For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TSTQPTELDEALVRIRAVFDALAEGAAERDQANEHPYALVSDLAGAGFGRLRLPREFGGFGVDLPTLFAL LAEAGQADSNLPQIWRGHFTTTEILLRECDQDARRHWSEKIAAGAVFGNAQSEPSSVVAGIDPTDGCGAI TTRVRINDRGRRVVSGTKFYSTGSRFADYIRAAVLDEQGRRRFVVIPARHPGVDHVDDWDGIGQRQTGSG TTILTDVPVEPHGCIGHHLHSVQGLDSFVQIVHLANLTGIARSIVAETVDIVRTRTRTSRHALTQSAAND PDVLAVIGKLQARRLTAEVLLDRAARRLEAAHAAGDEDSYAEAYTETSTAQVAVIEAVLDAATTAFDAGG SSAVRTRVHLDRHWRNARTLASHNPVIYKPRVIGDFLVNGNRPVSGYYNGHDTGVDAS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4097 | - | - | 100% (409) | acyl-CoA dehydrogenase domain-containing protein |
| M. smegmatis MC2 155 | MSMEG_5001 | - | 1e-61 | 36.36% (396) | pesticide degrading monooxygenase |
| M. smegmatis MC2 155 | MSMEG_4547 | - | 1e-60 | 37.25% (400) | acyl-CoA dehydrogenase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2528c | fadE19 | 2e-07 | 20.05% (364) | acyl-CoA dehydrogenase |
| M. gilvum PYR-GCK | Mflv_2554 | - | 3e-10 | 22.19% (365) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv2500c | fadE19 | 2e-07 | 20.05% (364) | acyl-CoA dehydrogenase |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 8e-06 | 26.55% (177) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_1422c | - | 4e-61 | 36.64% (393) | putative acyl-CoA dehydrogenase |
| M. marinum M | MMAR_3847 | fadE19 | 2e-11 | 22.16% (361) | acyl-CoA dehydrogenase FadE19 |
| M. avium 104 | MAV_3422 | - | 1e-60 | 38.86% (386) | acyl-CoA dehydrogenase domain-containing protein |
| M. thermoresistible (build 8) | TH_3721 | - | 3e-47 | 40.60% (298) | PUTATIVE putative acyl-CoA dehydrogenase family protein |
| M. ulcerans Agy99 | MUL_3778 | fadE19 | 4e-11 | 21.88% (361) | acyl-CoA dehydrogenase FadE19 |
| M. vanbaalenii PYR-1 | Mvan_3173 | - | 2e-32 | 28.68% (401) | acyl-CoA dehydrogenase type 2 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_4097|M.smegmatis_MC2_155 ------MTSTQPTELDEALVRIRAVFDALAEGAAE---RDQA--NEHPYA
TH_3721|M.thermoresistible__bu ------VPYFDEQRFEALAAEFRPVFDRIRAGAVQ---RERD--RELPFE
MAB_1422c|M.abscessus_ATCC_199 ---MTSAPSVLEIRALPGTDTYRNLLAQVAEGARD---RDLD--DENPFD
MAV_3422|M.avium_104 ---MPVAFHRQDT--PAGAAAVQPVLAEIAADYRL---RLADGGTEPPLR
Mb2528c|M.bovis_AF2122/97 --MTTTTTTISGGILPKEYQDLRDTVADFARTVVAPVSAKHDAEHSFPYE
Rv2500c|M.tuberculosis_H37Rv --MTTTTTTISGGILPKEYQDLRDTVADFARTVVAPVSAKHDAEHSFPYE
MMAR_3847|M.marinum_M -----MTTAISAGTLPKEYQDLRDTVADFARSVVAPVSAKHDEEHSFPYE
MUL_3778|M.ulcerans_Agy99 -----MTTAISAGTLPKEYQDLRDTVADFARSVVAPVSAKHDEEHSFPYE
Mflv_2554|M.gilvum_PYR-GCK -----MSDFLSTGTLPDHYAQLAKTVRDFAQSVVAPVAAKHDEEHSFPYE
MLBr_00737|M.leprae_Br4923 MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVDQRARFPEE
Mvan_3173|M.vanbaalenii_PYR-1 --MATDITDRIPDTLLRTPADALAAAEEVAEAIAAG-SAERERAGAVLTP
.
MSMEG_4097|M.smegmatis_MC2_155 LVSDLAGAGFGRLRLPREFGGFGVDLPTLFALLAEAGQADSNLPQIWRGH
TH_3721|M.thermoresistible__bu QIGWLKAAGFGAVRLPVSAGGRGATIPELTRLLIELSTADSNITQALRGH
MAB_1422c|M.abscessus_ATCC_199 QVRLLKEAGFGRLRIPTELGGAGLSVRQLFSAIIDVAQADPIVAHIFRTH
MAV_3422|M.avium_104 GLKLVRDHRLGALRLARELGGAGYTAPEFFDYLVALAAADPDLAHILRIH
Mb2528c|M.bovis_AF2122/97 IVAKMGEMGLFGLPFPEEYGGMGGDYFALSLVLEELGKVDQSVAITLEAA
Rv2500c|M.tuberculosis_H37Rv IVAKMGEMGLFGLPFPEEYGGMGGDYFALSLVLEELGKVDQSVAITLEAA
MMAR_3847|M.marinum_M VVAKMGEMGLFGLPFPEEYGGMGGDYFALALALEELGKVDQSVAITLEAG
MUL_3778|M.ulcerans_Agy99 VVAKMGEMGLFGLPFPEEYGGMGGDYFALALALEELGKVNQSVAITLEAG
Mflv_2554|M.gilvum_PYR-GCK VVSGMADMGLFGLPFPEEYGGMGGDYFALCLALEELGKVDQSVAITLEAG
MLBr_00737|M.leprae_Br4923 ALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVDASASLIPAVN
Mvan_3173|M.vanbaalenii_PYR-1 QLRLVAESGLLGISVPTAHGGPGLPASTVVEVLRRLARADGAVGQLLLSH
: : : : .. ** * : . .:
MSMEG_4097|M.smegmatis_MC2_155 FTTTEILLREC-DQDARRHWSEKIAAGAVFGNAQSEPSSVVAGIDPTDGC
TH_3721|M.thermoresistible__bu FAFAEDRLVAA-PGPGRDRWWQRFAAGDLAGNAWTEIGDVVLG-------
MAB_1422c|M.abscessus_ATCC_199 FWFVEERLRTL-ADPVSAAWLTKVNEGNLFANAFSEKGSLAVG-------
MAV_3422|M.avium_104 YALVEELQVTP-RRPGSDRWIAVVAEGGLIGGANAEQSQKSVG-------
Mb2528c|M.bovis_AF2122/97 VGLGAMPIYRFGTEEQKQKWLPDLTSGRALAGFGLTEPGAGSD-------
Rv2500c|M.tuberculosis_H37Rv VGLGAMPIYRFGTEEQKQKWLPDLTSGRALAGFGLTEPGAGSD-------
MMAR_3847|M.marinum_M VGLGAMPIYRFGNEEQKSKWLPDLLAGRALAGFGLTEPGAGSD-------
MUL_3778|M.ulcerans_Agy99 VGLGAMPIYRFGNEEQKSKWLPDLLAGRALAGFGLTEPGAGSD-------
Mflv_2554|M.gilvum_PYR-GCK VSLGAMPVYRFGNESQKQEWLPLLASGKALGAFGLTEAGGGSD-------
MLBr_00737|M.leprae_Br4923 K-LGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSD-------
Mvan_3173|M.vanbaalenii_PYR-1 FVVAQAISGLGHTQPAP-RIYADLLAGAQLGNASAERGTAHAL-------
. .
