For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAEPLAVDPARLIAAGSKLAELVFPAPPAPIAATGGDPVSAAINDTMPGIESLVSDGMPGVTAALKRTAS SMSTAADIYAKADQALGDALTQYQFGGDGQALGASGANAVAQSQAGQTVQSLAAPAAGLLGAPVAQALAA PATGLLGVPAAAATQIGEAVSAQAEALSPRVAATIPQLVQLAPQAGQMAQQASPIAQTISQSAQQGSSQG GAAPAQLVSDTKPDEDAELADETKEGEEDAMAAAGAEGAAAGHATLVSAPVESTGGGETSTGSVSAPI
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_5453 | - | - | 100% (278) | hypothetical protein MMAR_5453 |
| M. marinum M | MMAR_4352 | - | 2e-47 | 45.77% (284) | hypothetical protein MMAR_4352 |
| M. marinum M | MMAR_1328 | - | 1e-23 | 39.68% (189) | hypothetical protein MMAR_1328 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3908 | - | 4e-57 | 50.53% (281) | hypothetical protein Mb3908 |
| M. gilvum PYR-GCK | Mflv_0763 | - | 8e-15 | 26.94% (245) | hypothetical protein Mflv_0763 |
| M. tuberculosis H37Rv | Rv3878 | - | 2e-57 | 50.53% (281) | hypothetical protein Rv3878 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | MAV_0278 | - | 1e-05 | 26.38% (235) | hypothetical protein MAV_0278 |
| M. smegmatis MC2 155 | MSMEG_0069 | - | 4e-09 | 24.29% (247) | translation initiation factor IF-2 protein |
| M. thermoresistible (build 8) | TH_4387 | - | 5e-06 | 29.95% (207) | PUTATIVE putative PPE family protein |
| M. ulcerans Agy99 | MUL_4594 | - | 3e-46 | 45.42% (284) | hypothetical protein MUL_4594 |
| M. vanbaalenii PYR-1 | Mvan_0082 | - | 2e-15 | 29.79% (235) | hypothetical protein Mvan_0082 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5453|M.marinum_M ----------------------------MAEPLAVDPARLIAAGSKLAE-
MUL_4594|M.ulcerans_Agy99 ----------------------------MAEPLAVDPAGLGAVGTRLRG-
Mb3908|M.bovis_AF2122/97 ----------------------------MAEPLAVDPTGLSAAAAKLAG-
Rv3878|M.tuberculosis_H37Rv ----------------------------MAEPLAVDPTGLSAAAAKLAG-
Mflv_0763|M.gilvum_PYR-GCK ------------------------MVSGGLPPLSVDPTQLSAAGGALKSS
Mvan_0082|M.vanbaalenii_PYR-1 ------------------------MATGGTPPLSVDPEELSAAGGALLDS
MSMEG_0069|M.smegmatis_MC2_155 ----------------------------------------------MEAS
TH_4387|M.thermoresistible__bu ------------MGIMPDTSPYGGQTVTGPGWPNVDEDALGAAAAAYEAL
MAV_0278|M.avium_104 MAPSGEHRPENLGQAAVHAAAVATGNSATTLRQQVKNLNAHASGKTITEQ
MMAR_5453|M.marinum_M -LVFPAPPAP-----------------------------IAATGGDPVSA
MUL_4594|M.ulcerans_Agy99 -LVFPTPPAL-----------------------------IVAAGTDALSV
Mb3908|M.bovis_AF2122/97 -LVFPQPPAP-----------------------------IAVSGTDSVVA
Rv3878|M.tuberculosis_H37Rv -LVFPQPPAP-----------------------------IAVSGTDSVVA
Mflv_0763|M.gilvum_PYR-GCK ALDLPEAPAP-----------------------------FMPVGTDPLSV
Mvan_0082|M.vanbaalenii_PYR-1 ARELPQAPAP-----------------------------FNPVGTDPLSA
MSMEG_0069|M.smegmatis_MC2_155 ARAIPEPPDP-----------------------------FKTEGTDPLSK
TH_4387|M.thermoresistible__bu AAKLTGTVVPQQQGQMMQLSDTWEGSGATAAVGEASTIIAGHEANAAHAA
MAV_0278|M.avium_104 CELLTKQAGIAEKVSADLGIVAAALKIREDAARAWNRDAPKDSEIAAAKK
:. .
