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MSKRVPLWLAVPAMAGLALFLVYPMGYLVALALTKSSLAKPLRGFVGGDNFTAAFASPAFTPSLVRSSVF AVVAAIVTTTLGLAIALLLRQKGSRFGIIGALFLLPLVTAPVLVGVAWKLLLAPVGGGLAGVFDSVGLHG FNPLGSGTGAFVVLLLIHIWQWTPFAVLIAFAALGVVRPELLESARIDGANSWRTFTTVTWPAIAPTLLA VVLLELVIGYKVFDLIVVVTAGGPGFSTSLSPYVIYQTGLRGSFDMGTAAAQTLVFGLVVGAVSTVVTTL RARALKGDG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0554 | - | - | 100% (289) | ABC transporter permease protein, putative |
| M. smegmatis MC2 155 | MSMEG_3110 | - | 5e-32 | 32.22% (270) | binding-protein-dependent transport systems inner membrane |
| M. smegmatis MC2 155 | MSMEG_4466 | - | 7e-32 | 32.61% (276) | ABC transporter, permease protein UspA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2343 | uspA | 1e-31 | 31.52% (276) | sugar-transport integral membrane protein ABC transporter |
| M. gilvum PYR-GCK | Mflv_3776 | - | 2e-35 | 32.32% (263) | binding-protein-dependent transport systems inner membrane |
| M. tuberculosis H37Rv | Rv2316 | uspA | 2e-31 | 31.16% (276) | sugar-transport integral membrane protein ABC transporter |
| M. leprae Br4923 | MLBr_01768 | uspA | 6e-31 | 30.22% (268) | sugar transport integral membrane protein |
| M. abscessus ATCC 19977 | MAB_1373 | - | 2e-29 | 28.73% (275) | sugar ABC transporter, permease protein SugA |
| M. marinum M | MMAR_3617 | uspA | 2e-28 | 28.73% (268) | sugar-transport integral membrane protein ABC transporter |
| M. avium 104 | MAV_2090 | uspA | 3e-31 | 29.48% (268) | ABC transporter, permease protein UspA |
| M. thermoresistible (build 8) | TH_2010 | - | 8e-29 | 29.62% (287) | sugar ABC transporter permease protein |
| M. ulcerans Agy99 | MUL_1248 | uspA | 1e-28 | 28.73% (268) | sugar-transport integral membrane protein ABC transporter |
| M. vanbaalenii PYR-1 | Mvan_2623 | - | 1e-37 | 33.58% (268) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3617|M.marinum_M -----------------------------------MRATPR----RTTAL
MUL_1248|M.ulcerans_Agy99 -----------------------------------MRATPR----RTTAL
MAV_2090|M.avium_104 -----------------------------------MASAERRVAPRSTAL
Mb2343|M.bovis_AF2122/97 -----------------------------------MRDAPR----RRTAL
Rv2316|M.tuberculosis_H37Rv -----------------------------------MRDAPR----RRTAL
MLBr_01768|M.leprae_Br4923 MCAHFNTSMTNTGDDTEQSDEVGSISRLRGRKTHRTRALTKN-HPRSIAL
Mflv_3776|M.gilvum_PYR-GCK -----------------------------------------------MKF
Mvan_2623|M.vanbaalenii_PYR-1 -------------------------------------------MMPSLRF
MSMEG_0554|M.smegmatis_MC2_155 ---------------------------------------------MSKRV
MAB_1373|M.abscessus_ATCC_1997 ----------------------------------MTDRTSSEGKRAERRL
TH_2010|M.thermoresistible__bu ------------MTAIAPGASEHLTGSEADRVARIKHAKQQGVSRAEGWR
MMAR_3617|M.marinum_M AYALLAPSLFGVLAFLLLPILVVIWLSLYRWDLLGP--LRYVGLANWRSV
MUL_1248|M.ulcerans_Agy99 AYALLAPSLFGVLAFLLLPILVVIWLSLYRWDLLGP--LRYVGLANWRSV
MAV_2090|M.avium_104 GYALLAPSLFGVLAFLLLPILVVIWLSLCRWDLLGP--LRFVGLSNWRSV
Mb2343|M.bovis_AF2122/97 AYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGP--LRYVGLTNWRSV
Rv2316|M.tuberculosis_H37Rv AYALLAPSLVGVVAFLLLPILVVVWLSLHRWDLLGP--LRYVGLTNWRSV
MLBr_01768|M.leprae_Br4923 AYALLAPSLFGVVTFLLLPIIVVIWLSLFRWDLLGP--LHYVGLANWRSV
Mflv_3776|M.gilvum_PYR-GCK QHGMVAPLVALFVGVVGFPLGYAAYLSVTDYKLTDQGAPDIVGADNFVAT
Mvan_2623|M.vanbaalenii_PYR-1 QHGMVAPLAALFVGVVGFPLGYAAYLSVTDYKLTDRGAPNLVGADNYVAA
MSMEG_0554|M.smegmatis_MC2_155 PLWLAVPAMAGLALFLVYPMGYLVALALTKSSLAKP-LRGFVGGDNFTAA
MAB_1373|M.abscessus_ATCC_1997 GLLLIAPAALLMLAVTAYPICYAIWLSVQKYSFASPQDRKFVWFDNYITV
TH_2010|M.thermoresistible__bu RRGPLLPALIFMIIVTQVPFLFTLYFSTLSWNLVRPGSREFVGFQNYVDV
* . . *: :: .: * *: .
MMAR_3617|M.marinum_M LRDGDFGNSLVVTAIFVAIVVPAQTVLGLLAAMMLTRRLPGTNFFRTLYV
MUL_1248|M.ulcerans_Agy99 LRDGDFGNSLVVTAIFVAIVVPAQTVLGLLAAMMLTRRLPGTNFFRTLYV
MAV_2090|M.avium_104 LTDAGFGNSLMVTAVFVAMVVPAQTALGLLAATMLARRLPGTGLFRTVYV
Mb2343|M.bovis_AF2122/97 LTDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYV
Rv2316|M.tuberculosis_H37Rv LTDSGFADSLVVTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYV
MLBr_01768|M.leprae_Br4923 LTDPNFANSLIVTAVFVAIVVPTQTMLGLLIATMLARQLPGTGVFRTLYV
Mflv_3776|M.gilvum_PYR-GCK FGDSGFWNAFGTTALYVLVAVGLELVIGLAIALALQKQRWARDLTRSMLL
Mvan_2623|M.vanbaalenii_PYR-1 FSDGAFWGAFGTTALYVLVAVGLELVIGLAIALALQKQRWAKDLTRSMLL
MSMEG_0554|M.smegmatis_MC2_155 FASPAFTPSLVRSSVFAVVAAIVTTTLGLAIALLLRQKGSRFGIIGALFL
MAB_1373|M.abscessus_ATCC_1997 LSDRYWWSALVVTLVITVISVLIELVLGLALALVMHRTIFGRGVVRTAVL
TH_2010|M.thermoresistible__bu VQDSTFWQVAVNSVLIIVVTVLVSVLLGLGLALLLDRVFLGRGIVRTLLI
. . : : : : . :** * : : .. : :
MMAR_3617|M.marinum_M LPWICAPLAIAVMWRWILAPTDGAISTLLGRR--IEWLTDPDL---ALPV
MUL_1248|M.ulcerans_Agy99 LPWICAPLAIAVMWRWILAPTDGAISTLLGRR--IEWLTDPDL---ALPV
MAV_2090|M.avium_104 LPWICAPLAIAVLWRWILAPTDGAVSAVLGHS--IEWLSDPSF---ALPL
Mb2343|M.bovis_AF2122/97 LPWICAPLAIAVMWRWILAPTDGAISTVLGHR--IEWLTDPGL---ALPV
Rv2316|M.tuberculosis_H37Rv LPWICAPLAIAVMWRWIVAPTDGAISTVLGHR--IEWLTDPGL---ALPV
MLBr_01768|M.leprae_Br4923 LPWICAPLAIAVLWRWLLAPTDGAFSMVLRHR--IEWLSDPSL---ALPV
Mflv_3776|M.gilvum_PYR-GCK APMFITPIAVGLTFRFLLNDQLGAIPAMLHAIGIDYDFFGPGR---ALYT
Mvan_2623|M.vanbaalenii_PYR-1 APMFITPIAVGLTFRFLLNDQLGAIPAMLDAIGVEYDFFGPGR---ALFT
MSMEG_0554|M.smegmatis_MC2_155 LPLVTAPVLVGVAWKLLLAPVGGGLAGVFDSVG-LHGFNPLGSGTGAFVV
MAB_1373|M.abscessus_ATCC_1997 IPYGIVTVAASYSWYYAWTPGTGYLANLLPAG--SAPLTQQIP---SLAV
TH_2010|M.thermoresistible__bu TPFLVTPVAGALMWKTAMLDPVFGIVNWLLSPFGVHQVDWVSR--FPLTS
* ..: . : . : . .:
MMAR_3617|M.marinum_M VAAVVIWTNVGYVSLSFLAGLLAIPDDIHAAARTDGANAWQRFWRITLPM
MUL_1248|M.ulcerans_Agy99 VAAVVIWTNVGYVSLSFLAGLLAIPDDIHAAARTDGANAWQRFWRITLPM
MAV_2090|M.avium_104 VSAVVVWTNVGYVSLSFLAGLLAIPEDIHAAARTDGANAWQRFWRITMPM
Mb2343|M.bovis_AF2122/97 VSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPM
Rv2316|M.tuberculosis_H37Rv VSAVVVWTNVGYVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPM
MLBr_01768|M.leprae_Br4923 VSAVVVWTNVGYVSLSFLAGLLSIPEDINAAARTDGADAWQRFWRITLPM
Mflv_3776|M.gilvum_PYR-GCK LAFIDVWQWTPFMVLLLLAGLESIPKEPLDAARVDGARGLYVLRRVTLPL
Mvan_2623|M.vanbaalenii_PYR-1 LAFIDVWQWTPFMVLLLLAGLESIPKEPLDAARLDGASGLYVLRRVTLPL
MSMEG_0554|M.smegmatis_MC2_155 LLLIHIWQWTPFAVLIAFAALGVVRPELLESARIDGANSWRTFTTVTWPA
MAB_1373|M.abscessus_ATCC_1997 VILAEVWKTTPFMALLLLAGLALVPDDLLKAAQVDGANGWSRLIRVTVPI
TH_2010|M.thermoresistible__bu VMINLVWQWTPFMMLLILAGLQSMPRDILEAGRVDGAGTFQLFRELTLPH
: :* . : * :*.* : : :.: *** : :* *
MMAR_3617|M.marinum_M LRPTTFFVLVTGIVSAAQIFDIVYALTGGGPEG-STELVAHQIYAEAFG-
MUL_1248|M.ulcerans_Agy99 LRPTTFFVLVTGIVSAAQIFDIVYALTGGGPEG-STELVAHQIYAEAFG-
MAV_2090|M.avium_104 LRPTTFFVLVTGIVSSAQVFDTVYALTGGGPAG-STDLVAHRIYAEAFG-
Mb2343|M.bovis_AF2122/97 LRPTMFFVLVTGIISAAQVFDTVYALTGGGPQG-STDLVAHRIYAEAFG-
Rv2316|M.tuberculosis_H37Rv LRPTMFFVLVTGIISAAQVFDTVYALTGGGPQG-STDLVAHRIYAEAFG-
MLBr_01768|M.leprae_Br4923 LRPTMFFVLVTGIVSTAQVFDTVYALTDGGPKS-RTDLVAHRIYAEAFG-
Mflv_3776|M.gilvum_PYR-GCK LAPVLVVAILLRSLDAMKVFEYVFATTRGGPGT-ETETLQYFIYQTGIQ-
Mvan_2623|M.vanbaalenii_PYR-1 LAPVLVVAILLRCLDAMKVFEYVFATTRGGPGT-ETETLQYFIYQTGIQ-
MSMEG_0554|M.smegmatis_MC2_155 IAPTLLAVVLLELVIGYKVFDLIVVVTAGGPGF-STSLSPYVIYQTGLRG
MAB_1373|M.abscessus_ATCC_1997 MKPAILVALLFRTLDAFRIFDNIYVLTGGSNNTGSVSILGYDNLFKAFN-
TH_2010|M.thermoresistible__bu LRRFIELGAVLGAIYLVNTFDPIYMMTQGGPGT-ASSNLPFYIYQRAFL-
: : : . *: : * *. . . .:
MMAR_3617|M.marinum_M SAAIGRASVMAVVLFVILIGVTFVQHMYFRRRISYDLT---
MUL_1248|M.ulcerans_Agy99 SAAIGRASVMAVVLFVILIGVTFVQHMYFRRRISYDLT---
MAV_2090|M.avium_104 SAAIGRASVMAVVLFVILIGVTLVQHLYFRRRISYDLT---
Mb2343|M.bovis_AF2122/97 AAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT---
Rv2316|M.tuberculosis_H37Rv AAAIGRASVMAVVLFVILVGATVVQHLYFRRRISYELT---
MLBr_01768|M.leprae_Br4923 SAAIGRASVMAVLLFVVLFGVTVVQHLYFQRRISYELT---
Mflv_3776|M.gilvum_PYR-GCK FFRLGSASSMAFVVLIVVLAAIVFAFRRMDRAREAGIR---
Mvan_2623|M.vanbaalenii_PYR-1 FFRLGSASSMAFIVLVVVLAVIVIAFRRMERTKSR------
MSMEG_0554|M.smegmatis_MC2_155 SFDMGTAAAQTLVFGLVVGAVSTVVTTLRARALKGDG----
MAB_1373|M.abscessus_ATCC_1997 -VGLGSAISVLIFLCVAIIAVIFIKGFGASAPTTDGEEARR
TH_2010|M.thermoresistible__bu GFDIGQAAAMGVIVVIFTIIIATFALRLIFRSFTGKEEAA-
:* * ... : .