For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MHTVINSQGTGMKIGISTFVNDDTIDAVTLARAIEERGFHSLVIAEHSHIPASRESAYPGGDELPQKYYR TLDPFVTLAAAAAVTTKIELFTGVALLIQRDVIHTAKEAASVDLISNGRFVFGVGAGWNLEEMRNHGTDP KTRGRLLDEQIEAIKALWTQEPAEYHGKYVDIESSYMRPKPVQKPHPPIYIGGASEATVKRVIRHDAGWI SNPLPVDFLSKFVTQMRDGLGHEVPLAQFGTPADPEYWGAVEELGFGQIALLLPTLPTDESLRMLDDYAT AVEKYRG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1996 | - | - | 100% (287) | N5,N10- methylenetetrahydromethanopterin reductase-related protein |
M. smegmatis MC2 155 | MSMEG_6703 | - | 2e-44 | 40.58% (276) | N5,N10- methylenetetrahydromethanopterin reductase-related |
M. smegmatis MC2 155 | MSMEG_5520 | - | 3e-41 | 41.90% (210) | hypothetical protein MSMEG_5520 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3106c | - | 8e-71 | 50.94% (267) | hypothetical protein Mb3106c |
M. gilvum PYR-GCK | Mflv_1017 | - | 1e-121 | 73.91% (276) | luciferase family protein |
M. tuberculosis H37Rv | Rv3079c | - | 9e-71 | 50.94% (267) | hypothetical protein Rv3079c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4908c | - | 6e-44 | 39.42% (274) | putative luciferase-like oxidoreductase |
M. marinum M | MMAR_3559 | - | 1e-125 | 78.10% (274) | hypothetical protein MMAR_3559 |
M. avium 104 | MAV_1077 | - | 2e-42 | 39.54% (263) | hypothetical protein MAV_1077 |
M. thermoresistible (build 8) | TH_2750 | - | 1e-118 | 72.83% (276) | PUTATIVE luciferase family protein |
M. ulcerans Agy99 | MUL_2792 | - | 1e-114 | 76.95% (256) | hypothetical protein MUL_2792 |
M. vanbaalenii PYR-1 | Mvan_5819 | - | 1e-123 | 77.37% (274) | luciferase family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3106c|M.bovis_AF2122/97 -----------MQFGVLTFVTDEGIGPAELGAALEHRGFESLFLAEHTHI Rv3079c|M.tuberculosis_H37Rv -----------MQFGVLTFVTDEGIGPAELGAALEHRGFESLFLAEHTHI MMAR_3559|M.marinum_M -----------MKFGISTFVNDDSIDPVSLARAIEERGFSSLVIAEHTHI MUL_2792|M.ulcerans_Agy99 -----------MKFGISTFVNDDSIDPVSLARAIEERGFSSLVIAEHTHI MSMEG_1996|M.smegmatis_MC2_155 MHTVINSQGTGMKIGISTFVNDDTIDAVTLARAIEERGFHSLVIAEHSHI Mflv_1017|M.gilvum_PYR-GCK -----------MKFGISTFPNEDTIDPVSLARAVEERGFAALAVAEHTHI Mvan_5819|M.vanbaalenii_PYR-1 -----------MKFGIATFVNDTTIDPVALARAVEDRGFGSLAVAEHTHI TH_2750|M.thermoresistible__bu -----------MRFGISTFVNDDTIDPVSLATAIEERGFDALTVAEHTHI MAB_4908c|M.abscessus_ATCC_199 ----------MTGFGISTTSADGYVSPDVLARAVEERGFEWLLFDDHSYF MAV_1077|M.avium_104 ----------------MLFTSDRGISPAAAAKLADDHGFATFYVPEHTHI : :.. . :.:** : . :*::: Mb3106c|M.bovis_AF2122/97 PVNTQSPYPG--GGPIP-EKYYRTLDPFVALAAAAATTQSLVLGTGIALI Rv3079c|M.tuberculosis_H37Rv PVNTQSPYPG--GGPIP-EKYYRTLDPFVALAAAAATTQSLVLGTGIALI MMAR_3559|M.marinum_M PASRETPYPG--GGELP-GVYYRTLDPFVTLAAAAAVTSKIELFTGIALL MUL_2792|M.ulcerans_Agy99 PASRETPYPG--GDELP-GVYYRTLDPFVTLAAAAAVTSKIELFTGIALL MSMEG_1996|M.smegmatis_MC2_155 PASRESAYPG--GDELP-QKYYRTLDPFVTLAAAAAVTTKIELFTGVALL Mflv_1017|M.gilvum_PYR-GCK PASRESAYPL--GGELP-KIYYRTLDPFVTLAAAAAVTSEIELITGIALL Mvan_5819|M.vanbaalenii_PYR-1 PASRESAYPL--GGELP-SIYYRTLDPFVTLAAAAAVTTSIELVTGIALL TH_2750|M.thermoresistible__bu PASRESPYPE--GGELP-SVYYRTLDPFVTLAAAAAVTSRIQLITGIALL MAB_4908c|M.abscessus_ATCC_199 PVD--TPDSI--DAEFR-ARLPLIRDLPVVLAYAASATERLIVGSGVALL MAV_1077|M.avium_104 PIKREAAHPTTGDASLPDDRYMRTLDPWVSLGAACAVTSRVRLSTAVALP * . :. . . : * * *. *.:.* : : :.:** Mb3106c|M.bovis_AF2122/97 PERDPIVTAKEVASLDLVSQGRFRFGVGVGWLREEVANHGVDPAVRGRVI Rv3079c|M.tuberculosis_H37Rv PERDPIVTAKEVASLDLVSQGRFRFGVGVGWLREEVANHGVDPAVRGRVI MMAR_3559|M.marinum_M IQRDPITTAKEAASIDLISGGRFVFGVGAGWNIEELRDHGTDPKTRGALL MUL_2792|M.ulcerans_Agy99 IQRDPITTAKEAASIDLISGGRFVFGVGAGWNIEELRDHGTDPKTRGALL MSMEG_1996|M.smegmatis_MC2_155 IQRDVIHTAKEAASVDLISNGRFVFGVGAGWNLEEMRNHGTDPKTRGRLL Mflv_1017|M.gilvum_PYR-GCK IQRDPIITAKEAASIDVISGGRFVFGVGAGWNIEELRHHGTDPKTRGALL Mvan_5819|M.vanbaalenii_PYR-1 IQRDPIITAKEAASIDLISNGRFVFGVGAGWNLEELRHHGTDPKTRGALL TH_2750|M.thermoresistible__bu IQRDPIITAKEAASIDLISDGRFVFGVGAGWNLEEMRHHGTDPRTRGALL MAB_4908c|M.abscessus_ATCC_199 PQRDVLHTAKAWATVATLSGGRTVLGVGVGWNLGEVRNHGIDPAKRGAVL MAV_1077|M.avium_104 VEHDPITLAKSIATLDHLSGGRVSLGVGFGWNTDELADHGVPAGRRRTML ::* : ** *:: :* ** :*** ** *: .** . * :: Mb3106c|M.bovis_AF2122/97 DERLRAIIEIWTQEQAEFHGTYVDFDPIYCWPKPVTKPYPPLYVGGGP-A Rv3079c|M.tuberculosis_H37Rv DERLRAIIEIWTQEQAEFHGTYVDFDPIYCWPKPVTKPYPPLYVGGGP-A MMAR_3559|M.marinum_M DERIEAIKALWTDEPAEYHGKYVDFPPSYSRPKPVRQPHPPIYIGGNSDA MUL_2792|M.ulcerans_Agy99 DERIEAIKALWTDEPAEYHGKYVDFPPSYSRPKPVRQPHPPIYIGGNSDA MSMEG_1996|M.smegmatis_MC2_155 DEQIEAIKALWTQEPAEYHGKYVDIESSYMRPKPVQKPHPPIYIGGASEA Mflv_1017|M.gilvum_PYR-GCK DERIEAIKVLWTQEPAEYHGRFVDFDASYQRPKPVRKPHPPILIGGDSDA Mvan_5819|M.vanbaalenii_PYR-1 DERIEAIKALWTAEPAEYHGKYVDFDASYLRPKPVQKPHPPILIGGDSDA TH_2750|M.thermoresistible__bu DERIEAVKALWTDEPAEYHGRFVDFGPSYLRPKPVQKPHPPIVVGGNSDA MAB_4908c|M.abscessus_ATCC_199 DEQLAALHALWTQEQAEFHGEHVDFGPVVARPRPARP--LPVHVGGPSRA MAV_1077|M.avium_104 REYLEAMRALWTQEEAAYDGEFVKFGPSWAWPKPVQPHIPVLVGAAGNEK * : *: :** * * :.* .*.: . *:*. : .. Mb3106c|M.bovis_AF2122/97 NFPRIARLNAGWIAIS--PSPQRLSGPLQRLRAMAGGD-VPVTVCQWGEA Rv3079c|M.tuberculosis_H37Rv NFPRIARLNAGWIAIS--PSPQRLSGPLQRLRAMAGGD-VPVTVCQWGEA MMAR_3559|M.marinum_M TVKRVVRHDAGWISNP--LPVRQLTQRVDQLRGAAGHD-VPLAMFGT-PN MUL_2792|M.ulcerans_Agy99 TVKRVVRHDAGWISNP--LPVHQLTQRVDQLRSAAGHD-VPLAMFGT-RN MSMEG_1996|M.smegmatis_MC2_155 TVKRVIRHDAGWISNP--LPVDFLSKFVTQMRDGLGHE-VPLAQFGT-PA Mflv_1017|M.gilvum_PYR-GCK TVRRIIRHGAGWIANP--LPIDHLSRRIEQIREGAGGD-VPLCQFGT-PV Mvan_5819|M.vanbaalenii_PYR-1 AVKRIIRHEAGWISNP--LPVDTLRRRVDQIRAGARHE-VPLSMFGT-PV TH_2750|M.thermoresistible__bu TVRRIIRHGAGWMSNP--HPPEMLKRRVQQIRDGAGHD-VLLTTFGT-PV MAB_4908c|M.abscessus_ATCC_199 AQARALRVGDGWLPYAGTSTPDDVRRACGWFAEQGRAD-LPVTVSGV--- MAV_1077|M.avium_104 NFKWIARSADGWITTPRDFDIDEPVKLLQDTWAAAGRDGAPQIVALDFKP * **:. . : Mb3106c|M.bovis_AF2122/97 AAKDLEGYRHLGVE---RVLLELPT-----------EPRD--------PT Rv3079c|M.tuberculosis_H37Rv AAKDLEGYRHLGVE---RVLLELPT-----------EPRD--------PT MMAR_3559|M.marinum_M KPDYWRAAQDLGFG---QLALLLPT-----------CPRD--------ES MUL_2792|M.ulcerans_Agy99 KPDYWRAAQDLGFGPAGAAAAHLPAGGVPAAARRIRCPGGSIPPVEVPGG MSMEG_1996|M.smegmatis_MC2_155 DPEYWGAVEELGFG---QIALLLPT-----------LPTD--------ES Mflv_1017|M.gilvum_PYR-GCK KPEYWQAAEELGFG---QLNLLLPT-----------KSRD--------VS Mvan_5819|M.vanbaalenii_PYR-1 KPEYWQAAEDLGFG---QLNLLLPT-----------KPRD--------ES TH_2750|M.thermoresistible__bu DPGYWEVLEELGYQ---QANLLLPT-----------RPRD--------ES MAB_4908c|M.abscessus_ATCC_199 PGDHQLAGEYLGAG---AERVLFDV-----------HPLN------EADT MAV_1077|M.avium_104 DAEKLARWAELGVT---EVLFGLPD-----------KSED--------EV ** : . . Mb3106c|M.bovis_AF2122/97 LRYLDKLQAELARLA----------------------------- Rv3079c|M.tuberculosis_H37Rv LRYLDKLQAELARLA----------------------------- MMAR_3559|M.marinum_M LRLLDEYAALVAQYHR---------------------------- MUL_2792|M.ulcerans_Agy99 PSFLREPLARVSCASRRKIAPRFAAQCDFASARGGRLRVGSRPR MSMEG_1996|M.smegmatis_MC2_155 LRMLDDYATAVEKYRG---------------------------- Mflv_1017|M.gilvum_PYR-GCK LRLLDDYAEQVARYIG---------------------------- Mvan_5819|M.vanbaalenii_PYR-1 LRLLDGYAEQVARY------------------------------ TH_2750|M.thermoresistible__bu LRMLDQFAERVAGYRG---------------------------- MAB_4908c|M.abscessus_ATCC_199 LRALDRLTEVVARLT----------------------------- MAV_1077|M.avium_104 AAYVERLAGKLAALV----------------------------- : :