For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVEKAPHYGGSTARSGGGVWIPNNEVLKRRGVRDTPEA ARTYLHGIVGEIVEPERIDAYLDRGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGRSIEPKPFNA RKLGADMAGLEPAYGKVPLNVVVMQQDYVRLNQLKRHPRGVLRSMKVGARTMWAKATGKNLVGMGRALIG PLRIGLQRAGVPVELNTAFTDLFVENGVVSGVYVRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRIK YQRAPITTEWTVGASANTGDGILAAEKLGAALDLMDDAWWGPTVPLVGKPWFALSERNSPGSIIVNMSGK RFMNESMPYVEACHHMYGGEHGQGPGPGENIPAWLVFDQRYRDRYIFAGLQPGQRIPSRWLDSGVIVQAD TLAELAGKAGLPADELTATVQRFNAFARSGVDEDYHRGESAYDRYYGDPSNKPNPNLGEVGHPPYYGAKM VPGDLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNVSAPVMGHTYPGPGGTIGPAMTFGYLAALHIADQA GKR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3537 | - | - | 100% (563) | 3-ketosteroid-delta-1-dehydrogenase |
M. tuberculosis H37Rv | Rv1817 | - | 3e-27 | 25.66% (565) | hypothetical protein Rv1817 |
M. tuberculosis H37Rv | Rv0785 | - | 5e-07 | 40.30% (67) | putative FAD-binding dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3567 | - | 0.0 | 100.00% (563) | 3-ketosteroid-delta-1-dehydrogenase |
M. gilvum PYR-GCK | Mflv_1519 | - | 0.0 | 83.39% (560) | 3-ketosteroid-delta-1-dehydrogenase |
M. leprae Br4923 | MLBr_02387 | lpd | 6e-05 | 51.06% (47) | dihydrolipoamide dehydrogenase |
M. abscessus ATCC 19977 | MAB_0622c | - | 0.0 | 77.92% (557) | 3-ketosteroid-delta-1-dehydrogenase |
M. marinum M | MMAR_5024 | - | 0.0 | 87.88% (561) | dehydrogenase |
M. avium 104 | MAV_0624 | - | 0.0 | 89.09% (559) | 3-ketosteroid-delta-1-dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5941 | - | 0.0 | 82.86% (560) | 3-ketosteroid-delta-1-dehydrogenase |
M. thermoresistible (build 8) | TH_0368 | - | 0.0 | 82.73% (527) | PROBABLE DEHYDROGENASE |
M. ulcerans Agy99 | MUL_4098 | - | 0.0 | 87.88% (561) | 3-ketosteroid-delta-1-dehydrogenase |
M. vanbaalenii PYR-1 | Mvan_5237 | - | 0.0 | 83.66% (557) | 3-ketosteroid-delta-1-dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Rv3537|M.tuberculosis_H37Rv ---MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVEKAPHYGGSTARS Mb3567|M.bovis_AF2122/97 ---MTVQEFDVVVVGSGAAGMVAALVAAHRGLSTVVVEKAPHYGGSTARS MMAR_5024|M.marinum_M MFYMTSQDYDVVVVGSGGAGMVAALAAAHKGLSTVVIEKAAHYGGSTARS MUL_4098|M.ulcerans_Agy99 ---MTSQDYDVVVVGSGGAGMVAALAAAHKGLSTVVIEKAAHYGGSTARS MAV_0624|M.avium_104 ---MSAQEYDVVVVGSGGAGMVAALTAAHRGLSTIVIEKAPHFGGSTARS MSMEG_5941|M.smegmatis_MC2_155 ---MTGQEYDVVVVGSGAAGMVAALTAAHQGLSTVVVEKAPHYGGSTARS Mvan_5237|M.vanbaalenii_PYR-1 ---MTEQEYDVVVVGSGAAGMVAALTAAHQGLSTIVVEKAPHYGGSTARS Mflv_1519|M.gilvum_PYR-GCK ---MAQQEYDVVVVGSGAAGMVAALTAAHQGLSTIVVEKAPHYGGSTARS TH_0368|M.thermoresistible__bu ------------------------------------VEKAPHYGGSTARS MAB_0622c|M.abscessus_ATCC_199 ---MTEQEYDVVVVGSGGAGMVAALTAAHNGLSTVLIEKAPHFGGSTARS MLBr_02387|M.leprae_Br4923 -----MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAVVEPK-YWGGICLNV :* ::** . Rv3537|M.tuberculosis_H37Rv GGGVWIPNNEVLKRRGVRDTPEAARTYLHGIVG----EIVEPERIDAYLD Mb3567|M.bovis_AF2122/97 GGGVWIPNNEVLKRRGVRDTPEAARTYLHGIVG----EIVEPERIDAYLD MMAR_5024|M.marinum_M GGGVWIPNNQILKRARVSDTTEAARTYLHGIIGDSSVSGVEPERIDTYLE MUL_4098|M.ulcerans_Agy99 GGGVWIPNNQILKRARVSDTTEAARTYLHGIIGDSSVSGVEPERIDTYLE MAV_0624|M.avium_104 GGGVWIPNNEVLKRDGVKDTPEAARTYLHGIIG----DVVEPERIDTYLE MSMEG_5941|M.smegmatis_MC2_155 GGGVWIPNNEILKRDGVKDTPDEARKYLHAIIG----DVVPAEKIDTYLD Mvan_5237|M.vanbaalenii_PYR-1 GGGVWIPNNEVLKRDGVKDTADAARTYLHAIIG----DVVPAEKIDTYLQ Mflv_1519|M.gilvum_PYR-GCK GGGVWIPNNEVLKRDGVKDTTEAARTYLHSIVG----DAVPAEKIDTYLD TH_0368|M.thermoresistible__bu GGGVWIPNNEVLKRDGVTDTPEEARRYLHAIVG----DVVPAEKIDTYLD MAB_0622c|M.abscessus_ATCC_199 GGGVWIPNNEVLKKARQTDTPEAAREYLYSIIG----DVVPREKIDTYLD MLBr_02387|M.leprae_Br4923 G---CIPSKVLLHNAELAHIFTKEAKTFGISGDASFDYGIAYDRSRKVSE * **.: :*:. . : . : :: : Rv3537|M.tuberculosis_H37Rv RGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGRSIEPKPFNARKL Mb3567|M.bovis_AF2122/97 RGPEMLSFVLKHTPLKMCWVPGYSDYYPEAPGGRPGGRSIEPKPFNARKL MMAR_5024|M.marinum_M RGPEMLSFVLEHTPLKMCWVPGYSDYYPEAPGGRSGGRSIEPKPFDARKL MUL_4098|M.ulcerans_Agy99 RGPEMLSFVLEHTPLKMCWVPGYSDYYSEAPGGRSGGRSIEPKPFDARKL MAV_0624|M.avium_104 RGPEMLSFVLKHTPLKMCWVPRYSDYYPESPGGRAEGRSIEPKPFNARKL MSMEG_5941|M.smegmatis_MC2_155 RGPEMLSFVLKHSPLKLCWVPGYSDYYPETPGGKPTGRSVEPKPFDANKL Mvan_5237|M.vanbaalenii_PYR-1 RGPEMLSFVLKHSPLKLCWVPGYSDYYPETPGGKATGRSVEPKPFDAKKL Mflv_1519|M.gilvum_PYR-GCK RGPEMLSFVLKHSPLKLCWVPGYSDYYPETPGGKPTGRSVEPKPFNAKKL TH_0368|M.thermoresistible__bu RGPEMLSFVLKHTPLKLCWVPGYSDYYPETPGGKPTGRSVEPRPFDAKKL MAB_0622c|M.abscessus_ATCC_199 RGPEMLSFVLANSPLKLDWVPNYSDYYPEAPGGRAAGRSVEPKPFDAKKL MLBr_02387|M.leprae_Br4923 GRVAGVHFLMKKN--KITEIHGYGRFTDANTLSVELSEGVPETPL----- : *:: :. *: : *. : . . ...: *: Rv3537|M.tuberculosis_H37Rv GADMAGLEPAYGKVPLNVVVMQQDYVRLNQLKRHPRGVLRSMKVGARTMW Mb3567|M.bovis_AF2122/97 GADMAGLEPAYGKVPLNVVVMQQDYVRLNQLKRHPRGVLRSMKVGARTMW MMAR_5024|M.marinum_M GADMAELEPAYGKIPLNVVVMQQDYVRLNQLKRHPRGVLRSMKVGARTMW MUL_4098|M.ulcerans_Agy99 GADMAELEPAYGKIPLNVVVMQQDYVRLNQLKRHPRGVLRSMKVGARTMW MAV_0624|M.avium_104 GPDEAGLEPAYGKVPLNVVVMQQDYVRLNQLKRHPRGVLRSLKVGARTMW MSMEG_5941|M.smegmatis_MC2_155 GPDLKGLEPPYGKVPMNMVVMQQDYVRLNQLKRHPRGVLRSLKVGIRATW Mvan_5237|M.vanbaalenii_PYR-1 GEDLPGLEPPYGKVPMNMVVMQQDYVRLNQLKRHPRGVLRSLRVGIRSVW Mflv_1519|M.gilvum_PYR-GCK GPDEKGLEPPYGKVPLNMVVMQQDYVRLNQLKRHPRGVLRSLKVGVRSVW TH_0368|M.thermoresistible__bu GPDMDTLEPPYGKVPMNMVVMQQDYVRLNQLKRHPRGVLRSLKVGIRSMW MAB_0622c|M.abscessus_ATCC_199 GDELPNLEPPYGKVPLNVVVRQQDYVRLNQLKRHPRGVLRSLRVGVRTFW MLBr_02387|M.leprae_Br4923 ------------KVTFNNVIIATG--------SKTRLVPGTLLSTNVITY *:.:* *: . :.* * :: : Rv3537|M.tuberculosis_H37Rv AKATGKNLVGMGRALIGPLRIGLQRAGVPVELNTAFTDLFVENGVVSGVY Mb3567|M.bovis_AF2122/97 AKATGKNLVGMGRALIGPLRIGLQRAGVPVELNTAFTDLFVENGVVSGVY MMAR_5024|M.marinum_M AKATGKNLVGMGRALIGPLRIGLQRKGVPVQLNTALTDLYLEDGMVRGIY MUL_4098|M.ulcerans_Agy99 AKATGKNLVGMGRALIGPLRIGLQRKGVPVQLNTALTDLYLEDGVVRGIY MAV_0624|M.avium_104 AKATGKNLVGMGRALIGPLRIGLQRAGVPVVLNTALTDLYLEDGVVRGVY MSMEG_5941|M.smegmatis_MC2_155 GKVSGKNLVGMGRALIAPLRIGLREAGVPVLLNTALTDLYVEDGRVLGIY Mvan_5237|M.vanbaalenii_PYR-1 ANTTGKNLVGMGRALIAPLRIGLREAGVPVRLNTAMTDLYVEDGVVRGIY Mflv_1519|M.gilvum_PYR-GCK ANATGKNLVGMGRALIAPLRIGLQKAGVPVLLNTALTDLHVEDGVVTGIY TH_0368|M.thermoresistible__bu ANATGKNLVGMGRALIAPLRIGLREAGVPLLLNTAMTDLYVEDGVVRGIY MAB_0622c|M.abscessus_ATCC_199 AQGTGKKLVGMGRALSAALRIGLRDAGVPVKLNTALTDLYIEDGTVRGVY MLBr_02387|M.leprae_Br4923 EEQILTRELPDSIVIVGAGAIGIEFG---YVLKNYGVDVTIVEFLPRAMP : .. : . .: .. **:. *:. .*: : : .: Rv3537|M.tuberculosis_H37Rv VRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRIKYQRAPITTEWTVG Mb3567|M.bovis_AF2122/97 VRDSHEAESAEPQLIRARRGVILACGGFEHNEQMRIKYQRAPITTEWTVG MMAR_5024|M.marinum_M VRSTDAQESEEPQLIRARKGVILACGGFDHNEQMRVKYQRAPITTDWTVG MUL_4098|M.ulcerans_Agy99 VRSTDAHESEEPQLIRARKGVILACGGFDHNEQMRVKYQRAPITTDWTVG MAV_0624|M.avium_104 VRDSQAAESAEPRLIRARRGVILASGGFEHNEQMRVKYQRAPITTEWTVG MSMEG_5941|M.smegmatis_MC2_155 VRDTTAGDDAEPRLIRARHGVILGSGGFEHNEQMRVKYQRAPITTEWTVG Mvan_5237|M.vanbaalenii_PYR-1 VRDTTAPESAEPQLIRARRGVILGSGGFEHNEQMRVKYQRAPITTEWTVG Mflv_1519|M.gilvum_PYR-GCK VVATGDSVNAEPQLIRARRAVILGSGGFEHNEQMRVKYQRAPITTEWTVG TH_0368|M.thermoresistible__bu VVDARDPESAEPRLIRARRGVILGSGGFEHNEQMRVKYQRPPITTEWTVG MAB_0622c|M.abscessus_ATCC_199 VRETGAPEASEPTLIRGRRGVILASGGFEHNEQMRVKYQRAPITTEWTVG MLBr_02387|M.leprae_Br4923 NEDAEVSKEIEKQFKKMGIKILTG----TKVESISDNGSHVLVAVSKDGQ : * : : :: . : *.: : .: ::.. Rv3537|M.tuberculosis_H37Rv ASANTGDGILAAEKLGAALDLMDDAWWGPTVPLVGKPWFALSERNSPGSI Mb3567|M.bovis_AF2122/97 ASANTGDGILAAEKLGAALDLMDDAWWGPTVPLVGKPWFALSERNSPGSI MMAR_5024|M.marinum_M AKANTGDGIVAAEKLGAALDLMEDAWWGPTVPLVGRPWFALSERNSPGSI MUL_4098|M.ulcerans_Agy99 AKANTGDGIVAAEKLGAALDLMEDAWWGPTVPLVGRPWFALSERNSPGSI MAV_0624|M.avium_104 AKANTGDGILAAEKLGAALELMEDAWWGPTVPLVGAPWFALSERNSPGSI MSMEG_5941|M.smegmatis_MC2_155 AVANTGDGIVAAEKLGAALELMEDAWWGPTVPLVGAPWFALSERNSPGSI Mvan_5237|M.vanbaalenii_PYR-1 AKANTGDGILAAEKLGAALDVMEDAWWGPTVPLVDAPWFALSERNSPGSI Mflv_1519|M.gilvum_PYR-GCK AVANTGDGILAAEKLGAALEIMEDAWWGPTVPLEGAPWFALSERNSPGSI TH_0368|M.thermoresistible__bu AKANTGDGILAAEKLGAALEIMEDAWWGPTIPLPGAPWFALSERNSPGSI MAB_0622c|M.abscessus_ATCC_199 AKANTGDGILAAEKLGAALEFMEDSWWGPTVPLVGRPWFALSERNSPGSI MLBr_02387|M.leprae_Br4923 FQELKADKVLQAIGFAPNVDGYGLDKVG--VALTADKAVDIDDYMQTNVS ..* :: * :.. :: * :.* . :.: ... Rv3537|M.tuberculosis_H37Rv IVNMSGKRFMNESMPYVEACHHMYGGEHGQGPGPGENIPAWLVFDQRYRD Mb3567|M.bovis_AF2122/97 IVNMSGKRFMNESMPYVEACHHMYGGEHGQGPGPGENIPAWLVFDQRYRD MMAR_5024|M.marinum_M IVNMSGQRFMNESMPYVEACHHMYGGQYGQGPGPGENIPAWLVFDQRYRD MUL_4098|M.ulcerans_Agy99 IVNMSGQRFMNESMPYVEACHHMYGGQYGQGPGPGENIPAWLVFDQRYRD MAV_0624|M.avium_104 IVNMSGKRFMNESMPYVEACHHMYGGEYGQGPGPGENIPAWLVFDQQYRD MSMEG_5941|M.smegmatis_MC2_155 IVNMSGKRFMNESMPYVEACHHMYGGQYGQGPGPGENIPAWLIFDQQYRD Mvan_5237|M.vanbaalenii_PYR-1 IVNMAGKRFMNESMPYVEACHHMYGGQYGQGPGPGENIPAWLVFDQRYRD Mflv_1519|M.gilvum_PYR-GCK IVNMAGKRFMNESMPYVEACHHMYGGQYGQGPGPGENIPAWLIFDQQYRD TH_0368|M.thermoresistible__bu IVNMAGKRFMNESMPYVEACHHMYGGEYGQGPGPGENIPAWLIFDQRYRD MAB_0622c|M.abscessus_ATCC_199 IVNSSGKRFMNESLPYVEATHRMYGGQYGQGPGPGENLPAWLVFDQEYRN MLBr_02387|M.leprae_Br4923 HIYAIGDVTGKLQLAHVAEAQGVVAAEAIAG------AETLALSDYRMMP : *. : .:.:* : : ..: * : : * . Rv3537|M.tuberculosis_H37Rv RYIFAGLQPGQRIPSRWLDSGVIVQADTLAELAGKAGLPADELTATVQRF Mb3567|M.bovis_AF2122/97 RYIFAGLQPGQRIPSRWLDSGVIVQADTLAELAGKAGLPADELTATVQRF MMAR_5024|M.marinum_M RYIFAGLQPGQRIPRKWLDSGVIVMADTLEELAAKAGLPVDELTSTVSRF MUL_4098|M.ulcerans_Agy99 RYIFAGLQPGQRIPRKWLDSGVIVMADTLEELAAKAGLPVDELTSTVSRF MAV_0624|M.avium_104 RYIFAGLQPGQRIPRKWLESGVIIQAETLEELASKAGLPVDEFLATVQRF MSMEG_5941|M.smegmatis_MC2_155 RYIFAGLQPGQRIPSKWLESGVIVKADTLVELAEKTGLPADQFTSTIERF Mvan_5237|M.vanbaalenii_PYR-1 RYIFAGLQPGQRIPKKWLESGVIVKADTLEELAAKTGLPVDAFKTTVQRF Mflv_1519|M.gilvum_PYR-GCK RYIFAGLQPGQRIPSKWLESGVIVKADTLDELAARTGLPTDAFKATVDRF TH_0368|M.thermoresistible__bu RYLFAGLQPGQRIPKKWLDSGVIVKADTLAELAARIGVPEQDFLATVERF MAB_0622c|M.abscessus_ATCC_199 RYIFAGLQPGQKIPSKWIESGVIVKADTIEELAKKANLPVEELRATIERF MLBr_02387|M.leprae_Br4923 RATFCQPN-----VASFGLTEQQARDGGYDVVVAKFPFTANAKAHGMGDP * *. : : : :. : .. : : Rv3537|M.tuberculosis_H37Rv NAFARSGVDEDYHRGESAYDRYYGDPSNKPNPNLGEVGHPPYYGAKMVPG Mb3567|M.bovis_AF2122/97 NAFARSGVDEDYHRGESAYDRYYGDPSNKPNPNLGEVGHPPYYGAKMVPG MMAR_5024|M.marinum_M NGFARSGVDEDYHRGESAYDRYYGDPTNKPNPNLGEINHAPYYAAKMVPG MUL_4098|M.ulcerans_Agy99 NGFARSGVDEDYHRGESAYDRYYGDPTNKPNPNLGEINHAPYYAAKMVPG MAV_0624|M.avium_104 NGFARTGIDEDYHRGESAYDRYYGDPTNKPNPNLGEISHPPYYAAKMVPG MSMEG_5941|M.smegmatis_MC2_155 NGFARSGVDEDFHRGESAYDRYYGDPTNKPNPNLGEIKHGPFYAAKMVPG Mvan_5237|M.vanbaalenii_PYR-1 NGFARSGVDEDFKRGESAYDRYYGDPTNKPNPNLGEISQGPFYAAKMVPG Mflv_1519|M.gilvum_PYR-GCK NGFARSGRDEDFKRGESAYDRYYGDPTNKPNPNLGEITQGPFYAAKMVPG TH_0368|M.thermoresistible__bu NGFARAGVDQDFRRGESAYDRYYGDPTNKPNPNLGEIDQAPFYAAKMVPG MAB_0622c|M.abscessus_ATCC_199 NGFARSGVDEDFGRGKSAYDRYYGDPTNKPNPNLGALTKAPFYAAKMVPG MLBr_02387|M.leprae_Br4923 SGFVKLVADAKY--GELLGGHMIGHNVSELLPELTLAQKWDLTATELVR- ..*.: * .: *: .: *. .: *:* : .:::* Rv3537|M.tuberculosis_H37Rv DLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNVSAPVMGHTYPGPGGTIG Mb3567|M.bovis_AF2122/97 DLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNVSAPVMGHTYPGPGGTIG MMAR_5024|M.marinum_M DLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNVSAPVMGHTYPGPGGTIG MUL_4098|M.ulcerans_Agy99 DLGTKGGIRTDVNGRALRDDGSIIDGLYAAGNVSAPVMGHTYPGPGGTIG MAV_0624|M.avium_104 DLGTKGGIRTDIHGRALRDDGSIIEGLYAAGNVSAPVMGHTYPGPGGTIG MSMEG_5941|M.smegmatis_MC2_155 DLGTKGGIRTDVRGRALRDDDSVIEGLYAAGNVSSPVMGHTYPGPGGTIG Mvan_5237|M.vanbaalenii_PYR-1 DLGTKGGIVTDVQGRALRDDGSIIEGLYAAGNASAPVMGHTYPGPGGTIG Mflv_1519|M.gilvum_PYR-GCK DLGTKGGIRTDVHGRALRDDGSVIEGLYAAGNVSSPVMGHTYPGPGGTIG TH_0368|M.thermoresistible__bu DLGTKGGIRTDVHGRALRDDGSVIDGLYAAGNVSSPVMGHTYPGPGGTIG MAB_0622c|M.abscessus_ATCC_199 DLGTKGGVRTDVKGRVLRDDNSVIEGLYAAGNVSTPVMGHTYAGPGATIG MLBr_02387|M.leprae_Br4923 -------------------------NVHTHPTLSEALQECFH----GLIG .::: . * .: : . ** Rv3537|M.tuberculosis_H37Rv PAMTFGYLAALHIADQAGKR------- Mb3567|M.bovis_AF2122/97 PAMTFGYLAALHIADQAGKR------- MMAR_5024|M.marinum_M PAMTFGYLAALHIAGDR---------- MUL_4098|M.ulcerans_Agy99 PAMTFGYLAALHIAGDR---------- MAV_0624|M.avium_104 PAMTFGYLAALHIAGEN---------- MSMEG_5941|M.smegmatis_MC2_155 PAMTFGYLAALDIAATAAASRKG---- Mvan_5237|M.vanbaalenii_PYR-1 PAMTFGYLAALDIARKD---------- Mflv_1519|M.gilvum_PYR-GCK PAMTFGYLAALHIAGAAPAATSSSGKG TH_0368|M.thermoresistible__bu PAMTFGYLAALHVAGAA-TATSDPGKS MAB_0622c|M.abscessus_ATCC_199 PAMTWGYLAALDIAGK----------- MLBr_02387|M.leprae_Br4923 HMINF---------------------- :.: