For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSDLRVAVLGVGVMGADHVERLSTRIAGVKVAVVNDFIETRAEEIAAGVPGCRVVSDPLEAIADPDVDAV VLATPGPTHDKQLLACLEQRKPVLCEKPLTTDVDSALDVVRREAELGVRLIQVGFMRRFDPEYAELKTLI DAGEFGQPLVLHCVHRNAAVPPSFDSTMIVKDSLVHEVDVTRFLFDEEIASVHILRPTPNPGAPEGIQDP QIAIMKTPSGKHVDVELFVTTGVGYEVRTELVAEKGTAMIGLDVGLIRKGVPGTWGGAIAPDFRVRFGTA YDIEFQRWVAAVRHGIATGSDDYTDGPTAWDGYAAAAVCAAGVESLAGGQPVEVKMVERASINGA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4666 | - | - | 100% (345) | myo-inositol 2-dehydrogenase |
M. smegmatis MC2 155 | MSMEG_4650 | - | 2e-21 | 28.57% (343) | oxidoreductase YisS |
M. smegmatis MC2 155 | MSMEG_6717 | - | 6e-14 | 28.27% (191) | oxidoreductase, Gfo/Idh/MocA family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2598 | - | 1e-137 | 68.33% (341) | inositol 2-dehydrogenase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2306c | - | 5e-11 | 31.25% (144) | putative oxidoreductase |
M. marinum M | MMAR_2628 | - | 1e-09 | 30.34% (145) | hypothetical protein MMAR_2628 |
M. avium 104 | MAV_1941 | - | 2e-11 | 27.38% (263) | oxidoreductase family protein, NAD-binding Rossmann fold |
M. thermoresistible (build 8) | TH_3104 | - | 5e-07 | 28.10% (153) | PUTATIVE oxidoreductase domain protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0387 | - | 1e-146 | 73.04% (345) | inositol 2-dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4666|M.smegmatis_MC2_155 ----MSDLRVAVLGVGVMGADHVERLSTRIAGVKVAVVNDFIETRAEEIA Mvan_0387|M.vanbaalenii_PYR-1 ----MSEIGVAVLGVGLMGADHVARIASRISGARVAVVNDQVTEKAERLA Mflv_2598|M.gilvum_PYR-GCK ----MTDLRIAVLGVGVMGADHVARITSRISGARVAVVNDHLVEKAEQLA MAV_1941|M.avium_104 -----MTLRVGIIGVGWGAHVQVPGFR-AAKGYEPVALCARTPERLERVA TH_3104|M.thermoresistible__bu -------MRVLVIGTGFGRQAMAPVYR--GLGFDVEVVSPRDESALHRAL MAB_2306c|M.abscessus_ATCC_199 ---MPESIRWGIVGPGRIAGNVARDFP-LTPRAELAAVASRSLPRAQDFA MMAR_2628|M.marinum_M MTGHGSPLRIGILGAARIAPQALVKPAQGNVEAVVAAVAARDGARAQAFA : ::* . .: . MSMEG_4666|M.smegmatis_MC2_155 AGVPGCRVVSDPLEAIADPDVDAVVLATPGPTHDKQLLACLEQRKPVLCE Mvan_0387|M.vanbaalenii_PYR-1 ATITGCRAIADPLDAIADRDVDAVVLATPGPTHEKQLLACLEHRKPVLCE Mflv_2598|M.gilvum_PYR-GCK ASIPGCSAVADPLDAIADADVDAVVLATPGGTHEEQLLACLDQRKPVMCE MAV_1941|M.avium_104 DKLGIEETSTDWESFVTRDDLDVISVATPTVLHRDMTLAALAAGKPVLCE TH_3104|M.thermoresistible__bu N-----------------AGVDLVSVHSPPFLHRQHVTAAVDRGYPVLCD MAB_2306c|M.abscessus_ATCC_199 GAHQIPRAYGSYRELLADPDIDAVYIATPHPQHRQTAIAALTAGKAILVE MMAR_2628|M.marinum_M AKHGISRVHSSYEALIADPTLDAVYIPLPNGLHGRWTQAALTAGKHVLCE :* : : * * *.: :: : MSMEG_4666|M.smegmatis_MC2_155 KPLTTDVDSALDVVRREAELGVRLIQVGFMRRFDPEYAELKTLIDAGEFG Mvan_0387|M.vanbaalenii_PYR-1 KPLTTDVETSLEVVRREAELGVRLIQVGFMRRFDDEYRALKALIDGGELG Mflv_2598|M.gilvum_PYR-GCK KPLTTDVSTSLEIARREADLGRPLIQVGFMRRFDDEYVRLKALLDGGELG MAV_1941|M.avium_104 KPLAGDLDAARDMVRAAAEANVPTACC-FENRWNPDWLAVADRVRSGFLG TH_3104|M.thermoresistible__bu