MSMEG_4097|M.smegmatis_MC2_155 GAITTRVRINDRGRRVVSGTKFYST--GSRFADYIR-AAVLD-------E
TH_3721|M.thermoresistible__bu EANTKVAPSGDPGTFVVNGQKFYST--GSIFADWIDLYAQRT-------D
MAB_1422c|M.abscessus_ATCC_199 SLVFNTRLLPVGDAYRLNGEKFYST--GTLFADYLT-VTATT-------D
MAV_3422|M.avium_104 GNHRDTRLVTTPDGLRLRGRKFYST--GAQFSDYLR-ITAQD-------D
Mb2528c|M.bovis_AF2122/97 AGSTRTTARLEGDEWIINGSKQFITNSGTDITSLVTVTAVTGTTGTAADA
Rv2500c|M.tuberculosis_H37Rv AGSTRTTARLEGDEWIINGSKQFITNSGTDITSLVTVTAVTGTTGTAADA
MMAR_3847|M.marinum_M AGSTRTTARLDGGEWVVNGSKQFITNSGTDITSLVTITAVTG---SIADG
MUL_3778|M.ulcerans_Agy99 AGSTRTTARLDGGEWVVNGSKQFITNSGTDITSLVTITAVTG---SIADG
Mflv_2554|M.gilvum_PYR-GCK AGATKTTAKSDGASWVINGTKQFITNSGTDITKLVTVTAVTG----ENNG
MLBr_00737|M.leprae_Br4923 AASMRTRAKADGDDWILNGFKCWITNGGK--STWYTVMAVTD----PDKG
Mvan_3173|M.vanbaalenii_PYR-1 --DRRTTVTRRDGHWVLNGTKYYAT--GTLGATWIAVAARIE-----GRE
: * * : * * : :
MSMEG_4097|M.smegmatis_MC2_155 QGRRRFVVIPARHPGVDHVDD-WDGIGQRQTGSGTTILTDVPVEPHGCIG
TH_3721|M.thermoresistible__bu TGEFVIAAVDAHADGVTHADD-WDGFGQRTTGSGTSTYRDVRVPAENLIP
MAB_1422c|M.abscessus_ATCC_199 RDSVASVIVPGDRDGVRLVDD-WDGFGQRRTGTGTTIFSQVDVAADEILS
MAV_3422|M.avium_104 DGAPTAVVIPVDRAGVEHLDD-WDGIGQRQTGSGTTVFNDVAVADDEVFP
Mb2528c|M.bovis_AF2122/97 KKEISTIIVPSGTPGFTVEPV-YNKVGWNASDTHPLTFADARVPRENLLG
Rv2500c|M.tuberculosis_H37Rv KKEISTIIVPSGTPGFTVEPV-YNKVGWNASDTHPLTFADARVPRENLLG
MMAR_3847|M.marinum_M KKEISTIIVPSGTPGFIVEPV-YNKVGWNASDTHPLSFDDARVPEENLLG
MUL_3778|M.ulcerans_Agy99 KKEISTIIVPSGTPGFIVEPV-YNKVGWNASDTHPLSFDDARVPEENLLG
Mflv_2554|M.gilvum_PYR-GCK KKEISSILVPVPTEGFTAEPA-YNKVGWNASDTHPLSFDDVRVPQENLLG
MLBr_00737|M.leprae_Br4923 ANGISAFIVHKDDEGFSIGPK-EKKLGIKGSPTTELYFDKCRIPGDRIIG
Mvan_3173|M.vanbaalenii_PYR-1 NGDTATAFVRPDQEGVTLDLESWSAFGQRGTASGEVRLNNVVVDDDLLID
: *. . .* . : : . : . :
MSMEG_4097|M.smegmatis_MC2_155 HHLHSVQGLD------SFVQIVHLANLTGIARSIVAETVDIVRTRTRTSR
TH_3721|M.thermoresistible__bu FATR-FRYQT------AFYQLFHLATLAGIAHAATAELAQRVRGRTRTFS
MAB_1422c|M.abscessus_ATCC_199 ETPYDAAPVPTT--QYASLQLYILAIVAGVLRAVVDDGEALLRSRQRNFS
MAV_3422|M.avium_104 LG--STIGVNRA--RGALVQLYLHAVAAGILRSLTEDAAALVRGRRRTYT
Mb2528c|M.bovis_AF2122/97 ARGSGYANFLS---ILDEGRIAIAALATGAAQGCVDESVKYANQRQS---
Rv2500c|M.tuberculosis_H37Rv ARGSGYANFLS---ILDEGRIAIAALATGAAQGCVDESVKYANQRQS---
MMAR_3847|M.marinum_M IRGKGYANFLS---ILDEGRIAIAALATGVAQGCVDESVKYAKERQS---
MUL_3778|M.ulcerans_Agy99 IRGKGYANFLS---ILDEGRIAIAALATGVAQGCVDESVKYAKERQS---
Mflv_2554|M.gilvum_PYR-GCK ERGRGYANFLR---ILDEGRIAIAALSVGAAQGCVDESVKYAKERQA---
MLBr_00737|M.leprae_Br4923 EPGTGFKTALA---TLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQ---
Mvan_3173|M.vanbaalenii_PYR-1 EGPPPDPITADPSVLGAFDQALHAAIDIGIARAALEDGAVFVRTRSRPWK
