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TTTSAPLKPPESGPTNTSRPRGRVLGGPSLRQLAQLGPVVALVLLAAVFAVSAPNFTSSANLTNVLQQVS ITAIAAVGATVVILVAGIDLSVGSVVALTGSIAALYLQHAILSTGASAAVAVLLSLVVGTACGFLNGVLI TFCRVPAFIATLATLTALRGIALLVTNSYPISINNSAFTQIGIGKVGAVPIPVIIMAVTFAVGYVILHRL KIGRRIYAVGGNREAARLSGIRVSRVLLFAFTFAGLCAGVASVILTAKLSSGQPAGAVGFELDVIAAVVV GGTSLFGGRGRLAGTFLGALVIAVLGNGLTLMNVPFYWQQIVTGAVVVVAVVLDRVTRGGESGE*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4171 | - | - | 100% (345) | ribose transport system permease protein RbsC |
| M. smegmatis MC2 155 | MSMEG_3090 | - | 4e-60 | 38.60% (329) | ribose transport system permease protein RbsC |
| M. smegmatis MC2 155 | MSMEG_3601 | - | 1e-59 | 38.10% (336) | ribose/xylose/arabinose/galactoside ABC-type transport systems, |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2606 | - | 2e-33 | 29.28% (321) | inner-membrane translocator |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | MLBr_00397 | - | 1e-53 | 39.13% (299) | putative transporter protein |
| M. abscessus ATCC 19977 | MAB_2624c | - | 3e-06 | 25.48% (314) | high-affinity branched-chain amino acid ABC transporter (LivM) |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_1539 | - | 2e-05 | 24.92% (301) | major facilitator family protein transporter |
| M. thermoresistible (build 8) | TH_1081 | - | 6e-11 | 26.79% (168) | ABC transporter branched chain amino acid transport permease |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5291 | - | 2e-33 | 29.50% (400) | inner-membrane translocator |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_4171|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_00397|M.leprae_Br4923 MDHTTKCDAEQYFQAIVTSMADGVIVVDIDGRIESINPAATRILGLRAHD
Mflv_2606|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_1081|M.thermoresistible__bu --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_1539|M.avium_104 --------------------------------------------------
MSMEG_4171|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_00397|M.leprae_Br4923 VVDMKHGHPFCFYDTDNQRVDLEREVMRVVRREVTTVSKVVGIDQHSGQR
Mflv_2606|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_1081|M.thermoresistible__bu --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_1539|M.avium_104 --------------------------------------------------
MSMEG_4171|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_00397|M.leprae_Br4923 LWLSVNVSLLAYKAPPHSALVVSFSDISAHHLSIERLTYEATHDCLTGLA
Mflv_2606|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_1081|M.thermoresistible__bu --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_1539|M.avium_104 --------------------------------------------------
MSMEG_4171|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_00397|M.leprae_Br4923 NRRFAEDQITKSLQHDERSRLAAVLLLDLDDFKVINDSLGHDVGDAVLQT