MMAR_5453|M.marinum_M AINDTMPGIESLVSDG------MPGVTAALKRTASSMSTAADIYAKADQ-
MUL_4594|M.ulcerans_Agy99 AINTAMPNIESSVTDL------LPSAKADMANTASSMATAADIYTKVDE-
Mb3908|M.bovis_AF2122/97 AINKTMPSIESLVSDG------LPGVKAALTRTASNMNAAADVYAKTDQ-
Rv3878|M.tuberculosis_H37Rv AINETMPSIESLVSDG------LPGVKAALTRTASNMNAAADVYAKTDQ-
Mflv_0763|M.gilvum_PYR-GCK AIIGQIPAIETPIATQ------LPLIKAEATTTASNVEDAAQAYAATDE-
Mvan_0082|M.vanbaalenii_PYR-1 AIIGQIPAVEAPIATQ------LPLIQAQATSTAQNVVSAAQVYAETDA-
MSMEG_0069|M.smegmatis_MC2_155 ALADKTWQVEAPFIEG------IGKTKAEAQETARRIQEAADKYEQSDR-
TH_4387|M.thermoresistible__bu AIAAKLRSMEAAVIKA------KTMANAVAVETQRECEAIAAAPFPNRQE
MAV_0278|M.avium_104 AVADAKKALMDASAASGDTSAASPKLEAAQKKLGELIRRRRDADKAYDAA
*: : *
MMAR_5453|M.marinum_M ------ALGDALTQYQFGGDGQALGASGANAVAQSQAGQTVQSLAAPAAG
MUL_4594|M.ulcerans_Agy99 ------SLGENLSQHQFRGSAPILTGS----TVTDQAGQFVQSMAT----
Mb3908|M.bovis_AF2122/97 ------SLGTSLSQYAFGSSGEGLAGV---ASVGGQPSQATQLLST----
Rv3878|M.tuberculosis_H37Rv ------SLGTSLSQYAFGSSGEGLAGV---ASVGGQPSQATQLLST----
Mflv_0763|M.gilvum_PYR-GCK ------QNSAAIDQVMQKTPSQMPSGSGG----SAPGGGADAAGQM----
Mvan_0082|M.vanbaalenii_PYR-1 ------RNGAAIHEQMQSRLDPLGTGSGGGSLPSTAGGGADSLGMP----
MSMEG_0069|M.smegmatis_MC2_155 ------TIAENLQSSTGRFDASTGTEG------TSQGGLQGLEQLQ----
TH_4387|M.thermoresistible__bu LLQSRIAMGLAQNVGQVTASSTELANTLGVPPTIPTAGGAPAAGAPGQEA
MAV_0278|M.avium_104 EKRADAKLKEISGQYAPHGGGRGHTADGTPETPAPSPGSPSPGAGSPSPG
.
MMAR_5453|M.marinum_M LLGAPVAQALAAPATGLLGVPAAAATQIGEAVSAQAEALSPRVAATIPQL
MUL_4594|M.ulcerans_Agy99 -----SAWQWADRAR------QGVETLI-DQLSPQISEVAAQVAEAGPQL
Mb3908|M.bovis_AF2122/97 -----------------------PVSQVTTQLGETAAELAPRVVATVPQL
Rv3878|M.tuberculosis_H37Rv -----------------------PVSQVTTQLGETAAELAPRVVATVPQL
Mflv_0763|M.gilvum_PYR-GCK ----------------------SQMMGMPMQMAQMPMQMMSGIASAPQGL
Mvan_0082|M.vanbaalenii_PYR-1 ----------------------MQMAG---QMAQMPMQVMGAVAAVPQGI
MSMEG_0069|M.smegmatis_MC2_155 ------------------------------QMMQMPMQAVQMAAQVPTQM
TH_4387|M.thermoresistible__bu AG-----------------DAAQQAAQLAGMAAQIPAQVGQMAGQVPQQL
MAV_0278|M.avium_104 TGKPSAGAPGKTASGTAKPSATPAATPSSTKPTETETKSGDDLSGLLTQL
:
MMAR_5453|M.marinum_M VQLAPQAGQMAQQASPIAQTISQSAQQ-----------------------
MUL_4594|M.ulcerans_Agy99 AQLGSQAAFVAQYASPMAQSIGQSTQQIVST-------------------
Mb3908|M.bovis_AF2122/97 VQLAPHAVQMSQNASPIAQTISQTAQQAAQS-------------------
Rv3878|M.tuberculosis_H37Rv VQLAPHAVQMSQNASPIAQTISQTAQQAAQS-------------------
Mflv_0763|M.gilvum_PYR-GCK MQGAQQASQQVQQMAGQFG-QGATGGSASSA-------------------
Mvan_0082|M.vanbaalenii_PYR-1 MQGAQQAGQQVQQMVGQFGDQGAKDGQKG---------------------
MSMEG_0069|M.smegmatis_MC2_155 AQMAAQVPQTVMQGVQQIGQMSGGTGQDSAG-------------------
TH_4387|M.thermoresistible__bu SQPLQQLSQPLQQITSLFGAVGGKGPGALNANPFSSLSN-----------
