For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAVFTFAELTPTSLLQRSAQAFPDRLAIVDGELRLTYTQFAERCGRVTSALAAAGVQPGDRVAALCTNSH VMLELHQAVPARGAVLVPLNTRLAFEEMQYIIGHAGARILIATREFADRARELADDAGIDVVIEGDGYEE WLPDVASPEDRVAVGERDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHC NGWCFTWAVGAAGGTHICLRKIDSAEIWRWLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHVDTGGAP PSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQGVGNIIANPLRVVDLGG DDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDGYFLTGDLAAMHPDGYVEIRDRAKDVIISGGEN IASIEIEKVIDSHPEVVESAVVGVADEKWGEVPVAFITRRDGSDVTFDQLTTFLREHLAGFKVPRTMVFD HLPKTSTGKIQKNVLRARAEQDKAN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1982 | - | - | 100% (515) | acyl-CoA synthase |
M. smegmatis MC2 155 | MSMEG_4065 | - | 1e-61 | 33.27% (520) | feruloyl-CoA synthetase |
M. smegmatis MC2 155 | MSMEG_2883 | - | 1e-58 | 32.09% (511) | acyl-CoA synthetase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3116 | fadD13 | 5e-60 | 33.07% (502) | chain-fatty-acid-CoA ligase |
M. gilvum PYR-GCK | Mflv_0027 | - | 3e-66 | 32.86% (496) | AMP-dependent synthetase and ligase |
M. tuberculosis H37Rv | Rv3089 | fadD13 | 5e-60 | 33.07% (502) | chain-fatty-acid-CoA ligase |
M. leprae Br4923 | MLBr_02546 | fadD2 | 1e-35 | 25.64% (507) | acyl-CoA synthetase |
M. abscessus ATCC 19977 | MAB_3592c | - | 3e-85 | 38.99% (536) | putative medium-chain acyl-CoA ligase |
M. marinum M | MMAR_4412 | fadD14 | 1e-61 | 30.61% (526) | medium chain fatty-acid-CoA ligase FadD14 |
M. avium 104 | MAV_1186 | - | 3e-64 | 33.08% (529) | acyl-CoA synthetase |
M. thermoresistible (build 8) | TH_3031 | - | 1e-149 | 53.07% (505) | PUTATIVE acyl-CoA synthase |
M. ulcerans Agy99 | MUL_0229 | fadD14 | 1e-61 | 30.99% (526) | acyl-CoA synthetase |
M. vanbaalenii PYR-1 | Mvan_0943 | - | 3e-67 | 33.40% (494) | AMP-dependent synthetase and ligase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0027|M.gilvum_PYR-GCK -------------MFHNLADIVRSHGRNRPDAPALIVG--DRT------- Mvan_0943|M.vanbaalenii_PYR-1 -------------MIHNLADIIRVHGRERPGAPALVVG--DRT------- Mb3116|M.bovis_AF2122/97 --------------MKNIGWMLRQRATVSPRLQAYVEPSTDVR------- Rv3089|M.tuberculosis_H37Rv --------------MKNIGWMLRQRATVSPRLQAYVEPSTDVR------- MSMEG_1982|M.smegmatis_MC2_155 ---MAVF----TFAELTPTSLLQRSAQAFPDRLAIVDGELR--------- TH_3031|M.thermoresistible__bu VDMMATIGVPPCATALTPTDFLRRSATIFPDRVAVIDGADR--------- MAB_3592c|M.abscessus_ATCC_199 -----------MFFDLSVRDFLDRAELVYPERVGVVDEPVQPAPS----- MMAR_4412|M.marinum_M ------MYSTMQDFPLTITAIMRHGCGVHGSRQVITATGDAYR------- MUL_0229|M.ulcerans_Agy99 ------MYSTMQDFPLTITAIMRHGCGVHGSRQVITATGDAYR------- MAV_1186|M.avium_104 ------MDGTMQDFPLTITAIMRHGCSVHGARTVTTATGDGYR------- MLBr_02546|M.leprae_Br4923 MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVAMRKWGDLAM :. Mflv_0027|M.gilvum_PYR-GCK ---------------------VSYRELDERSNRTAQAFSRTGVGPGDRVA Mvan_0943|M.vanbaalenii_PYR-1 ---------------------VTYGELDDRSSRAAQAFAQAGVGVGDRVA Mb3116|M.bovis_AF2122/97 ---------------------MTYAQMNALANRCADVLTALGIAKGDRVA Rv3089|M.tuberculosis_H37Rv ---------------------MTYAQMNALANRCADVLTALGIAKGDRVA MSMEG_1982|M.smegmatis_MC2_155 ---------------------LTYTQFAERCGRVTSALAAAGVQPGDRVA TH_3031|M.thermoresistible__bu ---------------------TSYIGWYHRVRRMAGLLRKCGVQQGDCVA MAB_3592c|M.abscessus_ATCC_199 ------------------WGQLTYRQLAARARGQAAALDALGVGPGERVA MMAR_4412|M.marinum_M --------------------QTTYREVGQRAAQLANALRGLGISGDQRVA MUL_0229|M.ulcerans_Agy99 --------------------QTTYREVGQRAAQLANALRGLGISGDQRVA MAV_1186|M.avium_104 --------------------RTSYRELGDRAAQLANALRGLGVTGDQRVA MLBr_02546|M.leprae_Br4923 LPAMPARRSPHRAALIDEEGTLTYKELDRAAHALANGLIAKGVRGGDGIA :* : : *: .: :* Mflv_0027|M.gilvum_PYR-GCK FVERNGIEFFDVAFGSAKLGAVAVPVNWRLTAPEMRHVIADCGASVVVVG Mvan_0943|M.vanbaalenii_PYR-1 FVDKNGAEFFEVTFGLAKVGAVGVPVNWRLAAPEMRHIIADSGAKIVVVG Mb3116|M.bovis_AF2122/97 LLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYG Rv3089|M.tuberculosis_H37Rv LLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYG MSMEG_1982|M.smegmatis_MC2_155 ALCTNSHVMLELHQAVPARGAVLVPLNTRLAFEEMQYIIGHAGARILIAT TH_3031|M.thermoresistible__bu VLAPNTSMLLDAHYGVPMAGAVLLTLNIRLTVEDLTYISRHAGAKAVLFD MAB_3592c|M.abscessus_ATCC_199 IVSQNSARLLTSFFGVSGWGRILVPINFRLAPAEIEYIVGHSGASVLVVD MMAR_4412|M.marinum_M TFMWNNAEHLVAYLAVPSMGAVLHTLNIRLFAEQIAYVANEAEDQVVLVD MUL_0229|M.ulcerans_Agy99 TFMWNNAEHLVTYLAVPSMGAVLHTLNIRLFAEQIAYVANEAEDQVVLVD MAV_1186|M.avium_104 TFMWNNAEHLAAYLAVPSMGAVLHTLNIRLFPEQIAYVANEAGDQVVLVD MLBr_02546|M.leprae_Br4923 ILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVSEREGAKVIIYD . * . . * :* .: :: : :: Mflv_0027|M.gilvum_PYR-GCK QEFTGRIEAIADDLDV-----------EVVVIGKHRHWPTFDDLLAAAPA Mvan_0943|M.vanbaalenii_PYR-1 QDFAGHLEAIEDGLDA-----------DIVVIGDHPRWPAFDDWVASHPP Mb3116|M.bovis_AF2122/97 APSAPVIDAIRAQADP-----------PGTVT-DWIGADSLAERLRSAAA Rv3089|M.tuberculosis_H37Rv APSAPVIDAIRAQADP-----------PGTVT-DWIGADSLAERLRSAAA MSMEG_1982|M.smegmatis_MC2_155 REFADRARELAD---------------DAGIDVVIE-GDGYEEWLPDVAS TH_3031|M.thermoresistible__bu DSLAHIAAQLP-------------------IPIQLS-ATEYRRRVADAPE MAB_3592c|M.abscessus_ATCC_199 PEVRGLLDTVRA---------------THNFVLGEDDAAVFGELDSPHAV MMAR_4412|M.marinum_M LSLTNLLAPVLPDLGTVHTVIAVGEGDTAPLEESGKTVLRYDELLDGQPT MUL_0229|M.ulcerans_Agy99 LSLTNLLAPVLPNLDTVHTVIAVGEGDTAALEESGKTVLRYDELLDGQST MAV_1186|M.avium_104 ASLVKLLAPVLPGLHTVHTVIVVGDGDTEPLRASGKTVLRYADVIGAEPA MLBr_02546|M.leprae_Br4923 DEYTKVVSKAEPALGKLRALG----VNPDEEEPPGSTDETLAELIARSSS . Mflv_0027|M.gilvum_PYR-GCK VDPGVVTGPDDLVFLMYTSGTTGAPKGVMLSNAN--VVCKTAGVGGPWKF Mvan_0943|M.vanbaalenii_PYR-1 VDPGVVTGPDDVVLLMYTSGTTGAPKGVMLSNTN--YVYKTGGVAGPWQF Mb3116|M.bovis_AF2122/97 DEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHES--VHSAASSWASTIDV Rv3089|M.tuberculosis_H37Rv DEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHES--VHSAASSWASTIDV MSMEG_1982|M.smegmatis_MC2_155 PEDRVAVGERDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHT--RL TH_3031|M.thermoresistible__bu VEHQVDD-ELALLSLNYTSGTTGRPRGVMYHHRGAYLQALATAYHS--GL MAB_3592c|M.abscessus_ATCC_199 TPDPWSGSETGTATLNYTSGTTSRPKGVQLTHRNIWINAVVFGLHA--TL MMAR_4412|M.marinum_M EFDWPHIDENSAAAMCYTSGTTGHPKGVVYSHRSSFLHSMATCTANGIGV MUL_0229|M.ulcerans_Agy99 EFDWPHIDENSAAAMCYTSGTTGHPKGVVYSHRSSFLHSMATCTANGIGL MAV_1186|M.avium_104 EFDWPRIDENSAAAMCYTSGTTGNPKGVVYSHRSSFLHTMAACTANGIGI MLBr_02546|M.leprae_Br4923 AP--APKVRKRASIIILTSGTTGTPKGANRNTPAS--LAPLGGILSKVPF : *****. *:*. . Mflv_0027|M.gilvum_PYR-GCK DADSVSLAVMPLFHMAGFGWALAGLWEGAVTVVLR-DVDPGAILDAVARH Mvan_0943|M.vanbaalenii_PYR-1 DADAVSLAVMPLFHMAGSGWALAGLWQGATTVVLR-DVEPAAILDAIARH Mb3116|M.bovis_AF2122/97 RYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMP-QFDATKVWSLIVEE Rv3089|M.tuberculosis_H37Rv RYRDRLLLPLPMFHVAALTTVIFSAMRGVTLISMP-QFDATKVWSLIVEE MSMEG_1982|M.smegmatis_MC2_155 DPSTGYLWTLPMFHCNGWCFTWAVGAAGGTHICLR-KIDSAEIWRWLRGG TH_3031|M.thermoresistible__bu SPQTVHLWTLPMFHCHGWSFTWSVTAAGGTHVCLP-KVEPSAIWRHLHDD MAB_3592c|M.abscessus_ATCC_199 RDDDVLLHTLPMFHCNGWGWPYAATGMGARHIVLR-KVDGDEILRRVEQH MMAR_4412|M.marinum_M GSNDRVLPIVPMFHANAWGLPYAALMAGADLVLPDRHLDARSLVHMVENL MUL_0229|M.ulcerans_Agy99 GSSDRVLPIVPMFHANAWGLPYAALMAGADLVLPDRHLDARSLVHMVENL MAV_1186|M.avium_104 GATDSLLPIVPMFHANAWGLPYAALMAGADLVLPDCHLDPRSLVRMVEDL MLBr_02546|M.leprae_Br4923 RAHEVTLLPAPMFHALGYLHATLAMFLGSTLVLRR-RFKPATVLEDIEKH * *:** . * : .. : : Mflv_0027|M.gilvum_PYR-GCK RVTNMLLVPAVIQFLLDTTGLDDT--DLSRLRIVVYGASPITDDVLMRGI Mvan_0943|M.vanbaalenii_PYR-1 RITNMLLVPAVIQFLLDTDGVAEV--DLSTLRVIVYGASPISDDVLVRGI Mb3116|M.bovis_AF2122/97 RVCIGGAVPAILNFMRQVPEFAEL--DAPDFRYFITGGAPMP-EALIKIY Rv3089|M.tuberculosis_H37Rv RVCIGGAVPAILNFMRQVPEFAEL--DAPDFRYFITGGAPMP-EALIKIY MSMEG_1982|M.smegmatis_MC2_155 GITHFSAAPTVLTMIAEDPSAQP--LPAR--VHVDTGGAPPSPALLARL- TH_3031|M.thermoresistible__bu GVNSLNAAPTVLIDLASHHDARR--VAHG--VRVGTGGAPPSPTLLQRL- MAB_3592c|M.abscessus_ATCC_199 GVTVMCAAPTVVDSILDAAARWRGPIPGRDRVRIIVAGAPPPTRTIARVR MMAR_4412|M.marinum_M RPTRAGAVPTIWNDVMHYLEKNPG-HDVSSLGLVACGGSAVPESLMRTFE MUL_0229|M.ulcerans_Agy99 RPTRAGAVPTIWNDVMHYLEKNPG-HDVSSLGLVACGGSAVPESLMRTFE MAV_1186|M.avium_104 RPTVTGAVPTIWNAVLHHLEDDPD-HDMSSLRLVVCGGSAVPVSLMRTFE MLBr_02546|M.leprae_Br4923 QATAMVVVPVMLSRILDTLENLETKSDLSSLRVVFVSGSQLGAELATRAL .*.: : . ..: Mflv_0027|M.gilvum_PYR-GCK DRFGGIFAQVYGMTESTGSVTQLDGD---------EHLPQLLRSCGRPYP Mvan_0943|M.vanbaalenii_PYR-1 ERFGPIFAQVYGMTETTGSITQLDGP---------DHVPALLRSCGRPYP Mb3116|M.bovis_AF2122/97 AAKNIEVVQGYALTESCGGGTLLLSE---------DALRKAG-SAGRATM Rv3089|M.tuberculosis_H37Rv AAKNIEVVQGYALTESCGGGTLLLSE---------DALRKAG-SAGRATM MSMEG_1982|M.smegmatis_MC2_155 TPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQGVGNII TH_3031|M.thermoresistible__bu SELGFDITHYYGLTETYGPAVICEFPAERADSPMIEQARFKARQGNCNIV MAB_3592c|M.abscessus_ATCC_199 TELGWEFIQIYGLTETAPLITMNRFRSEWAGLDVQEQARMLGRAG-APAI MMAR_4412|M.marinum_M EKYGVQIRQLWGMTETSPLATMAWPP---PGTPPDRHWAIRSTQG-QPVC MUL_0229|M.ulcerans_Agy99 EKYGVQIRQLWGMTETSPLATMAWPP---PGTPPDRHWAIRSTQG-QPVC MAV_1186|M.avium_104 EKHGVQIRQLWGMTETSPLATMAWPP---PGTPEDQHWAYRGTQG-QPVC MLBr_02546|M.leprae_Br4923 EELGPVIYNMYGSTEIAFATIAGPKD-----------LQINSATVGPVVK . . : :. ** Mflv_0027|M.gilvum_PYR-GCK WVQIRVVDPTG--RDVAPGTVGEVWTRSDQNMLGYWNNPEATAATLTPDG Mvan_0943|M.vanbaalenii_PYR-1 WVQIRIVDETG--ADAVAGTVGEVWTRSEQNMLGYWNNPDATASTLTADG Mb3116|M.bovis_AF2122/97 FTDVAVRGDDG--VIREHG-EGEVVIKSDILLKEYWNRPEATRDAFDN-G Rv3089|M.tuberculosis_H37Rv FTDVAVRGDDG--VIREHG-EGEVVIKSDILLKEYWNRPEATRDAFDN-G MSMEG_1982|M.smegmatis_MC2_155 ANPLRVVDLGGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRD-G TH_3031|M.thermoresistible__bu GQPLRVVDDRGDDVPADATTMGEIVIRGNTVATGYYRDEEATREAFGS-G MAB_3592c|M.abscessus_ATCC_199 GVRVSVAED------------GEVLTQSNTNLDGYWDQPQATAEALAG-N MMAR_4412|M.marinum_M GVETRIVDDNGEALPNDGQAVGEVEVRGPWITGAYYLG--YDQSKFDS-G MUL_0229|M.ulcerans_Agy99 GVETRIVDDNGEALPNDGQAVGEVEVRGPWITGAYYLG--YDQSEFDS-G MAV_1186|M.avium_104 GVQMRIVDDDGRVLPNDGTAVGEVEVRGPWIAGSYYLG--RDDSKFDS-G MLBr_02546|M.leprae_Br4923 GVKVKILDDSG--KEVPRGQVGRIFVGNAFPFEGYTGG--GGKQIIDG-- : *.: . * Mflv_0027|M.gilvum_PYR-GCK WLRTGDAGYLDRDGYLYLHDRIKDMIVSGAENVYPAEVENVLMTHPAVTD Mvan_0943|M.vanbaalenii_PYR-1 WLKTGDAGYVDDDGYLFLHDRIKDMIVSGGENVYPVEVENVLMTHPAVAD Mb3116|M.bovis_AF2122/97 WFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSE Rv3089|M.tuberculosis_H37Rv WFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSE MSMEG_1982|M.smegmatis_MC2_155 YFLTGDLAAMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVE TH_3031|M.thermoresistible__bu WFRTGDLGVMHPDNYVELRDRAKDVIISGGENISSVEVEQVLDTHPAVRE MAB_3592c|M.abscessus_ATCC_199 WFHTGDRGSVD-DGYLTISDRKKDIIITGGENVTSIEVEDALISHPGVRE MMAR_4412|M.marinum_M WLRTGDVGRIDELGFITLTDRAKDVIKSGGEWISSVELENCLIAHPDVVE MUL_0229|M.ulcerans_Agy99 WLRTGDVGRIDELGFITLTDRAKDVIKSGGEWISSVELENCLIAHPDVVE MAV_1186|M.avium_104 WLRTGDVGRIDERGFVTLTDRAKDVIKSGGEWISSVELENCLIGHPDVVE MLBr_02546|M.leprae_Br4923 LLSSGDVGYFDEHDLLYISGRDDEMIVSGGENVFPAEVEDLISGHPEVVE : :** . .. . : : .* .::* :*.* : . *:*. : * * : Mflv_0027|M.gilvum_PYR-GCK VAVIGIPDTRWG-EAVKAVVVAG--APVTEAELIAFAREQLAGFKLPKSV Mvan_0943|M.vanbaalenii_PYR-1 AAVIGVPDRRWG-EAVKAVVVAARGAQLTEAELIAFARDRIGGFKLPKSV Mb3116|M.bovis_AF2122/97 VAVIGLPDEKWG-EIAAAIVVADQ-NEVSEQQIVEYCGTRLARYKLPKKV Rv3089|M.tuberculosis_H37Rv VAVIGLPDEKWG-EIAAAIVVADQ-NEVSEQQIVEYCGTRLARYKLPKKV MSMEG_1982|M.smegmatis_MC2_155 SAVVGVADEKWGEVPVAFITRRDGSD-VTFDQLTTFLREHLAGFKVPR-T TH_3031|M.thermoresistible__bu CAVVAGPHPRWGEVPVAFVDLEPGAN-ATVEDLIAYARTRLPGFKTPK-T MAB_3592c|M.abscessus_ATCC_199 AAVVGVPDEKWGELVTAVVVVVTLDDPPSGADLIAHCRERLAGYKCPKRV MMAR_4412|M.marinum_M AAVVGVPDERWQERPLAVVVRREGAT-VSAAELRKFLADRVVRWWLPERW MUL_0229|M.ulcerans_Agy99 AAVVGVPDERWQERPLAVVVRREGAT-VSAAELRKFLADRVVRWWLPERW MAV_1186|M.avium_104 AAVVGVPDERWEERPLAVVVVKDGAS-VDADQLRKFLADKVVRWWLPERW MLBr_02546|M.leprae_Br4923 ATAIGVDDKEWG-ARLRAFVVKKQDATIDEDAIKAYVRDHLARYKVPREV :.:. . .* . : . :: : *. Mflv_0027|M.gilvum_PYR-GCK DFVDALPRNPSGKLLKRQLREPYWTDEDRHIG--- Mvan_0943|M.vanbaalenii_PYR-1 DFVDVLPRNPSGKLLKRALREPYWDGADRHIG--- Mb3116|M.bovis_AF2122/97 IFAEAIPRNPTGKILKTVLREQYSATVPK------ Rv3089|M.tuberculosis_H37Rv IFAEAIPRNPTGKILKTVLREQYSATVPK------ MSMEG_1982|M.smegmatis_MC2_155 MVFDHLPKTSTGKIQKNVLRARAEQDKAN------ TH_3031|M.thermoresistible__bu VYIGPLPKTGTGKIQKFRLRDRARHGKYSSDV--- MAB_3592c|M.abscessus_ATCC_199 EFVDSLPRTATGKVQKFRLREQLARD--------- MMAR_4412|M.marinum_M AFADQVPRTSVGKYDKKTIRAGYAEGVYQVTEVHN MUL_0229|M.ulcerans_Agy99 AFADQVPRTSVGKYDKKTIRAGYAESVYQVTDVHN MAV_1186|M.avium_104 TFVDEIPRTSVGKYDKKAVRSRYADGGYRVIEARD MLBr_02546|M.leprae_Br4923 IFLEELPRNPTGKVLKRELRDFEVH---------- :*:. ** * :*