Mflv_2606|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_1081|M.thermoresistible__bu --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_1539|M.avium_104 --------------------------------------------------
MSMEG_4171|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_00397|M.leprae_Br4923 VAQRLRSAVRPDDVVARLGGDEFIVLLRGPLSDMNANDVAKRLHTTLSES
Mflv_2606|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_1081|M.thermoresistible__bu --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_1539|M.avium_104 --------------------------------------------MVMPNG
MSMEG_4171|M.smegmatis_MC2_155 ------MTTTSAPLKPPESGPTNTSRPRGRVLGGPSLRQLA---------
MLBr_00397|M.leprae_Br4923 LVVDQLTVPIGASVGILEVRPDDRRRAADILRDADSAMYAAKNKKQCAVT
Mflv_2606|M.gilvum_PYR-GCK -----MSTKEALDVGGHKVVRDERVKERNRLQRLLIRPEMG---------
Mvan_5291|M.vanbaalenii_PYR-1 ----MTTVRSDSDVSLADADFSGDTRADETFGAAVRGYLQRVRGGDMG--
TH_1081|M.thermoresistible__bu --------MTHQCVALYTCHAADITFNLQGLREGLLQLTIDG--------
MAB_2624c|M.abscessus_ATCC_199 ----MSAARALAPGDSIRRWWSELARPVQWVYGVVGFALLALLPVWKIPY
MAV_1539|M.avium_104 PVAHQAGTRGYRRMTAALCGAGLASFAAMYCTQALLPALSAHHRIG----
MSMEG_4171|M.smegmatis_MC2_155 --QLGPVVALVLLAAVFAVSA-PNFTSSANLTNVLQQ--VSITAIAAVGA
MLBr_00397|M.leprae_Br4923 PQQLVPFVALIALFVFFTAAAGAKFYAPSNLLVILQQ--TVVLAIVGYGM
Mflv_2606|M.gilvum_PYR-GCK -----AGIGAIGIFVFFLVVA-PPFREASSLATVLYA--SSTIGIMACGV
Mvan_5291|M.vanbaalenii_PYR-1 --SLPAVLGLVVLFVVFGLAN-DRFLSALNLANLITQ--AGSICVLAMGL
TH_1081|M.thermoresistible__bu -LSWGAIYALVAVGYTLVYGVLKLINFAHAEVFMLGM--FGSYFCLDVIL
MAB_2624c|M.abscessus_ATCC_199 LDTPNTSFGGVMAQFAMVALIAIGLNVVVGQAGLLDLGYVGFYAIGAYTV
MAV_1539|M.avium_104 PATAALTVSLTTGALALSIIPASVLSERYGRTRVMLIS-GVASSVIGLLL
. : : ::
MSMEG_4171|M.smegmatis_MC2_155 TVVILVAGIDLSVGSVVALTGSIAALYLQHAILSTGASAAVAVLLSLVVG
MLBr_00397|M.leprae_Br4923 TFVIMAGSVDLSVGSIVALTG-------VTAALVAAQNQFAAIVTALLVG
Mflv_2606|M.gilvum_PYR-GCK AVLMIGGEFDLSAGVAVTFSS----LAASMLAYNLHLNLWVGALLALVLA
Mvan_5291|M.vanbaalenii_PYR-1 VFVLLLGDIDLSAGVAGGVSA----CAMALIVVNLSWPWWAALLVGIACG
TH_1081|M.thermoresistible__bu GFTPRGNAYDLGIGLTVLYLG---IAMLFAIAVSGTAAAGLEFIAYRPLR
MAB_2624c|M.abscessus_ATCC_199 ALLTSPDSPWNRMGTSAFFSS--DWAWLSCLPIAVAITACFGLILGTPTL
MAV_1539|M.avium_104 PFSPSLGVLVFGRAVQGVALAGIPAVAMALLAEEVDASSLGSAMGRYIAG
. . . :
MSMEG_4171|M.smegmatis_MC2_155 TACG-----FLNGVLITFCR--VPAFIATLATLTALRGIALLVTN-----
MLBr_00397|M.leprae_Br4923 LAAG-----MVNGIVFAYGK--IPSFVSTLGMLQVCRGITLMISD-----
Mflv_2606|M.gilvum_PYR-GCK LTVG-----FFNGFLVMKTK--IPSFLITLSTFFMLAGINLAVTK-----
Mvan_5291|M.vanbaalenii_PYR-1 ALIG-----LAIGLLRAKLG--IPSFVVTLAFFLGLQGVTLKLIGEGGSV
TH_1081|M.thermoresistible__bu RRNA-----ARLSFLITAIG--MSFVLQEFVHFILPKILDGYGGSN----
MAB_2624c|M.abscessus_ATCC_199 RLRG-----DYLAIVTLGFGEIIRLLADNLDVTNGPRGLHKVAYP-----
MAV_1539|M.avium_104 TTIGGLAGRIVPSVVVQVGTWRVALLACSLITLAGTAVFAVLVPRS----
. ..: : . : .
