For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AEPLAVDPAGLGAVGTRLRGLVFPTPPALIVAAGTDALSVAINTAMPNIESSVTDLLPSAKADMANTASS MATAADIYTKVDESLGENLSQHQFRGSAPILTGSTVTDQAGQFVQSMATSAWQWADRARQGVETLIDQLS PQISEVAAQVAEAGPQLAQLGSQAAFVAQYASPMAQSIGQSTQQIVSTASQAGGAAPAQHGLLVDDMKAD DADDERDAKAGADGAGAAPGSQTLGGAPIEGGTGTTADNQSAGPDVTVL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_4594 | - | - | 100% (260) | hypothetical protein MUL_4594 |
M. ulcerans Agy99 | MUL_2551 | - | 1e-21 | 35.64% (202) | hypothetical protein MUL_2551 |
M. ulcerans Agy99 | MUL_2554 | - | 1e-08 | 27.62% (239) | hypothetical protein MUL_2554 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3908 | - | 1e-43 | 40.29% (273) | hypothetical protein Mb3908 |
M. gilvum PYR-GCK | Mflv_0763 | - | 2e-13 | 30.51% (236) | hypothetical protein Mflv_0763 |
M. tuberculosis H37Rv | Rv3878 | - | 1e-43 | 40.29% (273) | hypothetical protein Rv3878 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4352 | - | 1e-139 | 97.69% (260) | hypothetical protein MMAR_4352 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0069 | - | 5e-09 | 28.36% (201) | translation initiation factor IF-2 protein |
M. thermoresistible (build 8) | TH_4343 | - | 7e-05 | 27.54% (69) | PUTATIVE - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MUL_4594|M.ulcerans_Agy99 ----MAEPLAVDPAGLGAVGTRLRG--LVFPTPPALIVAAGTDALSVAIN MMAR_4352|M.marinum_M ----MAEPLAVDPAGLGAAGTRLRG--LVFPTPPAPIVAAGTDALSVAIN Mb3908|M.bovis_AF2122/97 ----MAEPLAVDPTGLSAAAAKLAG--LVFPQPPAPIAVSGTDSVVAAIN Rv3878|M.tuberculosis_H37Rv ----MAEPLAVDPTGLSAAAAKLAG--LVFPQPPAPIAVSGTDSVVAAIN Mflv_0763|M.gilvum_PYR-GCK MVSGGLPPLSVDPTQLSAAGGALKSSALDLPEAPAPFMPVGTDPLSVAII MSMEG_0069|M.smegmatis_MC2_155 ---------------MEASAR-------AIPEPPDPFKTEGTDPLSKALA TH_4343|M.thermoresistible__bu --------MAIPELKVNESALHWDP--AEVMVPSVPAIPAGEDPMSQVVA : . . .. * *.: .: MUL_4594|M.ulcerans_Agy99 TAMPNIESSVTDLLPSAKADMANTASSMATAADIYTKVDESLGENLSQHQ MMAR_4352|M.marinum_M TAMPNIESSVTDLLPSAKADMANTASSMATAADIYTKVDESLGENLSQHQ Mb3908|M.bovis_AF2122/97 KTMPSIESLVSDGLPGVKAALTRTASNMNAAADVYAKTDQSLGTSLSQYA Rv3878|M.tuberculosis_H37Rv ETMPSIESLVSDGLPGVKAALTRTASNMNAAADVYAKTDQSLGTSLSQYA Mflv_0763|M.gilvum_PYR-GCK GQIPAIETPIATQLPLIKAEATTTASNVEDAAQAYAATDEQNSAAIDQVM MSMEG_0069|M.smegmatis_MC2_155 DKTWQVEAPFIEGIGKTKAEAQETARRIQEAADKYEQSDRTIAENLQSST