: * * :. . *
MSMEG_4097|M.smegmatis_MC2_155 HALTQSAA---NDPDVLAVIGKLQARRLTAEVLLDRAARRLEAAHAAGDE
TH_3721|M.thermoresistible__bu HGNAPRYA---ADPQIQQVVGEVMAAAFAAEAIALRAAEDXXXRRRSS--
MAB_1422c|M.abscessus_ATCC_199 HALTERPV---DDPLLQRTLGELSATAFAAEATVLAAADAIEAATATLRD
MAV_3422|M.avium_104 FASADTPT---ADPQLLQIVGEIDAVAYTAHALVRNAAAELAPALQAARD
Mb2528c|M.bovis_AF2122/97 --FGQPIG---AYQAIGFKIARMEARAHVARTAYYDAAAKMLA-------
Rv2500c|M.tuberculosis_H37Rv --FGQPIG---AYQAIGFKIARMEARAHVARTAYYDAAAKMLA-------
MMAR_3847|M.marinum_M --FGQPIG---SYQAISFKIARMEARAHVARTAYYEAAAKMLA-------
MUL_3778|M.ulcerans_Agy99 --FGQPIG---SYQAISFKIARMEARAHVARTAYYEAAAKMLA-------
Mflv_2554|M.gilvum_PYR-GCK --FGAAIG---TYQAIAFKIARMEARAHTARAAYYDAAALMLS-------
MLBr_00737|M.leprae_Br4923 --FGESIS---TFQSIQFMLADMAMKVEAARLIVYAAAARAER-------
Mvan_3173|M.vanbaalenii_PYR-1 EALDAGIERADQEPHVVRRFGELTARLYALEALLARGTALIDEAYAAPEV
: .. : . . .:
MSMEG_4097|M.smegmatis_MC2_155 -----DSYAEAYTETSTAQVAVIEAVLDAATTAFDAGGSSAVRTRVHLDR
TH_3721|M.thermoresistible__bu --------------------------------------AAPPRRRTRPRS
MAB_1422c|M.abscessus_ATCC_199 GVPDAQLAQEAQVAVAKAKVHIDAVALDAATKLLDLGGASAASRTRNLDR
MAV_3422|M.avium_104 TGIDPELEAAASIAAARVKVAIQEPALRAASRVFDAGGASAVQASALLDR
Mb2528c|M.bovis_AF2122/97 ------GKP-FKKEAAIAKMISSEAAMDNSRDATQIHGGYGFMNEYPVAR
Rv2500c|M.tuberculosis_H37Rv ------GKP-FKKEAAIAKMISSEAAMDNSRDATQIHGGYGFMNEYPVAR
MMAR_3847|M.marinum_M ------GKP-FKKEAAIAKMISSEAAMDNARDATQVHGGYGFMNEYPVAR
MUL_3778|M.ulcerans_Agy99 ------GKP-FKKEAAIAKMISSEAAMDNARDAAQVHGGYGFMNEYPVAR
Mflv_2554|M.gilvum_PYR-GCK ------GKP-FKKAASVAKMVASEAAMDNARDATQIFGGYGFMNEYSVAR
MLBr_00737|M.leprae_Br4923 ------GEPDLGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVER
Mvan_3173|M.vanbaalenii_PYR-1 TR---DAAAQASLTVAAAKALAQQDAVEIAGAIFELTGTSGTDGAVNLDR
MSMEG_4097|M.smegmatis_MC2_155 HWRNARTLASHNPVIYKPRVIGDFLVNGNRPVSGYYNGHDTGVDAS
TH_3721|M.thermoresistible__bu CWDATRSSSVCVPRSRPPRCTSPWAP---RPMSG------------
MAB_1422c|M.abscessus_ATCC_199 HWRNIRTISLHNPVHYKARVIGQNLLHGTPLPANAYF---------
MAV_3422|M.avium_104 HWRNLRTLFSHNPTVYKARVLGDVVVNGAALPDTSFF---------
Mb2528c|M.bovis_AF2122/97 HYRDSKVLEIGEGTTEVQLMLIARSLGLQ-----------------
Rv2500c|M.tuberculosis_H37Rv HYRDSKVLEIGEGTTEVQLMLIARSLGLQ-----------------
MMAR_3847|M.marinum_M HYRDSKILEIGEGTTEVQLMLIARSLGLS-----------------
MUL_3778|M.ulcerans_Agy99 HYRDSKILEIGEGTTEVQLMLIARSLGLS-----------------
Mflv_2554|M.gilvum_PYR-GCK HYRDSKILEIGEGTTEVQLMLIGRELGL------------------
MLBr_00737|M.leprae_Br4923 FMRDAKITQIYEGTNQIQRVVMSRALLR------------------
Mvan_3173|M.vanbaalenii_PYR-1 HWRNVRVHSLHDPARWKYVHLGNHTLHDTRPPRLGLIL--------
: