For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DDSYEALLQHFMPDRDSSERLGGRRLTHMDRVGIDVQVVSHGANNPGSLNHHEATELCRTANDALAQDIS EHPTRFRGFATIPLHDPHAAADEMRRCVNELGFVGTLVMGTCAGTFLDDDRYEPVLSAAEEVDRPIYLHP GLPPASVSNAYYAGNWPGAVQWVFAGPGFGWHAEAGIHTIRMILSGALDRHPNLKMLSGHWGEFVAGWLD RLDEVFAWCHHLDRPISQYYRDHVWITPSGMFNQNRLKFILAELGHERIIYSEDYPYVESESVSEFLESA ELSEDQRASIAHRNAQNLLHI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4063 | - | - | 100% (302) | amidohydrolase family protein |
M. smegmatis MC2 155 | MSMEG_5364 | - | 2e-51 | 38.79% (281) | amidohydrolase 2 |
M. smegmatis MC2 155 | MSMEG_6813 | - | 2e-17 | 23.96% (288) | amidohydrolase 2 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3540c | - | 4e-08 | 26.67% (240) | hypothetical protein Mb3540c |
M. gilvum PYR-GCK | Mflv_0351 | - | 1e-06 | 25.56% (270) | amidohydrolase 2 |
M. tuberculosis H37Rv | Rv3510c | - | 4e-08 | 26.67% (240) | hypothetical protein Rv3510c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0299 | - | 1e-19 | 24.84% (314) | putative amidohydrolase (aminocarboxymuconate-semialdehyde |
M. marinum M | MMAR_1500 | - | 2e-09 | 27.27% (154) | hypothetical protein MMAR_1500 |
M. avium 104 | MAV_0481 | - | 1e-108 | 63.70% (292) | amidohydrolase family protein |
M. thermoresistible (build 8) | TH_4037 | - | 5e-07 | 24.58% (240) | PUTATIVE amidohydrolase 2 |
M. ulcerans Agy99 | MUL_2437 | - | 2e-08 | 25.97% (154) | hypothetical protein MUL_2437 |
M. vanbaalenii PYR-1 | Mvan_0901 | - | 1e-08 | 23.30% (309) | amidohydrolase 2 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4063|M.smegmatis_MC2_155 -------------------------------------------------- MAV_0481|M.avium_104 -------------------------------------------------- Mb3540c|M.bovis_AF2122/97 -------------------------------------------------- Rv3510c|M.tuberculosis_H37Rv -------------------------------------------------- Mflv_0351|M.gilvum_PYR-GCK MPEPAPQFRDAPIFDADQHMYETPDALTKFLPDRYTR-AVQYGQFGRHTR TH_4037|M.thermoresistible__bu ---VIMTELDYRAIDVDNHYYEPLDAFTRYLPKEFTRRGVQMLTDGKRTF MMAR_1500|M.marinum_M -------------------------------------------------- MUL_2437|M.ulcerans_Agy99 -MGTRLEPHRGRRIHLGADDLPGNQHLGPYSRGTAHHRQVGPVQDGGAFV MAB_0299|M.abscessus_ATCC_1997 -------------------------------------------------- Mvan_0901|M.vanbaalenii_PYR-1 ------MGSSTLIIDTDTHITEPPDLWTSRMSK------SRWGNLIPEVK MSMEG_4063|M.smegmatis_MC2_155 -----------------------------MDDSYEALLQH---FMPDRDS MAV_0481|M.avium_104 -MRIITVEEHFQHPEVS------ARVAELTGPAVEGLAEFGNAFSLDPDS Mb3540c|M.bovis_AF2122/97 ----MTIDVWMQHPTQR----------FLHGDMFASLRRWTGGSIPETDI Rv3510c|M.tuberculosis_H37Rv ----MTIDVWMQHPTQR----------FLHGDMFASLRRWTGGSIPETDI Mflv_0351|M.gilvum_PYR-GCK IVINNRVSDFIPNPTFERVAAPGAHEKFFAGENTEGLTLR-EMQGPAIEA TH_4037|M.thermoresistible__bu ALMGEKVNHFIPNPTFDPIIEPGCLDLLFRGEIPEGVDPGSLMKVDRLAN MMAR_1500|M.marinum_M ------------------MWRIDTHHHMIPPDYRRALRNAGVDGAGGRAL MUL_2437|M.ulcerans_Agy99 AAARGQRGAALRPGKEFAIWRIDTHHHMIPPDYRRALRNAGVDGAGGRAL MAB_0299|M.abscessus_ATCC_1997 ----------MTSVRIDIHAHLWSDEYLSLLDGYGRPATDVHRGLGAGAT Mvan_0901|M.vanbaalenii_PYR-1 WVEEKQGEYWCMDGQPVFTVGTCIMVPGEDGKPVRSPRFPDYADRFSSMH MSMEG_4063|M.smegmatis_MC2_155 SERLGGR--RLTHMDRVGIDVQVVSHGANNPGS----LNHHEATELCRTA MAV_0481|M.avium_104 TARLGGN--RLAHMDQVGIDVQVVSHGNGSPGT----LQHPEAVELCRRV Mb3540c|M.bovis_AF2122/97 PIEAT-----VSSMDAGGVTLGLLSAWRGPNGQ----DLISNDAVAEWVR Rv3510c|M.tuberculosis_H37Rv PIEAT-----VSSMDAGGVTLGLLSAWRGPNGQ----DLISNDAVAEWVR Mflv_0351|M.gilvum_PYR-GCK PAATRNPADRVAELDRQGVREALNYPTLASLIE----HATADDPELTLAV TH_4037|M.thermoresistible__bu HPEYQNRDERVKILDKQNLETVFMLPTFACGVE----EGLKHDIEATMVS MMAR_1500|M.marinum_M PDWSPAG--SLQAMAELTVGAAILSVSAPATAF----LPQASDAAALARD MUL_2437|M.ulcerans_Agy99 PDWSPAG--SLQAMAELTVGAAILSVSAPATAF----LPQASDAAALARD MAB_0299|M.abscessus_ATCC_1997 RDDLDGR---FELMDEAGVDLQILTATPASPHF----EDQAAAVASARFI Mvan_0901|M.vanbaalenii_PYR-1 PSAYDAK-ARLEVMDAYGIQAAAIFPNLGFVGPNIFAAAGPDALEFQTAA . : : MSMEG_4063|M.smegmatis_MC2_155 NDALAQDISEH------PTRFRGFATIPLHDPHAAADEMRRCVNELGFVG MAV_0481|M.avium_104 NNDLAAQIAEN------PDRFRGFATLPLYDPAAAAEELRRCVGDLGFVG Mb3540c|M.bovis_AF2122/97 LYPN---------------RFAGLAAVDLDRPMAAVRELRRRVGEGFVGL Rv3510c|M.tuberculosis_H37Rv LYPN---------------RFAGLAAVDLDRPMAAVRELRRRVGEGFVGL Mflv_0351|M.gilvum_PYR-GCK IHALNQWMAEHWTFDY-QGRVFSTPIINLSEVDGAQRELEYILTQGARVA TH_4037|M.thermoresistible__bu LHAFNLWLDEDWGFDRPDGRILSAPMISLADPEKAVEEVEFVLNRGARIV MMAR_1500|M.marinum_M INDYAADIVAG-----RPTQFGFFATVPMPHLDQSVAETVRALDDLKADG MUL_2437|M.ulcerans_Agy99 INDYAADVVAG-----RPAQFGFFATVPMPHLDQSVAETVRALDDLKADG MAB_0299|M.abscessus_ATCC_1997 NDEYAKLSSEY------PGRFGALASLPLPHVPAALEELARAIDELGMYG Mvan_0901|M.vanbaalenii_PYR-1 LQAYNDFLLDWSS--IAPDRLLSLALIPYWDVDAAVAEIERCAAAGHKGL :. . : : * MSMEG_4063|M.smegmatis_MC2_155 TLVMGTCAG----TFLDDDRYEPVLSAAEEVDRPIYLHPGLPPASVSNAY MAV_0481|M.avium_104 ALIAGSYDG----LFLDDERFDPILTAAEAVDFPIYVHPGLPEAPVSQRY Mb3540c|M.bovis_AF2122/97 RVVPWLWG-----APPTDRRYYPLFAECVQSAVPFCTQVGHTG------- Rv3510c|M.tuberculosis_H37Rv RVVPWLWG-----APPTDRRYYPLFAECVQSAVPFCTQVGHTG------- Mflv_0351|M.gilvum_PYR-GCK LIKPGPVNGLRGWRSPALPEFDPFWRDVESAGLPIVLHASYPPLDDYVGK TH_4037|M.thermoresistible__bu CVRPAPVPGVVKPRSLGDPVHDPVWARLAEAGVPVIFHLSDSGYLAISAL MMAR_1500|M.marinum_M VVLLANHAG----VYLGEDGQDDLFTALNSRAAVVFVHPAELPGPAVPG- MUL_2437|M.ulcerans_Agy99 VVLLANHAG----VYLGEDGQDDLFTALNSRAAVVFVHPAELPGPAVPG- MAB_0299|M.abscessus_ATCC_1997 ASITTSVLG----RSIADPIFDPLYAELNRRRAVLFVHPAGCGAESSLIT Mvan_0901|M.vanbaalenii_PYR-1 VSTGKPHEHG--YKLLADRYWDPMWAAAQDANLSISFHVGGGNLSRHLND . . : . MSMEG_4063|M.smegmatis_MC2_155 YAGNWPGAVQWVFAGPGFG--WHAEAGIHTIRMILSGALDRHPNLKMLSG MAV_0481|M.avium_104 YAGSWPASVHMMFSGPAFG--WHAEAGIHIVRLILSGALDRHPTLKLLSG Mb3540c|M.bovis_AF2122/97 ---------------------PLRPSETGRPIPYIDQVALDFPELVIVCG Rv3510c|M.tuberculosis_H37Rv ---------------------PLRPSETGRPIPYIDQVALDFPELVIVCG Mflv_0351|M.gilvum_PYR-GCK WEPPYTQN-FMTQSAFRWMVLGHREIADMITALICHGTLTRFPKLRIASV TH_4037|M.thermoresistible__bu WGGTGTFEGFGKRDPLDNVLLDDRAIHDTMASMIVHQVFTRHPNLKVASI MMAR_1500|M.marinum_M --------------VAPWAGDFLLDTTRAAHLLVRNGIRQRYPDIKFVLS MUL_2437|M.ulcerans_Agy99 --------------VAPWAGDFLLDTTRAAHLLVRNGIRQRYPDINFVLS MAB_0299|M.abscessus_ATCC_1997 ------------DHSLTWSIGAPIEDTVAIMHLIVAGVPSRYPDMKIVTC Mvan_0901|M.vanbaalenii_PYR-1 ERTSVEG---WRATLARLTTSFFLESGITLADLLMSGVLARYPKLRFVSV .* : . MSMEG_4063|M.smegmatis_MC2_155 HWG-EFVAGWLDRLDEVFAWCHH-LDRP--------ISQYYRDHVWITPS MAV_0481|M.avium_104 HWG-ELAAFYLERLDETLGLLPTGLERA--------PSDYYRQQVWITPS Mb3540c|M.bovis_AF2122/97 HVG----YPWTEEMVAVARKHENVYIDT--------SAYTIKR------- Rv3510c|M.tuberculosis_H37Rv HVG----YPWTEEMVAVARKHENVYIDT--------SAYTIKR------- Mflv_0351|M.gilvum_PYR-GCK ENGSSWIFPLFNDFEELAKKMPQNFGEH--------PLDVFRRNIWVSP- TH_4037|M.thermoresistible__bu ENGSYFVYRLIKRLKKAANTAPSHFKED--------PVEQLKNNVWIAP- MMAR_1500|M.marinum_M