For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGDHRLPVVADVDVAVVGAGAAGVAAATVAAEAGLSVVVVEKYGFAGGAAVAGMSGTICGMYLASDSASR PERVVHGFTERFAGELTVRGGLTAPQRYGKTFTVAHDPLVWREVADDLMTAAGVRILYHTQVIDVLIEGD DYQGLVLASNAGVGVVRAARIIDASGDGAVVARAGGGYRFGDHGRIQNPTMFFRLGNVDLHAFWSAWGPN TISPQWVSDAIEQARTAGLDLPRNKIWIFDTTRPGELLVNATRLTAPDGRMLNVIDPADFTIAEVEGRRQ VRAYARFLAENVPGCGHAFVVDTGVEAGIRQTRTVDCIETLRDGDVVDGAKRDDSICRSPWPIELHDGEK PKLHWLLDDYYDVPYGALVPQRGENIIVAGRCLSAEHQALASARVTAQCFEYGHAAAVATALSLDRGTAY RDLDPAGIQARMIASGSALRTPQRQDVP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0481 | - | - | 100% (448) | FAD dependent oxidoreductase |
M. smegmatis MC2 155 | MSMEG_3987 | - | e-160 | 64.75% (434) | FAD dependent oxidoreductase |
M. smegmatis MC2 155 | MSMEG_1153 | - | 8e-41 | 27.95% (458) | FAD dependent oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3567 | - | 1e-06 | 54.17% (48) | 3-ketosteroid-delta-1-dehydrogenase |
M. gilvum PYR-GCK | Mflv_1519 | - | 2e-05 | 50.00% (46) | 3-ketosteroid-delta-1-dehydrogenase |
M. tuberculosis H37Rv | Rv3537 | - | 2e-06 | 54.17% (48) | 3-ketosteroid-delta-1-dehydrogenase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1646c | - | 4e-05 | 28.41% (176) | hypothetical protein MAB_1646c |
M. marinum M | MMAR_5024 | - | 5e-06 | 32.46% (114) | dehydrogenase |
M. avium 104 | MAV_2953 | - | 1e-05 | 27.73% (119) | 3-ketosteroid-delta-1-dehydrogenase |
M. thermoresistible (build 8) | TH_2036 | - | 4e-05 | 39.24% (79) | POSSIBLE ALANINE RICH DEHYDROGENASE |
M. ulcerans Agy99 | MUL_4098 | - | 3e-06 | 32.46% (114) | 3-ketosteroid-delta-1-dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_1580 | - | 3e-06 | 43.48% (69) | amine oxidase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5024|M.marinum_M ---MFYMTSQDYDVVVVGSGGAGMVAALAAAHKGLSTVVIEKAAHYGGST MUL_4098|M.ulcerans_Agy99 ------MTSQDYDVVVVGSGGAGMVAALAAAHKGLSTVVIEKAAHYGGST Mb3567|M.bovis_AF2122/97 ------MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVEKAPHYGGST Rv3537|M.tuberculosis_H37Rv ------MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVEKAPHYGGST Mflv_1519|M.gilvum_PYR-GCK ------MAQQEYDVVVVGSGAAGMVAALTAAHQGLSTIVVEKAPHYGGST MAV_2953|M.avium_104 -----MTWDRSVDMLIAGSGGGGMVAGLAALDSGLEPLIVEKQSLVGGST MSMEG_0481|M.smegmatis_MC2_155 MGDHRLPVVADVDVAVVGAGAAGVAAATVAAEAGLSVVVVEKYGFAGGAA MAB_1646c|M.abscessus_ATCC_199 --MIKPELPQGTTCAIAGGGPAGMMLALLLARAGIDVTVLEKHPDFLRDF TH_2036|M.thermoresistible__bu -----------MDVTVVGSGPNGLAAAVTCARAGLSVQVLEAQPTAGGGA Mvan_1580|M.vanbaalenii_PYR-1 -------------MVVVGGGIAGLAAATGLAERGVAVEVIEKHGYLGGRV :.*.* *: . *: ::* MMAR_5024|M.marinum_M ARSGG----GVWIPNNQILKRARVSDTTEAARTYLHGIIGDSSVSGVEPE MUL_4098|M.ulcerans_Agy99 ARSGG----GVWIPNNQILKRARVSDTTEAARTYLHGIIGDSSVSGVEPE Mb3567|M.bovis_AF2122/97 ARSGG----GVWIPNNEVLKRRGVRDTPEAARTYLHGIVG----EIVEPE Rv3537|M.tuberculosis_H37Rv ARSGG----GVWIPNNEVLKRRGVRDTPEAARTYLHGIVG----EIVEPE Mflv_1519|M.gilvum_PYR-GCK ARSGG----GVWIPNNEVLKRDGVKDTTEAARTYLHSIVG----DAVPAE MAV_2953|M.avium_104 GLSGG----IVWLPNNPLMRAEGVADSHQDGLAYLADVVGDIG-AASSPE MSMEG_0481|M.smegmatis_MC2_155 VAGMSGTICGMYLASDSASRPERVVHGFTERFAGELTVRG----GLTAPQ MAB_1646c|M.abscessus_ATCC_199 RGDT------VHASTLNLIDELGLGPRFAAMPHNLVEQVTVDLGEQTFRL TH_2036|M.thermoresistible__bu RTTADPEFEGIVHDVCSAVHPMALASPFMAEFDLPARGVR----LQVPAI Mvan_1580|M.vanbaalenii_PYR-1 GGWSD-----TLADGTPVAMNRGFHAFFRQYYNLRALLRRSDPGLSALTP . MMAR_5024|M.marinum_M RIDTYLERGPEMLSFVLEHTPLKMCWVPGYSDYYPEAPGGRSGGRSIEPK MUL_4098|M.ulcerans_Agy99 RIDTYLERGPEMLSFVLEHTPLKMCWVPGYSDYYSEAPGGRSGGRSIEPK Mb3567|M.bovis_AF2122/97 RIDAYLDRGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGRSIEPK Rv3537|M.tuberculosis_H37Rv RIDAYLDRGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGRSIEPK Mflv_1519|M.gilvum_PYR-GCK KIDTYLDRGPEMLSFVLKHSPLKLCWVPGYSDYYPETPGGKPTGRSVEPK MAV_2953|M.avium_104 RREMFLTAGHEMLNFLTRRG-VALIRCAGWSDYYPNHKGGNASGRAVEAV MSMEG_0481|M.smegmatis_MC2_155 RYGKTFTVAHDPLVWR---------------------------------- MAB_1646c|M.abscessus_ATCC_199 GDLNRLPGPHKHIAMAP--------------------------------- TH_2036|M.thermoresistible__bu SYANPLLDRPAAVAYRDLDR---------TCAELVNGHSWRRLFGPLTAR Mvan_1580|M.vanbaalenii_PYR-1 VEDYPLIDGAGRRDTFRG-------------------------------- : MMAR_5024|M.marinum_M PFDARKLGADMAELEPAYGKIPLNVVVMQQDYVRLNQLKRHPRGVLRSMK MUL_4098|M.ulcerans_Agy99 PFDARKLGADMAELEPAYGKIPLNVVVMQQDYVRLNQLKRHPRGVLRSMK Mb3567|M.bovis_AF2122/97 PFNARKLGADMAGLEPAYGKVPLNVVVMQQDYVRLNQLKRHPRGVLRSMK Rv3537|M.tuberculosis_H37Rv PFNARKLGADMAGLEPAYGKVPLNVVVMQQDYVRLNQLKRHPRGVLRSMK Mflv_1519|M.gilvum_PYR-GCK PFNAKKLGPDEKGLEPPYGKVPLNMVVMQQDYVRLNQLKRHPRGVLRSLK MAV_2953|M.avium_104 PFDAAKLGSWSGRVQPPLARN-YGYVVLTNELRSVQYFNRSARTFAVAAR MSMEG_0481|M.smegmatis_MC2_155 --EVADDLMTAAGVRILYHTQVIDVLIEGDDYQGLVLASNAGVGVVRAAR MAB_1646c|M.abscessus_ATCC_199 QWDFLEMLATAAETEPTFRLR------RSTEVTGLLRSGDRITGIEYRTA TH_2036|M.thermoresistible__bu DDGVLDLVMGDKRSIPSDPIAALQLGMRMLAQGSAAWGSLSGSDARALFS Mvan_1580|M.vanbaalenii_PYR-1 --LPQTPPLNALAFALRSPTFRLRDLVRLDAKAAAPLAAVSVPETYDLLD MMAR_5024|M.marinum_M VGARTMWAKATGKNLVGMGRALIGPLR---IGLQRKGVPVQLNTALTDLY MUL_4098|M.ulcerans_Agy99 VGARTMWAKATGKNLVGMGRALIGPLR---IGLQRKGVPVQLNTALTDLY Mb3567|M.bovis_AF2122/97 VGARTMWAKATGKNLVGMGRALIGPLR---IGLQRAGVPVELNTAFTDLF Rv3537|M.tuberculosis_H37Rv VGARTMWAKATGKNLVGMGRALIGPLR---IGLQRAGVPVELNTAFTDLF Mflv_1519|M.gilvum_PYR-GCK VGVRSVWANATGKNLVGMGRALIAPLR---IGLQKAGVPVLLNTALTDLH MAV_2953|M.avium_104 VFARTAAARMRRRQLLTNGASLIAHMLKALLDLSDGQPPLWTDAALTELV MSMEG_0481|M.smegmatis_MC2_155 IIDASGDGAVVAR--AGGGYRFGDHGR-----IQN--------------- MAB_1646c|M.abscessus_ATCC_199 SGETGALKADLTVACDGRGSALRAAAG----------------------- TH_2036|M.thermoresistible__bu GVAGHAISRMPSLISAGAGLLLATLAHTVGWPIPIGGSQRITDALIADLT Mvan_1580|M.vanbaalenii_PYR-1 GRDAETFLRDINFPEAARHLAFEVFAR----------------------- : MMAR_5024|M.marinum_M LEDGMVRGIYVRSTDAQESEEPQLIRARKGVILACGGFDHNEQMRVKYQR MUL_4098|M.ulcerans_Agy99 LEDGVVRGIYVRSTDAHESEEPQLIRARKGVILACGGFDHNEQMRVKYQR Mb3567|M.bovis_AF2122/97 VENGVVSGVYVRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRIKYQR Rv3537|M.tuberculosis_H37Rv VENGVVSGVYVRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRIKYQR Mflv_1519|M.gilvum_PYR-GCK VEDGVVTGIYVVATGDSVNAEPQLIRARRAVILGSGGFEHNEQMRVKYQR MAV_2953|M.avium_104 VEDGRVVGACIVRDGRACAVE-----ARKGVLLAAGGFGHNKQMRRRYSG MSMEG_0481|M.smegmatis_MC2_155 ----------------------------PTMFFRLGNVDLHAFWSAWGPN MAB_1646c|M.abscessus_ATCC_199 ----------------------------------MRPRQFGVPIDIWWFR TH_2036|M.thermoresistible__bu AHGG----------------------ELRVGEPVTRPPEGVVIYDTAPTA Mvan_1580|M.vanbaalenii_PYR-1 --------------------------SFFARPETLSAGELVTMFHIYFLG MMAR_5024|M.marinum_M -APITTDWTVGAKANTGDGIVAAEKLGAALDLMEDAWWGPTVPLVGRPWF MUL_4098|M.ulcerans_Agy99 -APITTDWTVGAKANTGDGIVAAEKLGAALDLMEDAWWGPTVPLVGRPWF Mb3567|M.bovis_AF2122/97 -APITTEWTVGASANTGDGILAAEKLGAALDLMDDAWWGPTVPLVGKPWF Rv3537|M.tuberculosis_H37Rv -APITTEWTVGASANTGDGILAAEKLGAALDLMDDAWWGPTVPLVGKPWF Mflv_1519|M.gilvum_PYR-GCK -APITTEWTVGAVANTGDGILAAEKLGAALEIMEDAWWGPTVPLEGAPWF MAV_2953|M.avium_104 DQPNEGQWSIANAGDTGEVLEAAMRLGAKTDLMDEAWWLPSVFIANGGAV