For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSTDIGRTAGQKAQRIHWAWVVAAVSFVAILGAAGFRSIPGVMMNPLHHEFGWTHGTVGLAMSVNMMLYG LTAPFAAALMDRFGVRPVLTVSLLLITTGSALSITMTASWQLVLLWGVLVGIGTGSISMGFVATIATRWF EQRRGLVTGVLTAASATGQLIFLPIVAAVTTHHGWRWASLIVAAAALAVVPLVAVFMRNYPADKGLAPYG AEEAQAAAPVVPASSFAAAFDGLRLGARSRAFWLLAASFAICGMTTNGLIATHFIPAANDHGMPTTVAAG LLATIGILDVAGTVFSGWLTDRVDPRVLLLVYYAGRGVSLLLLPSLLSPQAEPSTWVFVVFYGLDWVATV PPTIVLCRDFFGTRSPVVFGWVFASHQVGAAIAAAGAGWLRDLNGNYDMAFYLAAGLCFIAAVFSASIGK SQVSSEEADSVETSALP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5194 | - | - | 100% (437) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_4147 | - | 4e-22 | 26.85% (406) | major facilitator superfamily protein MFS_1, putative |
M. smegmatis MC2 155 | MSMEG_0164 | - | 1e-14 | 24.81% (403) | transmembrane transport protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1766c | narK2 | 4e-14 | 24.44% (446) | nitrate/nitrite transporter NarK2 |
M. gilvum PYR-GCK | Mflv_1096 | - | 2e-26 | 28.12% (384) | major facilitator transporter |
M. tuberculosis H37Rv | Rv1737c | narK2 | 4e-14 | 24.44% (446) | nitrate/nitrite transporter NarK2 |
M. leprae Br4923 | MLBr_00556 | - | 6e-05 | 23.16% (177) | putative integral membrane drug transport protein |
M. abscessus ATCC 19977 | MAB_4839c | - | 3e-11 | 24.18% (273) | MFS family transporter |
M. marinum M | MMAR_1879 | - | 1e-08 | 23.67% (414) | drug-transport integral membrane protein |
M. avium 104 | MAV_3974 | - | 2e-11 | 24.26% (371) | permease of the major facilitator superfamily protein |
M. thermoresistible (build 8) | TH_0390 | - | 7e-12 | 23.54% (412) | major facilitator superfamily protein permease |
M. ulcerans Agy99 | MUL_3826 | - | 9e-07 | 27.72% (184) | hypothetical protein MUL_3826 |
M. vanbaalenii PYR-1 | Mvan_3219 | - | 2e-12 | 25.26% (380) | major facilitator superfamily transporter |
CLUSTAL 2.0.9 multiple sequence alignment MAB_4839c|M.abscessus_ATCC_199 ----------MSTAAVHAQPHSITGLRGVLITLCLTEITSWG--VLYYAF Mvan_3219|M.vanbaalenii_PYR-1 ----------MAESDRADR-------RSVLLTLCLTEITSWG--VLYYAF Mb1766c|M.bovis_AF2122/97 ----------MRGQAAN-----------LVLATWISVVNFW----AWNLI Rv1737c|M.tuberculosis_H37Rv ----------MRGQAAN-----------LVLATWISVVNFW----AWNLI Mflv_1096|M.gilvum_PYR-GCK ----------MGGPVTRFDSAAIAEWRRYGTVPLAAGLGYSMGVIHVYSL MSMEG_5194|M.smegmatis_MC2_155 ----------MSTDIGRTAGQKAQRIHWAWVVAAVSFVAILGAAGFRSIP TH_0390|M.thermoresistible__bu -------MNPGRRARTAAGDDDERLAVRPWIVWATGLLAYIVAVLDRTTL MAV_3974|M.avium_104 ----------------------------------MVALGYG-------VI MMAR_1879|M.marinum_M ------------MPASPGIRCNAAPVQTHRDTLWAIAIGIFMTSVDDTVV MLBr_00556|M.leprae_Br4923 ----------MSTRAGR------------RVAISAGSLAVLLGALDTYVV MUL_3826|M.ulcerans_Agy99 MMRPRATVAAATPTTDLAAGRALITPRRRNFIFVALVLGILLSSLDQTIV : MAB_4839c|M.abscessus_ATCC_199 PVLAPRITADTGWSA---PAVTAAFSAALVVAAAAGIGVGRWLDRHGPR- Mvan_3219|M.vanbaalenii_PYR-1 SVLSPAICADTGWSA---PAVTAAFSAGLVISALLGIPVGRWLDRHGPR- Mb1766c|M.bovis_AF2122/97 GPLSTSYARDMSLSS---AEASLLVATPILVGALGRIVTGPLTDRFGGR- Rv1737c|M.tuberculosis_H37Rv GPLSTSYARDMSLSS---AEASLLVATPILVGALGRIVTGPLTDRFGGR- Mflv_1096|M.gilvum_PYR-GCK GAFMGPLQDEFGWSR---AQASVGLTIVGMAAAVAALPIGLMVDRLGPRR MSMEG_5194|M.smegmatis_MC2_155 GVMMNPLHHEFGWTH---GTVGLAMSVNMMLYGLTAPFAAALMDRFGVR- TH_0390|M.thermoresistible__bu GVSGLAAADRFNAAP---AALSTFVVLQVIVYALAQVPAGLLLDRFGSK- MAV_3974|M.avium_104 SPALPTFARSFGVSI---KAVTFLVTVFSLSRLCFAPISGLLTERLGER- MMAR_1879|M.marinum_M YVANPSIMAGLNTSY---HMVIWVTSGYVLAYTVPSLVAGRLGDRFGVK- MLBr_00556|M.leprae_Br4923 VTIMRDIMHDVGIPVNQMQRITWIVTMYLLGYIAAMPLLSRASDRFGRKL MUL_3826|M.ulcerans_Agy99 AIALPTIVADLGEAG----RQSWVVTSYLLASTIATALVGKLGDMFGRK- . . : . : * : MAB_4839c|M.abscessus_ATCC_199 --WLMTAGSLWGPAALIGVAMAPNYGWFLAAWLMAG-IAMAAVFYPPAFA Mvan_3219|M.vanbaalenii_PYR-1 --WIMTGGSVLGSIALAGVAAAPDVVSFTAAWVVAG-VAMSAVFYAPAFA Mb1766c|M.bovis_AF2122/97 --AMLIAVTLASILPVLAVGVAATMGSYALLVFFGLFLGVAGTIFAVGIP Rv1737c|M.tuberculosis_H37Rv --AMLIAVTLASILPVLAVGVAATMGSYALLVFFGLFLGVAGTIFAVGIP Mflv_1096|M.gilvum_PYR-GCK V-GIIGAGLMAGAFALLGTATG-TMGNWILLWSVLA-FACFWVQTTVWTS MSMEG_5194|M.smegmatis_MC2_155 --PVLTVSLLLITTGSALSITMTASWQLVLLWGVLVGIGTGSISMGFVAT TH_0390|M.thermoresistible__bu --ALIVAGAAVMATGQLILAFTESLTLAILARAIVG--LGDAVTFISVLR MAV_3974|M.avium_104 --RIYIGGLLIVAVSTAACAFSQAYWQLMLCRVFSG--VGSTMFYVSALG MMAR_1879|M.marinum_M --NLYLAGLAVFTVSSLWCGVSGTIEILIAARVAQG--IGAALLYTQTFT MLBr_00556|M.leprae_Br4923 LLQVSLAGFAIGSVMTALAGQFGDFHMLIAGRTIQG--VASGALLPITLA MUL_3826|M.ulcerans_Agy99 --RVFQVAVLLFVAGSVSCGLTQSMTMLVASRALQG--VGGGAITVTAIA : MAB_4839c|M.abscessus_ATCC_199 ALTRWYGPGAVRALMVLTLVAGLASTVFVP-LTAVLASHMD-WRTTYLAL Mvan_3219|M.vanbaalenii_PYR-1 ALTRYFRPDAVRALTALTLAAGLASTVFAP-LTAAISAHMD-WRETYLVL Mb1766c|M.bovis_AF2122/97 FANNWYQP-ARRGFSTGVFGMGMVGTALSAFFTPRFVRWFG-LFTTHAIV Rv1737c|M.tuberculosis_H37Rv FANNWYQP-ARRGFSTGVFGMGMVGTALSAFFTPRFVRWFG-LFTTHAIV Mflv_1096|M.gilvum_PYR-GCK AVASRFETSRGLAFAVTLSGGSLAAAVFPP-LATLLIGEWG-WRGALFGL MSMEG_5194|M.smegmatis_MC2_155 IATRWFEQRRGLVTGVLTAASATGQLIFLP-IVAAVTTHHG-WRWASLIV TH_0390|M.thermoresistible__bu LVPHWFRPRQVPLVTQLTGICGQLGQVLSAVLFLALLTARG-WTPAYLSV MAV_3974|M.avium_104 LMIHISPADARGRIAGLFTTSFMVGAVGGP-AVGGLAAGWG-LTAPFVVY MMAR_1879|M.marinum_M IVTRAFPPERRGAAATVWAAAAGFGNLVGPLLGGALVDTLG-WQWIFFVN MLBr_00556|M.leprae_Br4923 LGADLWAQRNRAGVLGGIGAAQELGSVLGPLYGIFIVWLFSDWRYVFWIN MUL_3826|M.ulcerans_Agy99 LIGEVVPLRDRGRYQGILGAVIGIATIGGPLLGGYFTDCLG-WRWAFWIN . . . MAB_4839c|M.abscessus_ATCC_199 A------------------------------VLLTIITVPAHIIGLRRPW Mvan_3219|M.vanbaalenii_PYR-1 A------------------------------AAMAVITVPAHFFGLRRPW Mb1766c|M.bovis_AF2122/97 A------------------------------AALASTAVVAMVVLRDAPY Rv1737c|M.tuberculosis_H37Rv A------------------------------AALASTAVVAMVVLRDAPY Mflv_1096|M.gilvum_PYR-GCK GGL---------------------------WGGLVLIVVLLFFRGAQDDK MSMEG_5194|M.smegmatis_MC2_155 AA-----------------------------AALAVVPLVAVFMRNYPAD TH_0390|M.thermoresistible__bu VA-----------------------------LGVLTIALTLALVQNTPDG MAV_3974|M.avium_104 G------------------------------VAMLGVALVLFLGLRNSAL MMAR_1879|M.marinum_M IPVGIVGLVLAVRFVPALP--THARRFDLIGVGLSGLGLLLIVFGLQQGH MLBr_00556|M.leprae_Br4923 IPLTAIAMLMIQVSLSAHDRGDELEKVDVVGGVLLAIALGLVVIGLYNPQ MUL_3826|M.ulcerans_Agy99 LPVSAVVICVATAAIPALAATTR---PVIDYAGIMFIGLSLAALTLATSL : : MAB_4839c|M.abscessus_ATCC_199 P----------------SLPATHLAESPTRIARS--------RPFISLII Mvan_3219|M.vanbaalenii_PYR-1 P----------------HIEHHHLVEPPTRIARS--------RQFVALTV Mb1766c|M.bovis_AF2122/97 F----------------RPNADPVLPRLKAAARLP------VTWEMSFLY Rv1737c|M.tuberculosis_H37Rv F----------------RPNADPVLPRLKAAARLP------VTWEMSFLY Mflv_1096|M.gilvum_PYR-GCK K----------------PAPARTVIAPTAAAADLPGVTLAEGLRSATFYK MSMEG_5194|M.smegmatis_MC2_155 KG-------LAPYGAEEAQAAAPVVPASSFAAAFDG--LRLGARSRAFWL TH_0390|M.thermoresistible__bu R-----------------AAPATMGTVREIAASLKTVWLRAGTRLGFFTH MAV_3974|M.avium_104 A-----------------APPPPTRSTVTMREALR---------VRAYQS MMAR_1879|M.marinum_M AAGWSPWIWAMIAVGVGFVTVFVYWQSVNTSEPLIPLRIFGDRNFALCSF MLBr_00556|M.leprae_Br4923 PDSKQVLPSYGVPVLVGGIVATVAFAVWERCARTR-LIDPAGVHIRPFLS MUL_3826|M.ulcerans_Agy99 GGSVYAWGSAPIIGLFTAAGVTLAVFVWVETIAAQPILPIRLFAAPVFSV MAB_4839c|M.abscessus_ATCC_199 AFALASCASYA------VIVNLVPLMNQRGLDGTVAATALALGGVGQVIG Mvan_3219|M.vanbaalenii_PYR-1 AFAMAGLASYA------VIVNLVPLMTAHGISTQAAALALGLGGAGQVLG Mb1766c|M.bovis_AF2122/97 AIVFGGFVAFSNYL--PTYITTIYGFSTVDAGARTAGFALAAVLARPVGG Rv1737c|M.tuberculosis_H37Rv AIVFGGFVAFSNYL--PTYITTIYGFSTVDAGARTAGFALAAVLARPVGG Mflv_1096|M.gilvum_PYR-GCK LLVAAGLFAFTTLG---IVVHLVPILRDAGAEPLAAAGTAALVGIFSIVG MSMEG_5194|M.smegmatis_MC2_155 LAASFAICGMTTNG--LIATHFIPAANDHGMPTTVAAGLLATIGILDVAG TH_0390|M.thermoresistible__bu MGTQFSVTVFALMWG-VPYLTVGQGLSTQMAGAMLTLSVAVAIVAGVLIG MAV_3974|M.avium_104 ALLSNFATGWSAFGL-RMALVPLFVSDVMGRGIGTIGVVLAAFAGGNALA MMAR_1879|M.marinum_M GVAVIAFVAAAMMLPGVFYMQTVRGLSPTRTALLMAPLPIVVGLLTPFIG MLBr_00556|M.leprae_Br4923 ALGASVAAGAALMVT--LVNVELFGQGVLGMDQTQAAGLLVWFLIALPIG MUL_3826|M.ulcerans_Agy99 CCVLAFVVGFAMLG--ALIFVPTFMQYVNGVSATASGLRILPMVIGMLIT : MAB_4839c|M.abscessus_ATCC_199 RFGYPALAQCIS-VVPRTLLIMGVVAATTAL-----------LGVFA--S Mvan_3219|M.vanbaalenii_PYR-1 RLGYQRMVRHLS-VVPRTALIMAGVAVTTAL-----------LGLLT--S Mb1766c|M.bovis_AF2122/97 WLSDRIAPRHVV-LASLAGTALLAFAAALQP-----------PPEVW--S Rv1737c|M.tuberculosis_H37Rv WLSDRIAPRHVV-LASLAGTALLAFAAALQP-----------PPEVW--S Mflv_1096|M.gilvum_PYR-GCK RLGVGLLLDRFPGRVVGACAYLVPILGCAAL-----------LIDGS--S MSMEG_5194|M.smegmatis_MC2_155 TVFSGWLTDRVDPRVLLLVYYAGRGVSLLLL-----------PSLLSPQA TH_0390|M.thermoresistible__bu IFTGRHPHRRSRLVLAIIASNAAAWTAVLAL-----------PDRAPLWL MAV_3974|M.avium_104 VVPSGYLSDRMGRRTLLIVGLVTSGAATVWL-----------GFVAS--- MMAR_1879|M.marinum_M KILDRAHPRAVAGFGFSVVAISLIWFSIEMA-----------PATPVWRL MLBr_00556|M.leprae_Br4923 AVLGGWGATKAGDRTMTFVGLLITAGGYWLISHWPVDLLNYRRSIFGLFS MUL_3826|M.ulcerans_Agy99 SIGSGSMVGRTGRYKIFPVLGTALMTLAFLLMSR------TDESTSAAVQ . MAB_4839c|M.abscessus_ATCC_199 AVSLIAVAVAAGMARGIMTLLQATA-----ITERWGSTHYGHLSGLLTAP Mvan_3219|M.vanbaalenii_PYR-1 VATLITVAVVAGVVRGVMTLLQATA-----VTERWGITHYGQLSGILSAP Mb1766c|M.bovis_AF2122/97 AATFITLAVCLGVGTGGVFAWVAR---------RAPAASVGSVTGIVAAA Rv1737c|M.tuberculosis_H37Rv AATFITLAVCLGVGTGGVFAWVAR---------RAPAASVGSVTGIVAAA Mflv_1096|M.gilvum_PYR-GCK PLSQTVAAALFGLTLGAEVDVIAYL-----ASRYFGLRNFGGLFGGLVAA MSMEG_5194|M.smegmatis_MC2_155 EPSTWVFVVFYGLDWVATVPPTIVL-----CRDFFGTRSP-VVFGWVFAS TH_0390|M.thermoresistible__bu LITLIVVISVGGPGSMVGFDFARTFNPSATLGTAQGMVNMGGFLASLLVM MAV_3974|M.avium_104 LPVFLVAAGVVGVVTGIYMSPLQAA----VADILGNEARAGLPVATVQMM MMAR_1879|M.marinum_M AVPIAFLGVGMVFAWPVLTVTATRDLPAELVGASSGVYNAARALGATLGS MLBr_00556|M.leprae_Br4923 VPTMYADLLVAGLGLGLVIGPLSSATLRVVPTAQHGIASAAVVVARMTGM MUL_3826|M.ulcerans_Agy99 