HAG-GFVPYASHRLALAITADTGRSPAD--------VLEEFSSFYFDTAL MUL_2437|M.ulcerans_Agy99 HAG-GFVPYASHRLALVITADTGRSPAD--------VLEEFSSFYFDTAL MAB_0299|M.abscessus_ATCC_1997 HLG-GALPMVLERAHRQVTEWEATQCPE--------APRDAARRLWYDTV Mvan_0901|M.vanbaalenii_PYR-1 ESAVGWIPFLLESLDFHYKKYEPWLERPEFAGNDMLPSDYFHRQVYAN-- . . . MSMEG_4063|M.smegmatis_MC2_155 GMFNQNRLKFILAELGHERIIYSEDYPYVESESVSEFLESAE-------- MAV_0481|M.avium_104 GMYNQNQLNFMTAELGAQRIIYSEDFPYVVRDNVSTFLEQAG-------- Mb3540c|M.bovis_AF2122/97 --LPGKLVRFMKTDTGQRKVLFGTNYPMIAHTHALTGLDELG-------- Rv3510c|M.tuberculosis_H37Rv --LPGKLVRFMKTDTGQRKVLFGTNYPMIAHTHALTGLDELG-------- Mflv_0351|M.gilvum_PYR-GCK --FWEGCVSDVVTTVGWDKVMFGSDYPHPEGLPEPKGFWKYAEGMDVRRT TH_4037|M.thermoresistible__bu --YYEDDVKLLAETIGVDRILFGSDWPHGEGLADPMTFT-----ADIPQF MMAR_1500|M.marinum_M S-SSAAALPTLIAFAKPGHITFGSDWPFAPTAAGKLFAAGLET------Y MUL_2437|M.ulcerans_Agy99 S-SSAAALPTLIAFAKPGHITFGSDWPFAPTAAGKLFAAGLET------Y MAB_0299|M.abscessus_ATCC_1997 GHDHTPALRAAVASLGVDRLIFGSDFPYQAGPRYVSSATYIEEG------ Mvan_0901|M.vanbaalenii_PYR-1 -YWYEDLQPWHVAAIGEDNLMFETDYPHQTCLDKEEIQHSINEG-----L .: : ::* MSMEG_4063|M.smegmatis_MC2_155 --LSEDQRASIAHRNAQNLLH---I------------------------- MAV_0481|M.avium_104 --LSEADTHAIAHTNAEALLR---I------------------------- Mb3540c|M.bovis_AF2122/97 --LSDEARRDFLHGNAVRVFK---LDPRGKVQT----------------- Rv3510c|M.tuberculosis_H37Rv --LSDEARRDFLHGNAVRVFK---LDPRGKVQT----------------- Mflv_0351|M.gilvum_PYR-GCK YDFMGDNARRFMGLPIANPDP---EAARPPALSTA--------------- TH_4037|M.thermoresistible__bu PEFSHEDTRKVMRG--NALTL---LGANVPATA----------------- MMAR_1500|M.marinum_M PALDAAARGAIDRGSALSLFPRFGVAAPPPQPSAAQRIRHTLSRTAMRGV MUL_2437|M.ulcerans_Agy99 PALDAAARGAIDRGSALSLFPRFGVAAPPPQPSAAQRIRHTLSRTAMRGV MAB_0299|M.abscessus_ATCC_1997 --LSAEDASAILDHNGAELLG---LTGV---------------------- Mvan_0901|M.vanbaalenii_PYR-1 SGVSETTKEKILWRNAASLFN---MDIAKLEKLT---------------- . . MSMEG_4063|M.smegmatis_MC2_155 -------- MAV_0481|M.avium_104 -------- Mb3540c|M.bovis_AF2122/97 -------- Rv3510c|M.tuberculosis_H37Rv -------- Mflv_0351|M.gilvum_PYR-GCK -------- TH_4037|M.thermoresistible__bu -------- MMAR_1500|M.marinum_M ARLMNSGG MUL_2437|M.ulcerans_Agy99 ARLMNSGG MAB_0299|M.abscessus_ATCC_1997 -------- Mvan_0901|M.vanbaalenii_PYR-1 --------