For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTALDDLIRIAADEGFDPARRWPVAADFGVAHILSDLARQAAHRDAMRESPADDVRRLQQAGVPALRLPT ELGGRGIPLTQLFAFAAELADADPSVAHALRNHFWFVEQALRSAPDSPRRAYLARVADGDLIGGSFGELH TSKAGNTEVTLRQALRSSSWDSR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4593 | - | - | 100% (163) | acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5001 | - | 1e-21 | 41.23% (114) | pesticide degrading monooxygenase |
M. smegmatis MC2 155 | MSMEG_4084 | - | 5e-18 | 37.98% (129) | putative acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1422c | - | 2e-23 | 39.04% (146) | putative acyl-CoA dehydrogenase |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3422 | - | 8e-11 | 35.90% (117) | acyl-CoA dehydrogenase domain-containing protein |
M. thermoresistible (build 8) | TH_3721 | - | 2e-15 | 36.03% (136) | PUTATIVE putative acyl-CoA dehydrogenase family protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0356 | - | 2e-06 | 29.89% (87) | acyl-CoA dehydrogenase type 2 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_1422c|M.abscessus_ATCC_199 ---------MTSAPSVLEIRALPGTDTYRNLLAQVAEGARDR-----DLD MAV_3422|M.avium_104 ---------MPVAFHRQDT--PAGAAAVQPVLAEIAADYRLR-----LAD TH_3721|M.thermoresistible__bu ------------VPYFDEQRFEALAAEFRPVFDRIRAGAVQR-----ERD MSMEG_4593|M.smegmatis_MC2_155 MTALDDLIRIAADEGFDPARRWPVAADFGVAHILSDLARQAA-----HRD Mvan_0356|M.vanbaalenii_PYR-1 -MTGSIGTNRSTIKGVTMLEQDLTDEDFAPYFVKAQEVSQFFREIGPKYD * MAB_1422c|M.abscessus_ATCC_199 --DENPFDQVRLLKEAGFGRLRIPTELGGAGLSVRQLFSAIIDVAQADPI MAV_3422|M.avium_104 GGTEPPLRGLKLVRDHRLGALRLARELGGAGYTAPEFFDYLVALAAADPD TH_3721|M.thermoresistible__bu --RELPFEQIGWLKAAGFGAVRLPVSAGGRGATIPELTRLLIELSTADSN MSMEG_4593|M.smegmatis_MC2_155 AMRESPADDVRRLQQAGVPALRLPTELGGRGIPLTQLFAFAAELADADPS Mvan_0356|M.vanbaalenii_PYR-1 QENTFAYPSIEVFKKSGLGALPVPKAFGGPGGNILQVSKVVSELSKGDSA . : .: . : :. ** * :. :: .*. MAB_1422c|M.abscessus_ATCC_199 VAHIFRTHFWFVEERLRTLADPVSAAWLTKVNEGNLFANAFSEKGSLAVG MAV_3422|M.avium_104 LAHILRIHYALVEELQVTPRRPGSDRWIAVVAEGGLIGGANAEQSQKSVG TH_3721|M.thermoresistible__bu ITQALRGHFAFAEDRLVAAPGPGRDRWWQRFAAGDLAGNAWTEIGDVVLG MSMEG_4593|M.smegmatis_MC2_155 VAHALRNHFWFVEQALRSAPDSPRRAYLARVADGDLIGGSFGELHTSKAG Mvan_0356|M.vanbaalenii_PYR-1 ITLAYNMHYIMVGIAGNLMSEEQNKYWLGRVADGELMFGPFSEQRAGFSG :: . *: :. : . * * .. * * MAB_1422c|M.abscessus_ATCC_199 SLVFNTRLLPVGDAYRLNGEKFYSTGTLFADYLTVTAT-TDRDSVASVIV MAV_3422|M.avium_104 GNHRDTRLVTTPDGLRLRGRKFYSTGAQFSDYLRITAQ-DDDGAPTAVVI TH_3721|M.thermoresistible__bu EANTKVAPSGDPGTFVVNGQKFYSTGSIFADWIDLYAQRTDTGEFVIAAV MSMEG_4593|M.smegmatis_MC2_155 NTEVTLRQALRSSSWDSR-------------------------------- Mvan_0356|M.vanbaalenii_PYR-1 LADMQAVPQ-KDGGWKLYGKKTWGTLCEAADIITTNATETDADGNLPDTF . MAB_1422c|M.abscessus_ATCC_199 P------------------GDRDGVRLVDDWDGFGQRRTGTGTTIFSQVD MAV_3422|M.avium_104 P------------------VDRAGVEHLDDWDGIGQRQTGSGTTVFNDVA TH_3721|M.thermoresistible__bu D------------------AHADGVTHADDWDGFGQRTTGSGTSTYRDVR MSMEG_4593|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0356|M.vanbaalenii_PYR-1 DGRVAAEKLFIGDFKVDENGVGDGIRIEKTWDALGMHATGTQTIVFDGYF MAB_1422c|M.abscessus_ATCC_199 VAADEILSETPYDAAPVPTTQYASLQLYILAIVAGVLRAVVDDGEALLRS MAV_3422|M.avium_104 VADDEVFPLG--STIGVNRARGALVQLYLHAVAAGILRSLTEDAAALVRG TH_3721|M.thermoresistible__bu VPAENLIPFAT-----RFRYQTAFYQLFHLATLAGIAHAATAELAQRVRG MSMEG_4593|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0356|M.vanbaalenii_PYR-1 VPEDGFVSVWRAGAFGVLEWASLMFASIYLGMQQRILEESVKSLSKKHLG MAB_1422c|M.abscessus_ATCC_199 RQRNFSHALTERPVDDPLLQRTLGELSATAFAAEATVLAAADAIEAATAT MAV_3422|M.avium_104 RRRTYTFASADTPTADPQLLQIVGEIDAVAYTAHALVRNAAAELAPALQA TH_3721|M.thermoresistible__bu RTRTFSHGNAPRYAADPQIQQVVGEVMAAAFAAEAIALRAAEDXXXRRRS MSMEG_4593|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0356|M.vanbaalenii_PYR-1 ATFGAIVAADTEVKSVGHIIDGIGDMASRVECSRRVLYQTCQDLLDGKDK MAB_1422c|M.abscessus_ATCC_199 LRDGVPDAQLAQEAQVAVAKAKVHIDAVALDAATKLLDLGGASAASRTRN MAV_3422|M.avium_104 ARDTGIDPELEAAASIAAARVKVAIQEPALRAASRVFDAGGASAVQASAL TH_3721|M.thermoresistible__bu SAAPPRRRTRPRSCWDATRSSSVCVPRSRPPRCTSPWAPRPMSG------ MSMEG_4593|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0356|M.vanbaalenii_PYR-1 LWAPELRFPYLGLAKTFIAGNVMHMSRQAMSMVGGQSFRRGGIFERLYR- MAB_1422c|M.abscessus_ATCC_199 LDRHWRNIRTISLHNPVHYKARVIGQNLLHGTPLPANAYF MAV_3422|M.avium_104 LDRHWRNLRTLFSHNPTVYKARVLGDVVVNGAALPDTSFF TH_3721|M.thermoresistible__bu ---------------------------------------- MSMEG_4593|M.smegmatis_MC2_155 ---------------------------------------- Mvan_0356|M.vanbaalenii_PYR-1 -----DSAASMFQPLNGDQTRTYIGQFLLESAAAQNGASS