalenii_PYR-1 SHAGLITRSEVIATDEIVRRAGLPVTSRTRTAFDLGRQLDRAEALARLDA *: . . **: * *: ***.*: ::: :*: Mb1518c|M.bovis_AF2122/97 LIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPKETWLRLL Rv1482c|M.tuberculosis_H37Rv LIQATDLKVADVEPLIERYRGRRGMKAARAALDLVDGGAQSPKETWLRLL MAV_3296|M.avium_104 LVQATELKMADVELLVDRYRGRHDIKAARAALALVDGGAQSPKESWLRVL Mflv_4708|M.gilvum_PYR-GCK LARAAHMKLADVELLVDRHTGRRGIRAARAALNLVDPGAESPQETYLRLT MSMEG_5917|M.smegmatis_MC2_155 LGNATRLKMADVELLVDRYRGRRGIKNARHVLDLVDGGAESPRETWLRLE TH_1775|M.thermoresistible__bu LARAARLKVADIEAAAQRHPGRHGLRRAREAIALVDPGAESPRETALRLL MAB_1570|M.abscessus_ATCC_1997 LCRATELQISEALELASRHAGMRGIRRARTAFELVDAGAQSPKETWLRLL MMAR_5026|M.marinum_M LMRAADVGRAQIETLLHRYPTRRWIRRARRAVERADPGAQSPKETWLRLL MUL_4737|M.ulcerans_Agy99 LMRATAFSGEDVLLLAKRYSGARGLRRLRATLPLVDAGAASPRESWLRMV Mvan_5526|M.vanbaalenii_PYR-1 LMWNQPFSIDEVAELADRRPRVPGVGQLRDLLPLIDGGAASPRQSRLRLW * . : * : * . * ** **::: **: Mb1518c|M.bovis_AF2122/97 LIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYH Rv1482c|M.tuberculosis_H37Rv LIRAGFPRPQTQIAVRNEWGWAEAHLDMGWQDIKVAAEYDGDHHLTSRYH MAV_3296|M.avium_104 LIDAGFPRPQTQIAVRNEWGWAEAYLDMGWEEIKVAAEYDGDQHRASRYQ Mflv_4708|M.gilvum_PYR-GCK VIGNHFPPPQTQIPVWD-CGALVAELDMGWEHMMIGLDYEGDHHRTTREA MSMEG_5917|M.smegmatis_MC2_155 VIRGGFPRPQTQIPVHDEYGVLVGVFDMGWEDAMVGLDYEGDQHRTDRRR TH_1775|M.thermoresistible__bu IVRAGYPPPETQLPIHNEFGVLIGVVDMGWRDRRIAVEYEGRHHFTSRRA MAB_1570|M.abscessus_ATCC_1997 LRDAGLPPVSTQILVHNGDFVALAYIDMGWEDVMVGIEYDGDQHRSDRRQ MMAR_5026|M.marinum_M LLDDGLPRPQTQIRVADEWGELVAYLDMGWEELMVAVEYDGEQHRNDRRQ MUL_4737|M.ulcerans_Agy99 LIDAGLPVPVTQIPVHQ-NWRLVAVLDMGWQKYQVAAEYDGDQHRFDRRQ Mvan_5526|M.vanbaalenii_PYR-1 LLDCGFPRPQTQIPVLE-GSRPVAFLDMGWPEYQVAVEYDGDHHRKNRDQ : * **: : : . .**** . :. :*:* :* * Mb1518c|M.bovis_AF2122/97 YRKDILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEARAFRA------- Rv1482c|M.tuberculosis_H37Rv YRKDILRHEKVQHRYGWIVVRVVAEDHPADIIRRVGEARAFRA------- MAV_3296|M.avium_104 YVKDIRRLEMLER-YGWIVVRVIAEDRPDEIIRRVHDARRRRS------- Mflv_4708|M.gilvum_PYR-GCK FNKGIRRHDAVTE-LGWTDIRVTCNDTEGAIIARLTTAWRQRLCALGENP MSMEG_5917|M.smegmatis_MC2_155 FNRDIHKSEDVRR-LGWTHIRVTAQDGEADILKRIEAAGVPR-------- TH_1775|M.thermoresistible__bu INRDIRRHDDMLE-MGWTVLRVTAADTDGGFLRRLETAWSRP-------A MAB_1570|M.abscessus_ATCC_1997 YLKDIRRLEMLEG-MGWLIVRVVAEDHPHDIIRRVREALARRV------- MMAR_5026|M.marinum_M YSWDIRRKEILER-LGWTVIRVLAGDRPTDILRRVRAALVRRASR----- MUL_4737|M.ulcerans_Agy99 YAREQWRLRKLDE-LGWIVIRVIAGDAPEDVVRRVRQALARRGHRET--- Mvan_5526|M.vanbaalenii_PYR-1 YVKDIARLRMLEA-LGWIVIRVIAEDRPAHWLERTEAALQSRGCRLAATE : : ** :** . * : * * Mb1518c|M.bovis_AF2122/97 ------------------ Rv1482c|M.tuberculosis_H37Rv ------------------ MAV_3296|M.avium_104 ------------------ Mflv_4708|M.gilvum_PYR-GCK DAGPPWTHVRRQRPGQ-- MSMEG_5917|M.smegmatis_MC2_155 --GP---RV--------- TH_1775|M.thermoresistible__bu EHSPAQHSPAQRSPAQRS MAB_1570|M.abscessus_ATCC_1997 ------------------ MMAR_5026|M.marinum_M ------------------ MUL_4737|M.ulcerans_Agy99 ------------------ Mvan_5526|M.vanbaalenii_PYR-1 LQLFVRTLAA--------