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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2010 | - | - | 100% (325) | sugar ABC transporter permease protein |
| M. thermoresistible (build 8) | TH_4307 | - | 4e-38 | 31.43% (280) | PUTATIVE binding-protein-dependent transport systems inner |
| M. thermoresistible (build 8) | TH_2990 | - | 6e-14 | 25.09% (271) | PUTATIVE sulfate ABC transporter, permease protein CysW |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2343 | uspA | 4e-35 | 33.70% (276) | sugar-transport integral membrane protein ABC transporter |
| M. gilvum PYR-GCK | Mflv_3776 | - | 6e-41 | 31.29% (278) | binding-protein-dependent transport systems inner membrane |
| M. tuberculosis H37Rv | Rv2835c | ugpA | 9e-35 | 31.39% (274) | sn-glycerol-3-phosphate transport integral membrane protein |
| M. leprae Br4923 | MLBr_01426 | - | 1e-34 | 29.97% (287) | putative ABC-transport protein, inner membrane component |
| M. abscessus ATCC 19977 | MAB_1373 | - | 5e-39 | 33.69% (282) | sugar ABC transporter, permease protein SugA |
| M. marinum M | MMAR_1898 | ugpA | 1e-35 | 31.39% (274) | SN-glycerol-3-phosphate transport integral membrane protein |
| M. avium 104 | MAV_1375 | sugA | 6e-35 | 32.55% (255) | ABC transporter, permease protein SugA |
| M. smegmatis MC2 155 | MSMEG_5573 | - | 1e-148 | 83.55% (310) | sugar ABC transporter permease protein |
| M. ulcerans Agy99 | MUL_2126 | ugpA | 8e-36 | 31.39% (274) | SN-glycerol-3-phosphate transport integral membrane protein |
| M. vanbaalenii PYR-1 | Mvan_2623 | - | 4e-40 | 30.58% (278) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2010|M.thermoresistible__bu MTAIAPGASEHLTGSEADRVARIKHAKQQGVSRAEGWRRRGPLLPALIFM
MSMEG_5573|M.smegmatis_MC2_155 MTTTEERASAEAA-AEAEHVARIKKTQDPGVSRAEGWRRRGPLLPALIFM
MAB_1373|M.abscessus_ATCC_1997 ----------------------MTDRTSSEGKRAERRLGLLLIAPAALLM
MAV_1375|M.avium_104 ----------------------MLGRTS------EQRLALVLVAPAAILM
Mflv_3776|M.gilvum_PYR-GCK -----------------------------------MKFQHGMVAPLVALF
Mvan_2623|M.vanbaalenii_PYR-1 -------------------------------MMPSLRFQHGMVAPLAALF
Mb2343|M.bovis_AF2122/97 ---------------------------MRDAPRRRTALAYALLAPSLVGV
MLBr_01426|M.leprae_Br4923 --------MTSVETTAVPEPSIAKNHASLPPSRRRAWAGRMFIAPNLASV
MMAR_1898|M.marinum_M -----------------MTTTRPRRNRS----WRDYALFVALVGPNLALL
MUL_2126|M.ulcerans_Agy99 -----------------MTTTRPRRNRS----WRDYALFVALVGPNLALL
Rv2835c|M.tuberculosis_H37Rv -----------------MAAPQRARLRSSKERVRDYALFVVLVGPNVALL
: * .
TH_2010|M.thermoresistible__bu IIVTQVPFLFTLYFSTLSWNLVRPGSREFVGFQNYVDVVQ-DSTFWQVAV
MSMEG_5573|M.smegmatis_MC2_155 IVVTQIPFLFTLYYSTLSWNLVRPGSREFVGLQNYVDVVQ-DATFWQAAF
MAB_1373|M.abscessus_ATCC_1997 LAVTAYPICYAIWLSVQKYSFASPQDRKFVWFDNYITVLS-DRYWWSALV
MAV_1375|M.avium_104 LAVTAYPIGYAVWLSLQRNNLAAPHDTAFVGLSNYATILS-DRYWWTALA
Mflv_3776|M.gilvum_PYR-GCK VGVVGFPLGYAAYLSVTDYKLTDQGAPDIVGADNFVATFG-DSGFWNAFG
Mvan_2623|M.vanbaalenii_PYR-1 VGVVGFPLGYAAYLSVTDYKLTDRGAPNLVGADNYVAAFS-DGAFWGAFG
Mb2343|M.bovis_AF2122/97 VAFLLLPILVVVWLSLHRWDLLGP--LRYVGLTNWRSVLT-DSGFADSLV
MLBr_01426|M.leprae_Br4923 SVFMLFPLGFSLYMSFQKWDMFTP--PVFVGLANFQNLFTSDPLFLIALC
MMAR_1898|M.marinum_M LLFVYRPLVDNIRLSFFDWNISDPT-AEFVGFSNYIEWFS-RPDTRQIVA
MUL_2126|M.ulcerans_Agy99 LLFVYRPLVDNIRLSFFDWNISDPT-AEFVGFSNYIEWFS-RPDTRQIVA
Rv2835c|M.tuberculosis_H37Rv LLFVYRPLADNIRLSFFDWNVSDPS-ARFVGLSNYTEWFT-RSDTRQIVF
. *: * .. * *: .
TH_2010|M.thermoresistible__bu NSVLIIVVTVLVSVLLGLGLALLLDRVFLGRGIVRTLLITPFLVTPVAGA
MSMEG_5573|M.smegmatis_MC2_155 NSVFFIVLTVLISVVLGLLLALLLDRVFLGRGVVRTLLITPFLVTPVAGA
MAB_1373|M.abscessus_ATCC_1997 VTLVITVISVLIELVLGLALALVMHRTIFGRGVVRTAVLIPYGIVTVAAS
MAV_1375|M.avium_104 VTLGITVVSVSAEFVLGLALALVMHRTLVGKGLVRTAVLIPYGIVTAVAS
Mflv_3776|M.gilvum_PYR-GCK TTALYVLVAVGLELVIGLAIALALQKQRWARDLTRSMLLAPMFITPIAVG
Mvan_2623|M.vanbaalenii_PYR-1 TTALYVLVAVGLELVIGLAIALALQKQRWAKDLTRSMLLAPMFITPIAVG
Mb2343|M.bovis_AF2122/97 VTAVFVAIVVPAQTVLGLLAASLLARRLPGTGLFRTLYVLPWICAPLAIA
MLBr_01426|M.leprae_Br4923 NSVVFTVGTVIPTVLISLVVAGVLNQKVKGIGIFRTIVFLPLAISSVVMA
MMAR_1898|M.marinum_M NTAIFTTAAVAGSMVLGLLLAMLLDQPLRGRNLVRSTVFAPFVISGAAVG
MUL_2126|M.ulcerans_Agy99 NTAIFTTAAVAGSMVLGLLLAMLLDQPLRGRNLVRSTVFAPFVISGAAVG
Rv2835c|M.tuberculosis_H37Rv NTAVFTGAAVVGSMVLGLALAMLLDRPLRGRNLVRSTVFAPFVISGAAVG
: * ::.* * : : . .: *: . * . .
TH_2010|M.thermoresistible__bu LMWKTAMLDPVFGIVNWLLSPFGVHQVDWVSRF--PLTSVMINLVWQWTP
MSMEG_5573|M.smegmatis_MC2_155 LMWKTAMLDPVFGFVNWLLPGGG---IDFIGEF--PRASIIVALVWQWTP
MAB_1373|M.abscessus_ATCC_1997 YSWY-YAWTPGTGYLANLLPAGSAPLTQQIP----SLAVVILAEVWKTTP
MAV_1375|M.avium_104 YSWY-YAWTPGTGYLANLLPHGSAPLTAQIP----SLAIVVLAEVWKTTP
Mflv_3776|M.gilvum_PYR-GCK LTFR-FLLNDQLGAIPAMLHAIGIDYDFFGPGR--ALYTLAFIDVWQWTP
Mvan_2623|M.vanbaalenii_PYR-1 LTFR-FLLNDQLGAIPAMLDAIGVEYDFFGPGR--ALFTLAFIDVWQWTP
Mb2343|M.bovis_AF2122/97 VMWR-WILAPTDGAISTVLGHR----IEWLTDPGLALPVVSAVVVWTNVG
MLBr_01426|M.leprae_Br4923 VVWQ-FIFNTHNGLLNIMLGWIGIGPIPWLVNPGWAMASLCIVSVWRSVP
MMAR_1898|M.marinum_M LAAQ-FVFDPHFGLVQDLLHRVGVNAPDFYQDTPWALFMVTVTYVWKNLG
MUL_2126|M.ulcerans_Agy99 LAAQ-FVFDPHFGLVQDLLHRVGVNAPDFYQDTPWALFMVTVTYVWKNLG
Rv2835c|M.tuberculosis_H37Rv LAAQ-FVFDPHFGLIQDLLRRIGVGVPDFYQDARWALFMVTITYVWKNLG
* : :* . : **
TH_2010|M.thermoresistible__bu FMMLLILAGLQSMPRDILEAGRVDGAGTFQLFRELTLPHLRRFIELGAVL
MSMEG_5573|M.smegmatis_MC2_155 FMMLLILAGLQSMPRDVLEAGRVDGANAFQLFRELTLPHLRRFIELGTVL
MAB_1373|M.abscessus_ATCC_1997 FMALLLLAGLALVPDDLLKAAQVDGANGWSRLIRVTVPIMKPAILVALLF
MAV_1375|M.avium_104 FMSLLLLAGLALVPEDLLKAAQVDGAGAWRRLTRVTLPIIKPAVVVALLF
Mflv_3776|M.gilvum_PYR-GCK FMVLLLLAGLESIPKEPLDAARVDGARGLYVLRRVTLPLLAPVLVVAILL
Mvan_2623|M.vanbaalenii_PYR-1 FMVLLLLAGLESIPKEPLDAARLDGASGLYVLRRVTLPLLAPVLVVAILL
Mb2343|M.bovis_AF2122/97 YVSLFFLAGLMAIPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVT
MLBr_01426|M.leprae_Br4923 FATVVLLAAMQEVPKTVYEAAKIDGAGEIRQFISITVPFIRGAISFVVVI
MMAR_1898|M.marinum_M YTCVIYLAALQGVRRDLLEAAEIDGASRWTSFRRVLLPQLRPTTFFLSIT
MUL_2126|M.ulcerans_Agy99 YTCVIYLAALQGVRRDLLEAAEIDGASRWTSFRRVLLPQLRPTTFFLSIT
Rv2835c|M.tuberculosis_H37Rv YTFVIYLAALQGVRRDLLEAAEIDGASRWAVFRRVLLPQLRPTTFFLSIT
: :. **.: : .*.. *** : : :* : . :
TH_2010|M.thermoresistible__bu GAIYLVNTFDPIYMMTQ---GGPGTASSNLPFYIYQRAFLGFDIGQAAAM
MSMEG_5573|M.smegmatis_MC2_155 GAIYLVNTFDQIYMMTQ---GGPGTASANLPFYIYQRAFLGFDIGQAAAM
MAB_1373|M.abscessus_ATCC_1997 RTLDAFRIFDNIYVLTG---GS--NNTGSVSILGYDNLFKAFNVGLGSAI
MAV_1375|M.avium_104 RTLDAFRIFDNIYVLTN---GA--NNTGSVSMLGYDNLFKGFNVGLGSAI
Mflv_3776|M.gilvum_PYR-GCK RSLDAMKVFEYVFATTR---GGPGTETETLQYFIYQTGIQFFRLGSASSM
Mvan_2623|M.vanbaalenii_PYR-1 RCLDAMKVFEYVFATTR---GGPGTETETLQYFIYQTGIQFFRLGSASSM
Mb2343|M.bovis_AF2122/97 GIISAAQVFDTVYALTG--GGPQGS-TDLVAHRIYAEAFGAAAIGRASVM
MLBr_01426|M.leprae_Br4923 SFIHAFQTFDLVYVLNGPNGGPELA-TYVLGIMLFQHAFSFLEFGYASAL
MMAR_1898|M.marinum_M VLINSLQVFDVINVMTR--GGPEGTGTTTMVYQVYLETFRNFRAGYGATI
MUL_2126|M.ulcerans_Agy99 VLINSLQVFDVINVMTR--GGPEGTGTTTMVYQVYLETFRNFRAGYGATI
Rv2835c|M.tuberculosis_H37Rv VLINSLQVFDVINVMTR--GGPEGTGTTTMVYQVYVETFRNFRAGYGATV
: . *: : . * : : : : * .: :
TH_2010|M.thermoresistible__bu GVIVVIFTIIIATFALRLIFRSFTGKEEAA---
MSMEG_5573|M.smegmatis_MC2_155 GVIVVIFTMIIATFALRLIFKSFSGAQEAA---
MAB_1373|M.abscessus_ATCC_1997 SVLIFLCVAIIAVIFIKGFGASAPTTDGEEARR
MAV_1375|M.avium_104 SVLIFGCVGLIALVFVKVFGAAAPGGD-VDGR-
Mflv_3776|M.gilvum_PYR-GCK AFVVLIVVLAAIVFAFRRMDRAREAGIR-----
Mvan_2623|M.vanbaalenii_PYR-1 AFIVLVVVLAVIVIAFRRMERTKSR--------
Mb2343|M.bovis_AF2122/97 AVVLFVILVGATVVQHLYFRRRISYELT-----
MLBr_01426|M.leprae_Br4923 ALVTFAILL-VLIVLQLLLNRRHSWEVSGGLS-
MMAR_1898|M.marinum_M ATMMFLFLLVVTYYQVRVMDRGQQQ--------
MUL_2126|M.ulcerans_Agy99 ATMMFLFLLVVTYYQVRVMDRGQQQ--------
Rv2835c|M.tuberculosis_H37Rv ATIMFLVLLAVTYYQVRVMDRGQRQ--------
. : . :