SVYLLILGSAIGMSSQVLVIIVQNTSEFEDLGVATSGVSLFRTIGGSFGA . MAB_4839c|M.abscessus_ATCC_199 IMLTTALAPFTG-AALAQLLHGYPAMFVALGVAGIIGAAAATATNPSQ-- Mvan_3219|M.vanbaalenii_PYR-1 VMLSTALGPFVG-AGLATLLGGYGAMFVVLGAVALAAALLATATRVRPVD Mb1766c|M.bovis_AF2122/97 GGLGGYFPPLVMGATYDPVDNDYTVGLLLLVATALVACTYTALHAREPVS Rv1737c|M.tuberculosis_H37Rv GGLGGYFPPLVMGATYDPVDNDYTVGLLLLVATALVACTYTALHAREPVS Mflv_1096|M.gilvum_PYR-GCK LSLGTAFGPLAAGATSDHFGGYTNFLILTMVLMGLSSMALASLKPPPVWT MSMEG_5194|M.smegmatis_MC2_155 HQVGAAIAAAGAGWLRDLNGNYDMAFYLAAGLCFIAAVFSASIGKSQVSS TH_0390|M.thermoresistible__bu QAMGQILDAAGG-YSFDSFRLAWTVQYVVWVVAAVGILITRKKARRQMAL MAV_3974|M.avium_104 SDLGAIVGSMAVGWAAEQIGYGWGFFISGVVLLIAAVGWVMAPETRTATE MMAR_1879|M.marinum_M AGMAALMTSRIAAQAPAIHDDAHTSAAAATEGVALQLPEFAREPFSASMS MLBr_00556|M.leprae_Br4923 LIGVAALTAWGLYRFNQILAGLSTAVPPDATLIERAAAVADQAKRAYTMM MUL_3826|M.ulcerans_Agy99 AIFGSLFVNFLNSRLASALT-ATEVASSPEALHRQSPAVAAPIVHAYAGS . MAB_4839c|M.abscessus_ATCC_199 -------------------------------------------------- Mvan_3219|M.vanbaalenii_PYR-1 ADG----------------------------------------------- Mb1766c|M.bovis_AF2122/97 EEASR--------------------------------------------- Rv1737c|M.tuberculosis_H37Rv EEASR--------------------------------------------- Mflv_1096|M.gilvum_PYR-GCK VTSPGEDARADRFPQP---------------------------------- MSMEG_5194|M.smegmatis_MC2_155 EEADSVETSALP-------------------------------------- TH_0390|M.thermoresistible__bu EQERMLLESFEPGPRRHTGPDRTNRPHG---------------------- MAV_3974|M.avium_104 LEADLMAASRTSSRCEQQL------------------------------- MMAR_1879|M.marinum_M QSLLLPALIALLGVGAALFMSDLRAPRSTLAQGL---------------- MLBr_00556|M.leprae_Br4923 YSDIFMITAIVCVIGALLGLLISSRKEHASEPKVPE-------------- MUL_3826|M.ulcerans_Agy99 LAQVFLCAAPVAAIGFVLALFMREVPLRDIHNRDHDARVPSGDGSGQQNK MAB_4839c|M.abscessus_ATCC_199 ------------------------------ Mvan_3219|M.vanbaalenii_PYR-1 ------------------------------ Mb1766c|M.bovis_AF2122/97 ------------------------------ Rv1737c|M.tuberculosis_H37Rv ------------------------------ Mflv_1096|M.gilvum_PYR-GCK ------------------------------ MSMEG_5194|M.smegmatis_MC2_155 ------------------------------ TH_0390|M.thermoresistible__bu ------------------------------ MAV_3974|M.avium_104 ------------------------------ MMAR_1879|M.marinum_M ------------------------------ MLBr_00556|M.leprae_Br4923 ------------------------------ MUL_3826|M.ulcerans_Agy99 LEGDLDTGQSVGAPGKEPDFGVDPAMGPVR