MSMEG_0481|M.smegmatis_MC2_155 --TISPQWVSDAIEQART---------AGLDLPRNKIWIFDTTRPGELLV MAB_1646c|M.abscessus_ATCC_199 -LPKHPDDPQGPRARVGAN--------RFMVLLDRGDYFQCGYLIGKGTD TH_2036|M.thermoresistible__bu LLDIYGDALPARYARALRRYRFGPGVAKVDFVLSDEIPWQDPRLANAPTL Mvan_1580|M.vanbaalenii_PYR-1 SSEGLIFDVANANFDVALWNPLRRYLEGRGVVFHTGAEVDSVTVADEVTV . : . MMAR_5024|M.marinum_M ALSE---RNSPGSIIVNMSGQRFMNESMPYVEACHHMYGGQYGQGPGPGE MUL_4098|M.ulcerans_Agy99 ALSE---RNSPGSIIVNMSGQRFMNESMPYVEACHHMYGGQYGQGPGPGE Mb3567|M.bovis_AF2122/97 ALSE---RNSPGSIIVNMSGKRFMNESMPYVEACHHMYGGEHGQGPGPGE Rv3537|M.tuberculosis_H37Rv ALSE---RNSPGSIIVNMSGKRFMNESMPYVEACHHMYGGEHGQGPGPGE Mflv_1519|M.gilvum_PYR-GCK ALSE---RNSPGSIIVNMAGKRFMNESMPYVEACHHMYGGQYGQGPGPGE MAV_2953|M.avium_104 AASLGSGRQRPGAIYVDSTGRRFCNESNSYVEVGKAMY---------ANK MSMEG_0481|M.smegmatis_MC2_155 NATR---LTAPDGRMLNVIDP--ADFTIAEVEGRRQVR------------ MAB_1646c|M.abscessus_ATCC_199 SQMR--------SGDVQVLRDRVAEMAPWLAARTNAIAS----------- TH_2036|M.thermoresistible__bu HLGGS--REQMAHAEREIFADRHAEWPMTLASLPHLVDP-------GRVD Mvan_1580|M.vanbaalenii_PYR-1 TGSR----AQVWSADAAVLATDPGSLRRVVAASPGLGDPS----WRERVA . . MMAR_5024|M.marinum_M NIPAWLVFDQRYRDRYIFAG-----LQPGQRIPRKWLDSGVIVMADTLEE MUL_4098|M.ulcerans_Agy99 NIPAWLVFDQRYRDRYIFAG-----LQPGQRIPRKWLDSGVIVMADTLEE Mb3567|M.bovis_AF2122/97 NIPAWLVFDQRYRDRYIFAG-----LQPGQRIPSRWLDSGVIVQADTLAE Rv3537|M.tuberculosis_H37Rv NIPAWLVFDQRYRDRYIFAG-----LQPGQRIPSRWLDSGVIVQADTLAE Mflv_1519|M.gilvum_PYR-GCK NIPAWLIFDQQYRDRYIFAG-----LQPGQRIPSKWLESGVIVKADTLDE MAV_2953|M.avium_104 AVPCWMIFDDGYVRRYVTSANPLKTLRRHQPLPAELIESGAVKRAATIAG MSMEG_0481|M.smegmatis_MC2_155 ------AYARFLAENVPGCG------------HAFVVDTGVEAGIRQTRT MAB_1646c|M.abscessus_ATCC_199 -------WDDVKLLDIQLNR------------LRKWYRDGLLFIGDAAHA TH_2036|M.thermoresistible__bu GQGRRPLWSYVHVPAHSPVD-----------QTESVIKIFERFAPGFRDI Mvan_1580|M.vanbaalenii_PYR-1 AIGTAPPFVVLRLWLDRPVR----------HDRAAFVGTGGRDPLDNISV : MMAR_5024|M.marinum_M LAAKAGLPVDELTST-VSRFNGFARSGVDEDYHRGESAYDRYYGDPTNKP MUL_4098|M.ulcerans_Agy99 LAAKAGLPVDELTST-VSRFNGFARSGVDEDYHRGESAYDRYYGDPTNKP Mb3567|M.bovis_AF2122/97 LAGKAGLPADELTAT-VQRFNAFARSGVDEDYHRGESAYDRYYGDPSNKP Rv3537|M.tuberculosis_H37Rv LAGKAGLPADELTAT-VQRFNAFARSGVDEDYHRGESAYDRYYGDPSNKP Mflv_1519|M.gilvum_PYR-GCK LAARTGLPTDAFKAT-VDRFNGFARSGRDEDFKRGESAYDRYYGDPTNKP MAV_2953|M.avium_104 LAGETDLPADELARS-VERFNRFAAKGLDPDFGRGQSAYNDCLGDPGYRP