TH_4343|M.thermoresistible__bu EALPGVAAKVTEMVAATRAQEAEFAANVAAAKQAYQRTDDTADQELKSAA : : . : :* * : * : * * :.. MUL_4594|M.ulcerans_Agy99 FRGSAPILTG-STVTDQAGQFVQSMATSAWQWADRARQGVETLIDQLSPQ MMAR_4352|M.marinum_M FRGSAPILTG-STVTDQAGQFVDSMATSAWQWADRARQGVETLIDQLSPQ Mb3908|M.bovis_AF2122/97 FGSSGEGLAGVASVGGQPSQATQLLSTP-----------VSQVTTQLGET Rv3878|M.tuberculosis_H37Rv FGSSGEGLAGVASVGGQPSQATQLLSTP-----------VSQVTTQLGET Mflv_0763|M.gilvum_PYR-GCK QKTPSQMPSGSGGSAPGGG---------------------ADAAGQMSQM MSMEG_0069|M.smegmatis_MC2_155 GRFDASTGTEGTSQGGLQG------------------------LEQLQQM TH_4343|M.thermoresistible__bu DAVYVPGAL----------------------------------------- MUL_4594|M.ulcerans_Agy99 ISEVAAQVAEAGPQLAQLGSQAAFVAQYASPMAQSIGQSTQQIVSTASQA MMAR_4352|M.marinum_M ISEVAAQVAEAGPQLAQLGSQAAFVAQYASPMAQSIGQSTQQIVSTASQA Mb3908|M.bovis_AF2122/97 AAELAPRVVATVPQLVQLAPHAVQMSQNASPIAQTISQTAQQAAQSAQGG Rv3878|M.tuberculosis_H37Rv AAELAPRVVATVPQLVQLAPHAVQMSQNASPIAQTISQTAQQAAQSAQGG Mflv_0763|M.gilvum_PYR-GCK MGMPMQMAQMPMQMMSGIASAPQGLMQGAQQASQQVQQMAGQFGQGATGG MSMEG_0069|M.smegmatis_MC2_155 MQMPMQAVQMAAQVPTQMAQMAAQVPQTVMQGVQQIGQMSGGTGQDSAGP TH_4343|M.thermoresistible__bu -------------------------------------------------- MUL_4594|M.ulcerans_Agy99 GGAAPAQHG----------LLVDDMKADDADDERDAK-------AGADGA MMAR_4352|M.marinum_M GGAAPAQHG----------LLVDDTKNDDADDDRDAK-------AGADGA Mb3908|M.bovis_AF2122/97 SGPMPAQLASAEKPATEQAEPVHEVTNDDQGDQGDVQPAEVVAAARDEGA Rv3878|M.tuberculosis_H37Rv SGPMPAQLASAEKPATEQAEPVHEVTNDDQGDQGDVQPAEVVAAARDEGA Mflv_0763|M.gilvum_PYR-GCK SASSAAQVP------------APDAPAPEPASEGAAA--------GEPDA MSMEG_0069|M.smegmatis_MC2_155 AAPQTDSPVG---------KSKGGRERDDQQEQHEGAAADPAFTQQAPVT TH_4343|M.thermoresistible__bu -------------------------------------------------- MUL_4594|M.ulcerans_Agy99 GAAPGSQTLGGAP---IEGGTGT---------TADNQSAGPDVTVL- MMAR_4352|M.marinum_M GAAPGSQTLGGAP---IEGGTGT---------TADNQSAGPDVTVL- Mb3908|M.bovis_AF2122/97 GASPGQQPGGGVPAQAMDTGAGARPAASPLAAPVDPSTPAPSTTTTL Rv3878|M.tuberculosis_H37Rv GASPGQQPGGGVPAQAMDTGAGARPAASPLAAPVDPSTPAPSTTTTL Mflv_0763|M.gilvum_PYR-GCK ERAPTPDERSDRE----DTGAPG-----------RHRAAEADDRIDL MSMEG_0069|M.smegmatis_MC2_155 SQVPGAAASEPEAG--HSEGRPRAN-------GTVPRPVPSDPAIVL TH_4343|M.thermoresistible__bu -----------------------------------------------