KPFGRNADEARAMRDHAARRAVPTFLN-FELRHQPARAEFKKLADSGVIG MAB_2306c|M.abscessus_ATCC_199 KTFTATVSGAQEVIDIARARGVFAMEA-MWTRFQPAIVAAKDLVDDGAIG MMAR_2628|M.marinum_M KPFTANAAEADEIAQLAATTDRVVMEA-FHYRYHPLTLRIEQILASGELG *.: : : : * . * :* MSMEG_4666|M.smegmatis_MC2_155 QPLVLHCVHRN----AAVPPSFDSTMIVKDS-------LVHEVDVTRFLF Mvan_0387|M.vanbaalenii_PYR-1 NPLVLHCVHRN----PVVPGHFDSAMTVRDS-------LVHEVDVTRFLF Mflv_2598|M.gilvum_PYR-GCK NPLMMHCVHRN----PGVPAYFDSSLIVKDS-------LVHEVDITRYLF MAV_1941|M.avium_104 TQYLARVSRSASYWHPSHPLQAHWMYDREQGGGYLAGMLVHDLDFLCSLL TH_3104|M.thermoresistible__bu TPRHLSWTFFG---AGLRGRPHGWINERDTGGGWIGANGAHLIDYTRYLF MAB_2306c|M.abscessus_ATCC_199 EVRQVQADLGV----DRPFDREDRLFNPALGGGALLDLGVYVVSLAQYFL MMAR_2628|M.marinum_M TLQRVETSMCFP-----LPKFSDIRYNYALAGGATMDAGCYAVHMARTFG . : : : MSMEG_4666|M.smegmatis_MC2_155 DEEIASVH-ILRP-TPNPGAPEG------IQDPQIAIMKTPSGKHVDVEL Mvan_0387|M.vanbaalenii_PYR-1 DEEIVSIQ-IVKP-TPNSLAREG------LFDPQIAILRTASGRHVDVEL Mflv_2598|M.gilvum_PYR-GCK GEEIASVQ-IIKP-TSNPGAPNG------VVDPQIAILRTVSGRHVDVEL MAV_1941|M.avium_104 GRPVSVCA-EVRTSDPVRELPDGGTLHVTADDTAAVLMRMESGVTAVLSV TH_3104|M.thermoresistible__bu GSEITGCGGVARIEDPHRPDPQGRPRRATAEDAYSAWFVTENGCTATHDT MAB_2306c|M.abscessus_ATCC_199 GDPAAVVA-------HGSLFPTG------VDAEAGLLLRYDDGRTATLLC MMAR_2628|M.marinum_M GGTPEVVS------AQAKRRDSE------VDRAMTAELRFPAGHSGRIQC . : * MSMEG_4666|M.smegmatis_MC2_155 FVTTGVGYEVRTELVAEKGTAMIGLDVGLIRKGVPGTWGGAIAPDFRVRF Mvan_0387|M.vanbaalenii_PYR-1 FVTTGVAYEVRTELVAEKGSVIIGLDVGLVRKSAPGTWGGTITPSFKERF Mflv_2598|M.gilvum_PYR-GCK FVTTGVAYEVRTEVVGEHGSAIIGLDVGLIRKKGPGSWGGTLTPGFRERF MAV_1941|M.avium_104 SVMGAHADHYRLELFGSDGTIIGDGDLRSAAYSLGAATDDGLRSLAVDER TH_3104|M.thermoresistible__bu AFAAAVALPPRMVLTGSAGALELIGDSRLIVHRADADPMTHEFPPAPPR- MAB_2306c|M.abscessus_ATCC_199 SLLHHTPGQAR--IFGTEGWIDILPRFHHPREIVLHRKGAAPEPMVRPPV MMAR_2628|M.marinum_M SMWSSHLLNMSARVVGDRGELRVLNPVVPQLFHRLTVQSAIGRRVERFPR . : . * MSMEG_4666|M.smegmatis_MC2_155 GTAYDIEFQRWVAAVRHGIATGSDDYTDGPTAWDGYAAAAVCAAGVESLA Mvan_0387|M.vanbaalenii_PYR-1 GQAYDTEIQRWVDAVRSGGTTG--IYTDGPTAWDGYAATAVCEAGVQALQ Mflv_2598|M.gilvum_PYR-GCK GPAYDTEIQRWVDAVHSG------TNVCGPTAWDGYAAAAVCAAGVESLE MAV_1941|M.avium_104 EPAHPDRLPRGLAGHASR--------AMALMLQDWLPAFDGAPSNVATFE TH_3104|M.thermoresistible__bu -SFYEPALTPWLEQVADA-------------LRTGRPATPSFDDGVAVAE MAB_2306c|M.abscessus_ATCC_199 GGGYSHELAEVTECLLNG-----------RAQSSVMPLADTLAVQRVLNT MMAR_2628|M.marinum_M RASYAYQLDAFTGAILRG--------------EAVKTTPQDAVQNMTVID : : . MSMEG_4666|M.smegmatis_MC2_155 GGQPVEVKMVERASINGA---------- Mvan_0387|M.vanbaalenii_PYR-1 SGQPVAVSMVDRVSIPGA---------- Mflv_2598|M.gilvum_PYR-GCK TGLPVDVQLADEVTSPSPQGVRESDGCR MAV_1941|M.avium_104 DG-LLSLAIIDAARRSAEGGGWEPVQA- TH_3104|M.thermoresistible__bu VMDRLRANVIEQVMQ------------- MAB_2306c|M.abscessus_ATCC_199 ACEQLGVDHTEDPADLD----------- MMAR_2628|M.marinum_M AIYRAAGLPLRNPS--------------