MSMEG_0481|M.smegmatis_MC2_155 VDCIETLRDGDVVDG-AKRDDSICRSPWPIELHDGE----------KPKL MAB_1646c|M.abscessus_ATCC_199 MSPVGGVGINLAIAD-AVATARILAEPLR----------------TGTLT TH_2036|M.thermoresistible__bu VVAARCVPAARLADDNANYVGGDIAVGGNDTWRALAGPTPRLNPWSTPIP Mvan_1580|M.vanbaalenii_PYR-1 LERYEREAAQWCSRTGGSVVELHAYSVRDEDADVRDRLIARMHELYPETA : MMAR_5024|M.marinum_M NP-NLGEINHAPYYAAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYA MUL_4098|M.ulcerans_Agy99 NP-NLGEINHAPYYAAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYA Mb3567|M.bovis_AF2122/97 NP-NLGEVGHPPYYGAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYA Rv3537|M.tuberculosis_H37Rv NP-NLGEVGHPPYYGAKMVPGDLGTKGGIRTDVNGRALRDDGSIIDGLYA Mflv_1519|M.gilvum_PYR-GCK NP-NLGEITQGPFYAAKMVPGDLGTKGGIRTDVHGRALRDDGSVIEGLYA MAV_2953|M.avium_104 NA-AIGPLDTAPYYATRVFPADVGTCGGVITNEYAQVLDQHDRVIEGLYA MSMEG_0481|M.smegmatis_MC2_155 HW-LLDDYYDVPYGALVPQRGENIIVAGRCLSAEHQALAS-ARVTAQCFE MAB_1646c|M.abscessus_ATCC_199 TA-DLRKVQLRRWVPTALIQR-------IQRAVHRRVFSAVDSSTTAASN TH_2036|M.thermoresistible__bu RA-YQCSSATPPGPGVHGLAGYYAARTVLRREFGXXXGTATSSRTPTTYS Mvan_1580|M.vanbaalenii_PYR-1 TASIVAERLLRRDDCPRFAPGDFADRPTVSTPDPRLKLAGDGIRIDLPVA MMAR_5024|M.marinum_M AG-NVSAPVMGHTYPGPGGTIGPAMTFGYLAALHIAGDR----------- MUL_4098|M.ulcerans_Agy99 AG-NVSAPVMGHTYPGPGGTIGPAMTFGYLAALHIAGDR----------- Mb3567|M.bovis_AF2122/97 AG-NVSAPVMGHTYPGPGGTIGPAMTFGYLAALHIADQAGKR-------- Rv3537|M.tuberculosis_H37Rv AG-NVSAPVMGHTYPGPGGTIGPAMTFGYLAALHIADQAGKR-------- Mflv_1519|M.gilvum_PYR-GCK AG-NVSSPVMGHTYPGPGGTIGPAMTFGYLAALHIAGAAPAATSSSGKG- MAV_2953|M.avium_104 TG-NTTATVMGRTYPGAGASIANSMVFGYVAARHAAGRRIAGTPPRAIAG MSMEG_0481|M.smegmatis_MC2_155 YG-HAAAVATALSLDR-GTAYRDLDPAGIQARMIASGSALRTPQRQDVP- MAB_1646c|M.abscessus_ATCC_199 AK-IASVLSIATKYPWLQAVPAYGVAIGPLPEHAPDFARRSPID------ TH_2036|M.thermoresistible__bu ARRSEFGASYRRRFFALASFLRRGLLIAPTNSLVCNIEGRDRRELDR--- Mvan_1580|M.vanbaalenii_PYR-1 LMERAATTGWTAANELLTGFGLAGHTLHTVPNRGRSAVLRRLATSAGGVR MMAR_5024|M.marinum_M -------- MUL_4098|M.ulcerans_Agy99 -------- Mb3567|M.bovis_AF2122/97 -------- Rv3537|M.tuberculosis_H37Rv -------- Mflv_1519|M.gilvum_PYR-GCK -------- MAV_2953|M.avium_104 VPPRRVCD MSMEG_0481|M.smegmatis_MC2_155 -------- MAB_1646c|M.abscessus_ATCC_199 -------- TH_2036|M.thermoresistible__bu -------- Mvan_1580|M.vanbaalenii_PYR-1 --------