MSMEG_4171|M.smegmatis_MC2_155 --------------------------------------------------
MLBr_00397|M.leprae_Br4923 --------------------------------------------------
Mflv_2606|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5291|M.vanbaalenii_PYR-1 RVDDPVIRGLTISNLPVAAGWAIAGVVVLGFAGLELHQHRRKIALRLSHS
TH_1081|M.thermoresistible__bu --------------------------------------------------
MAB_2624c|M.abscessus_ATCC_199 --------------------------------------------------
MAV_1539|M.avium_104 --------------------------------------------------
MSMEG_4171|M.smegmatis_MC2_155 ---SYPISINNSAFTQIGIGKVG----------------AVPIPVIIMAV
MLBr_00397|M.leprae_Br4923 ---SSAKPMP----FHGILGAMG----------------AMPWILIVCLF
Mflv_2606|M.gilvum_PYR-GCK ---LVAGQVATQSVSDMQGWDSAQKVFASSFTL---FGVGIRITVVWWLV
Mvan_5291|M.vanbaalenii_PYR-1 PLGVVVARVGAVAAVVLGVTYVMSVNRSVSAVA---DIRGIPYVLPLMLV
TH_1081|M.thermoresistible__bu -AQQPIRLVTPETQFTLGDVRVSN---------------VTLIIVFAALV
MAB_2624c|M.abscessus_ATCC_199 --HVGEQHVHGGGVFSSANSGGHLN-----------YGVWWYWLGLCLIA
MAV_1539|M.avium_104 -RFFTPKPASVRAALRNLAGHLRNPVLAKLFAVGFVLMGGFVTVYNYLGY
MSMEG_4171|M.smegmatis_MC2_155 TFAVGYVILHRLKIGRRIYAVGGNREAARLSGIRVSRVLLFAFTFAGLCA
MLBr_00397|M.leprae_Br4923 VTILAGILFQFTMFGRWVKAIGGNERVATLAGVPTRGIKVAIFAICGLTA
Mflv_2606|M.gilvum_PYR-GCK FTAVATWVLFKTKVGNWIFAVGGDADSARAVGVPVTKVKIGLFMFVGFCA
Mvan_5291|M.vanbaalenii_PYR-1 LLIAMTVVLRRTSYGRHIYAVGGNAEAARRAGISVDRIRVSVFVVCSSLA
TH_1081|M.thermoresistible__bu LALITDVVINRTRLGRGIRAVAQDPDTATLMGVSRERVILTTFVIGGLLA
MAB_2624c|M.abscessus_ATCC_199 AVLVLMGNLERSRVGRSWVAIREDEDAAEMMGVPTFRFKLWAFVIGASIG
MAV_1539|M.avium_104 RLAARPFGLAPSVVGLLFLLYLVGTGTSVVAGRLADRRGRPLVLGAALPI
: * . : * . .
MSMEG_4171|M.smegmatis_MC2_155 GVASVILTAKLSSGQPAGAVG-FELDVIAAVVVGGTSLFGGRGRLAGTFL
MLBr_00397|M.leprae_Br4923 GLGGIVLASRLGAGTPTAATG-FEIDVIAAVVIGGTPLTGGLGRLSGTLI
Mflv_2606|M.gilvum_PYR-GCK WFVGMHLLFAFNTVQSGQGIG-NEFFYIIAAVIGGCLLTGGYGTAIGAAI
Mvan_5291|M.vanbaalenii_PYR-1 ALSGIIAASYAGKVSASSGAGNTLLYAVGAAVIGGTSLFGGKGRAIDAVI
TH_1081|M.thermoresistible__bu GAAALLYTLKMPQAIIYSGGFLLGIKAFTAAVLG------GIGNLRGALL
MAB_2624c|M.abscessus_ATCC_199 GLSGALYAGQVQYVASPTFNIINSMLFLCAVVLG------GQGNKLGVVV
MAV_1539|M.avium_104 AVAGLLLTVPPSLAAIVAGVGVFTGGFFAAHTVASGWVGAVAQRDRAEAS
. . * .:.
MSMEG_4171|M.smegmatis_MC2_155 GALVIAVLGNGLTLMNVP------FYWQQIVTGAVVVVAVVLDRVTRGGE
MLBr_00397|M.leprae_Br4923 GAIIISMLSNGMVFMGVG------NAASQIIKGIMLAAAVFVFLQRRKIG
Mflv_2606|M.gilvum_PYR-GCK GALIFGMTNQGIVYAGWD------PDWFKFFLGAMLLFAVIANNAFRSYA
Mvan_5291|M.vanbaalenii_PYR-1 GGVVVATIANGLGLLNQS------SYINFLVTGGVLLLAASVDAISRRRR
TH_1081|M.thermoresistible__bu GGLLLGVMEN-YGQAVFG------TQWRDVVAFVLLVLVLFFRPTGILGE
MAB_2624c|M.abscessus_ATCC_199 GAFIIVYLPNRLLGVQVQGIDL--GNLKYLFFGLALVVLMLFRPQGLFPA
MAV_1539|M.avium_104 ALYLFSYYLGGSVAGAFGGVLYGVGGWSATVCFVVVLLMAGAALVALLVR
. :. . :
MSMEG_4171|M.smegmatis_MC2_155 SGE------------------------
MLBr_00397|M.leprae_Br4923 IIK------------------------
Mflv_2606|M.gilvum_PYR-GCK ARK------------------------
Mvan_5291|M.vanbaalenii_PYR-1 SSTGLG---------------------
TH_1081|M.thermoresistible__bu SLGKARV--------------------
MAB_2624c|M.abscessus_ATCC_199 HQKLMAYWRKTSERLSAQKPDEVEAGA
MAV_1539|M.avium_104 DNGFRIGRRVVAGVASVK---------