MAV_0278|M.avium_104 ASQQQQQPQSAQQAQPTAQATPAAATPQQQPEKDKDTAQGKASPLDRILG
. :
MMAR_5453|M.marinum_M -----------------------------------GSSQGGAAPAQ----
MUL_4594|M.ulcerans_Agy99 -----------------------------------ASQAGGAAPAQHG--
Mb3908|M.bovis_AF2122/97 -----------------------------------AQGGSGPMPAQLASA
Rv3878|M.tuberculosis_H37Rv -----------------------------------AQGGSGPMPAQLASA
Mflv_0763|M.gilvum_PYR-GCK -----------------------------------AQVPAPDAPAPEP--
Mvan_0082|M.vanbaalenii_PYR-1 -------------------------------------TPSGELPTAAN--
MSMEG_0069|M.smegmatis_MC2_155 -----------------------------------PAAPQTDSPVGKS--
TH_4387|M.thermoresistible__bu -----------------------------------HPLAGGSGPSGGAGM
MAV_0278|M.avium_104 ADGILDTGDLATLGVGAPLTLGGGSSHATPAAAVTPSAPASAAPSSTGLS
*
MMAR_5453|M.marinum_M ----------------------LVSDTKPDEDAELADETKEGEEDAMAAA
MUL_4594|M.ulcerans_Agy99 ---------------------LLVDDMKADD----ADD----ERDAKAGA
Mb3908|M.bovis_AF2122/97 EKPATEQ-------------AEPVHEVTNDDQGD-QGDVQPAEVVAAARD
Rv3878|M.tuberculosis_H37Rv EKPATEQ-------------AEPVHEVTNDDQGD-QGDVQPAEVVAAARD
Mflv_0763|M.gilvum_PYR-GCK -----------------------------------------ASEGAAAGE
Mvan_0082|M.vanbaalenii_PYR-1 -----------------------------------------REEGAAAAE
MSMEG_0069|M.smegmatis_MC2_155 ------------------------------KGGRERDDQQEQHEGAAADP
TH_4387|M.thermoresistible__bu VRAASLPG----------AGGSSPQTPLIANMLGGKVSPVSVDTGAAAGA
MAV_0278|M.avium_104 ASATANAQPVTSGTSAQGLHTSTDVTGRSGEPRSAFSVGPETKTSGASGA
. :
MMAR_5453|M.marinum_M GAEGAAAGHATLV---SAP---VESTGG-GETSTGSVSAPI---------
MUL_4594|M.ulcerans_Agy99 DGAGAAPGSQTLG---GAP---IEGGTG-TTADNQSAGPDVTVL------
Mb3908|M.bovis_AF2122/97 EGAGASPGQQPGG---GVPAQAMDTGAG-ARPAASPLAAPVDPSTPAPST
Rv3878|M.tuberculosis_H37Rv EGAGASPGQQPGG---GVPAQAMDTGAG-ARPAASPLAAPVDPSTPAPST
Mflv_0763|M.gilvum_PYR-GCK PDAERAPTPDERS---DRE----DTGAP-GRHRAAEADDRIDL-------
Mvan_0082|M.vanbaalenii_PYR-1 PHAERAPEPEEKT---DTD----GGQRP-GRHRAAESDERIEL-------
MSMEG_0069|M.smegmatis_MC2_155 AFTQQAPVTSQVP---GAAASEPEAGHSEGRPRANGTVPRPVPSDPAIVL
TH_4387|M.thermoresistible__bu TVVGAAPVAAGMGGGMGMAPGMMGARGTSGGTRPGIAAPEMLEHDLGEDE
MAV_0278|M.avium_104 TGTSAAPAHAAGTRPMGAGGMPMMPMGGMGGPAGGAGSSKDKESTTLASG
:. .
MMAR_5453|M.marinum_M ------------------------------------
MUL_4594|M.ulcerans_Agy99 ------------------------------------
Mb3908|M.bovis_AF2122/97 TTTL--------------------------------
Rv3878|M.tuberculosis_H37Rv TTTL--------------------------------
Mflv_0763|M.gilvum_PYR-GCK ------------------------------------
Mvan_0082|M.vanbaalenii_PYR-1 ------------------------------------
MSMEG_0069|M.smegmatis_MC2_155 ------------------------------------
TH_4387|M.thermoresistible__bu DDDW--------------------------------
MAV_0278|M.avium_104 SAESDLLHGRHTAAEAVPGGTIAQKDHPRRRGEDAA